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Volumn 58, Issue 4, 2008, Pages 585-595

Detection of soil fungal communities in an alpine primary successional habitat: Does pooling of DNA extracts affect investigations?

Author keywords

Clone libraries; dsDNA; Fungi; Glacier forefront

Indexed keywords

FUNGI;

EID: 58149486224     PISSN: 15904261     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF03175562     Document Type: Article
Times cited : (10)

References (44)
  • 1
    • 0036866635 scopus 로고    scopus 로고
    • Identification of the sources of error in allele frequency estimations from pooled DNA indicates an optimal experimental design
    • Barratt B.J., Payne F., Rance H.E., Nutland S., Todd J.A., Clayton D.G. (2002). Identification of the sources of error in allele frequency estimations from pooled DNA indicates an optimal experimental design. Ann. Hum. Genet., 66: 393-405.
    • (2002) Ann. Hum. Genet , vol.66 , pp. 393-405
    • Barratt, B.J.1    Payne, F.2    Rance, H.E.3    Nutland, S.4    Todd, J.A.5    Clayton, D.G.6
  • 2
    • 34247575099 scopus 로고    scopus 로고
    • Research Coordination Networks: A phylogeny for kingdom Fungi (Deep Hypha)
    • Blackwell M., Hibbett D.S., Taylor J.W., Spatafora J.W. (2006). Research Coordination Networks: a phylogeny for kingdom Fungi (Deep Hypha). Mycologia, 98: 829-837.
    • (2006) Mycologia , vol.98 , pp. 829-837
    • Blackwell, M.1    Hibbett, D.S.2    Taylor, J.W.3    Spatafora, J.W.4
  • 3
    • 0024772711 scopus 로고
    • Key concepts: The results of a survey of our members' opinion
    • Cherrett J.M, Ed, Blackwell, Oxford, pp
    • Cherrett J.M. (1989). Key concepts: the results of a survey of our members' opinion. In: Cherrett J.M., Ed., Ecological Concepts, Blackwell, Oxford, pp. 1-161.
    • (1989) Ecological Concepts , pp. 1-161
    • Cherrett, J.M.1
  • 6
    • 0037721460 scopus 로고    scopus 로고
    • Multi-scale variation in spatial heterogeneity for microbial community structure in an eastern Virginia agricultural field
    • Franklin R.B., Mills A.L. (2003). Multi-scale variation in spatial heterogeneity for microbial community structure in an eastern Virginia agricultural field. FEMS Microbiol. Ecol., 44: 335-346.
    • (2003) FEMS Microbiol. Ecol , vol.44 , pp. 335-346
    • Franklin, R.B.1    Mills, A.L.2
  • 7
    • 0027580147 scopus 로고
    • ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts
    • Gardes M., Bruns T.D. (1993). ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts. Mol. Ecol., 2: 113-118.
    • (1993) Mol. Ecol , vol.2 , pp. 113-118
    • Gardes, M.1    Bruns, T.D.2
  • 8
    • 33645365767 scopus 로고    scopus 로고
    • Fine-scale distribution of pine ectomycorrttizas and their extramatrical mycelium
    • Genney D.R., Anderson I.C., Alexander I.J. (2006). Fine-scale distribution of pine ectomycorrttizas and their extramatrical mycelium. New Phytol., 170: 381-390.
    • (2006) New Phytol , vol.170 , pp. 381-390
    • Genney, D.R.1    Anderson, I.C.2    Alexander, I.J.3
  • 9
  • 10
    • 85036866780 scopus 로고    scopus 로고
    • Einfluss der Vegetation auf die mikrobielle Besiedlung des Gletschervorfeldes Rotmoosfemer
    • University of Hohenheim, Germany
    • Hammesfahr U. (2002). Einfluss der Vegetation auf die mikrobielle Besiedlung des Gletschervorfeldes Rotmoosfemer. In Institut für Landschafts- und Pflanzenökölogie, University of Hohenheim, Germany.
    • (2002) Institut für Landschafts- und Pflanzenökölogie
    • Hammesfahr, U.1
  • 11
    • 0002356691 scopus 로고
    • Evolution of the Ötztal-Stubai, Scarl-Campo and Ulten basement units
    • Raumer J.F, Neubauer M, Eds, Springer, Berlin
    • Hoinkes G., Thöni M. (1993). Evolution of the Ötztal-Stubai, Scarl-Campo and Ulten basement units. In: Raumer J.F., Neubauer M., Eds., Pre-Mesozoic Geology in the Alps, Springer, Berlin.
    • (1993) Pre-Mesozoic Geology in the Alps
    • Hoinkes, G.1    Thöni, M.2
  • 13
    • 0037714211 scopus 로고    scopus 로고
    • Soil fungal community assembly in a primary successional glacier forefront ecosystem as inferred from rDNA sequence analyses
    • Jumpponen A. (2003). Soil fungal community assembly in a primary successional glacier forefront ecosystem as inferred from rDNA sequence analyses. New Phytol., 158: 569-578.
    • (2003) New Phytol , vol.158 , pp. 569-578
    • Jumpponen, A.1
  • 14
    • 33745116868 scopus 로고    scopus 로고
    • The effect of sample size in studies of soil microbial community structure
    • Kang S., Mills A.L. (2006). The effect of sample size in studies of soil microbial community structure. J. Microbiol. Meth., 66: 242-250.
    • (2006) J. Microbiol. Meth , vol.66 , pp. 242-250
    • Kang, S.1    Mills, A.L.2
  • 15
    • 0034882364 scopus 로고    scopus 로고
    • Invertebrate succession on an Alpine glacier foreland
    • Kaufmann R. (2001). Invertebrate succession on an Alpine glacier foreland. Ecology, 82: 2261-2278.
    • (2001) Ecology , vol.82 , pp. 2261-2278
    • Kaufmann, R.1
  • 16
    • 0036932375 scopus 로고    scopus 로고
    • Glacier foreland colonisation: Distinguishing between short-term and long-term effects of climate change
    • Kaufmann R. (2002) Glacier foreland colonisation: distinguishing between short-term and long-term effects of climate change. Oecologia, 130: 470-475.
    • (2002) Oecologia , vol.130 , pp. 470-475
    • Kaufmann, R.1
  • 17
    • 0009510907 scopus 로고    scopus 로고
    • Diversity in primary succession: The chronosequence of a glacier foreland
    • Körner C, Spehn E, Eds, Parthenon, London, pp
    • Kaufmann R., Raffl C. (2002). Diversity in primary succession: The chronosequence of a glacier foreland. In: Körner C., Spehn E., Eds., Global Mountain Biodiversity: A Global Assessment, Parthenon, London, pp. 179-192.
    • (2002) Global Mountain Biodiversity: A Global Assessment , pp. 179-192
    • Kaufmann, R.1    Raffl, C.2
  • 18
    • 0036696822 scopus 로고    scopus 로고
    • The soil fauna of an Alpine glacier foreland: Colonization and succession
    • Kaufmann R., Fuchs M., Gosterxeier N. (2002). The soil fauna of an Alpine glacier foreland: Colonization and succession. Arct. Antarct. Alp. Res., 34: 242-250.
    • (2002) Arct. Antarct. Alp. Res , vol.34 , pp. 242-250
    • Kaufmann, R.1    Fuchs, M.2    Gosterxeier, N.3
  • 20
    • 33750063441 scopus 로고    scopus 로고
    • Disproportionate abundance between ectomycorrhizal root tips and their associated mycelia
    • Kjõller R. (2006) Disproportionate abundance between ectomycorrhizal root tips and their associated mycelia. FEMS Microbiol. Ecol., 58: 214-224.
    • (2006) FEMS Microbiol. Ecol , vol.58 , pp. 214-224
    • Kjõller, R.1
  • 23
    • 85036898777 scopus 로고    scopus 로고
    • McCune B, Mefford M.J, 1999, PC-Ord. Multivariate analysis of ecological data. Version 5.0. MjM Software, Gleneden Beach, Oregon, USA
    • McCune B., Mefford M.J. (1999). PC-Ord. Multivariate analysis of ecological data. Version 5.0. MjM Software, Gleneden Beach, Oregon, USA.
  • 25
    • 39549087438 scopus 로고    scopus 로고
    • Polygonum viviparum mycobionts on an alpine primary successional glacier forefront
    • Mühlmann O., Bacher M., Peintner U. (2008). Polygonum viviparum mycobionts on an alpine primary successional glacier forefront. Mycorrhiza, 18 (2): 87-95.
    • (2008) Mycorrhiza , vol.18 , Issue.2 , pp. 87-95
    • Mühlmann, O.1    Bacher, M.2    Peintner, U.3
  • 26
    • 42549163393 scopus 로고    scopus 로고
    • Mycobionts of Salix herbacea on a glacier forefront in the Austrian Alps
    • Mühlmann O., Peintner U. (2008a). Mycobionts of Salix herbacea on a glacier forefront in the Austrian Alps. Mycorrhiza, 18 (4): 171-180.
    • (2008) Mycorrhiza , vol.18 , Issue.4 , pp. 171-180
    • Mühlmann, O.1    Peintner, U.2
  • 27
    • 50649089589 scopus 로고    scopus 로고
    • Ectomycorrhiza of Kobresia myosuroides at a primary successional glacier forefront
    • in press. doi:10.1007/s00572-008-0188-z
    • Mühlmann O, Peintner U. (2008b). Ectomycorrhiza of Kobresia myosuroides at a primary successional glacier forefront. Mycorrhiza, in press. doi:10.1007/s00572-008-0188-z.
    • (2008) Mycorrhiza
    • Mühlmann, O.1    Peintner, U.2
  • 28
    • 33144455026 scopus 로고    scopus 로고
    • Only a few fungal species dominate highly diverse mycofloras associated with the common reed
    • Neubert K., Mendgen K., Brinkmann H., Wirsel S.G.R. (2006). Only a few fungal species dominate highly diverse mycofloras associated with the common reed. Appl. Environ. Microbiol., 72: 1118-1128.
    • (2006) Appl. Environ. Microbiol , vol.72 , pp. 1118-1128
    • Neubert, K.1    Mendgen, K.2    Brinkmann, H.3    Wirsel, S.G.R.4
  • 29
    • 14344252220 scopus 로고    scopus 로고
    • Primary succession of soil Crenarchaeota across a receding glacier foreland
    • Nicol G.W., Tscherko D., Embley T.M., Prosser J.I. (2005). Primary succession of soil Crenarchaeota across a receding glacier foreland. Environ. Microbiol., 7: 337-347.
    • (2005) Environ. Microbiol , vol.7 , pp. 337-347
    • Nicol, G.W.1    Tscherko, D.2    Embley, T.M.3    Prosser, J.I.4
  • 31
    • 33947097384 scopus 로고    scopus 로고
    • Soil fungal communities in a Castanea sativa (chestnut) forest producing large quantities of Boletus edulis sensu lato (porcini): Where is the mycelium of porcini?
    • Peintner U., Iotti M., Klotz P., Bonuso E., Zambonelli A. (2007). Soil fungal communities in a Castanea sativa (chestnut) forest producing large quantities of Boletus edulis sensu lato (porcini): where is the mycelium of porcini? Environ. Microbiol., 9: 880-889.
    • (2007) Environ. Microbiol , vol.9 , pp. 880-889
    • Peintner, U.1    Iotti, M.2    Klotz, P.3    Bonuso, E.4    Zambonelli, A.5
  • 32
    • 0028119337 scopus 로고
    • Moserella radicicola gen. et spec. nov., a new hypogeous species of Leotiales on ectomycorrhizae of Picea abies
    • Pöder R., Scheuer C. (1994). Moserella radicicola gen. et spec. nov., a new hypogeous species of Leotiales on ectomycorrhizae of Picea abies. Mycol. Res., 98: 1334-1338.
    • (1994) Mycol. Res , vol.98 , pp. 1334-1338
    • Pöder, R.1    Scheuer, C.2
  • 33
    • 85036875644 scopus 로고    scopus 로고
    • Raffl C. (1999). Vegetationsgradienten und Sukzessionsmuster in einem zentralalpinen Gletschervorfeld (Ötztaler Alpen, Tirol). In Department of Botany. Innsbruck, Austria: University of Innsbruck, Austria.
    • Raffl C. (1999). Vegetationsgradienten und Sukzessionsmuster in einem zentralalpinen Gletschervorfeld (Ötztaler Alpen, Tirol). In Department of Botany. Innsbruck, Austria: University of Innsbruck, Austria.
  • 34
    • 0242676205 scopus 로고    scopus 로고
    • Sampling strategy in molecular microbial ecology: Influence of soil sample size on DNA fingerprinting analysis of fungal and bacterial communities
    • Ranjard L., Lejon D.P.H., Mougel C., Schehrer L., Merdinoglu D., Chaussod R. (2003). Sampling strategy in molecular microbial ecology: influence of soil sample size on DNA fingerprinting analysis of fungal and bacterial communities. Environ. Microbiol., 5: 1111-1120.
    • (2003) Environ. Microbiol , vol.5 , pp. 1111-1120
    • Ranjard, L.1    Lejon, D.P.H.2    Mougel, C.3    Schehrer, L.4    Merdinoglu, D.5    Chaussod, R.6
  • 35
    • 0004244096 scopus 로고    scopus 로고
    • Schinner F, Öhlinger R, Kandeler E, Margesin R, Eds , Springer-Verlag, Berlin, Heidelberg
    • Schinner F., Öhlinger R., Kandeler E., Margesin R., Eds (1996). Methods in Soil Biology, Springer-Verlag, Berlin, Heidelberg.
    • (1996) Methods in Soil Biology
  • 38
    • 0036657601 scopus 로고    scopus 로고
    • Fungal diversity in ectomycorrhizal communities: Sampling effort and species detection
    • Taylor A.F.S. (2002). Fungal diversity in ectomycorrhizal communities: sampling effort and species detection. Plant Soil, 244: 19-28.
    • (2002) Plant Soil , vol.244 , pp. 19-28
    • Taylor, A.F.S.1
  • 39
    • 0344663987 scopus 로고    scopus 로고
    • Functional diversity of the soil microflora in primary succession across two glacier forelands in the Central Alps
    • Tscherko D., Rustemeier J., Richter A., Wanek W., Kandeler E. (2003). Functional diversity of the soil microflora in primary succession across two glacier forelands in the Central Alps. Eur. J. Soil Sci., 54: 685-696.
    • (2003) Eur. J. Soil Sci , vol.54 , pp. 685-696
    • Tscherko, D.1    Rustemeier, J.2    Richter, A.3    Wanek, W.4    Kandeler, E.5
  • 40
    • 22144446822 scopus 로고    scopus 로고
    • Plant succession and rhizosphere microbial communities in a recently deglaciated alpine terrain
    • Tscherko D., Hammesfahr U., Zeltner G., Kandeler E., Böcker R. (2005). Plant succession and rhizosphere microbial communities in a recently deglaciated alpine terrain. Basic Appl. Ecol., 6: 367-383.
    • (2005) Basic Appl. Ecol , vol.6 , pp. 367-383
    • Tscherko, D.1    Hammesfahr, U.2    Zeltner, G.3    Kandeler, E.4    Böcker, R.5
  • 41
    • 0141795524 scopus 로고    scopus 로고
    • Taxonomic misidentification in public DNA databases
    • Vilgalys R. (2003) Taxonomic misidentification in public DNA databases. New Phytol., 160: 4.
    • (2003) New Phytol , vol.160 , pp. 4
    • Vilgalys, R.1
  • 42
    • 0345195995 scopus 로고    scopus 로고
    • Determination of microbial diversity in environmental samples: Pitfalls of PCR-based rRNA analysis
    • von Wintzingerode F., Gobel U.B., Stackebrandt E. (1997). Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis. FEMS Microbiol. Rev., 21: 213-229.
    • (1997) FEMS Microbiol. Rev , vol.21 , pp. 213-229
    • von Wintzingerode, F.1    Gobel, U.B.2    Stackebrandt, E.3
  • 43
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • Michael A.I, Gelfand D.H, Sninsky J.J, White T.J, Eds, Academic Press, Inc, New York, pp
    • White T.J., Bruns T., Lee S., Taylor J. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Michael A.I., Gelfand D.H., Sninsky J.J., White T.J., Eds., PCR Protocols: A Guide to Methods and Applications, Academic Press, Inc., New York, pp. 315-322.
    • (1990) PCR Protocols: A Guide to Methods and Applications , pp. 315-322
    • White, T.J.1    Bruns, T.2    Lee, S.3    Taylor, J.4


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