Applying MAR analysis to identify human and non-human fecal sources in small Kentucky watersheds

Water, Air, and Soil Pollution

Volumn 196, Issue 1-4, 2009, Pages 115-125

  Ritchey, S A ^a   Coyne, M S ^b  

^a EASTERN KENTUCKY UNIVERSITY   (United States)

^b UNIVERSITY OF KENTUCKY   (United States)

Author keywords

Biosource tracking; Escherichia coli; Fecal coliforms; Fecal streptococci; Waste management; Watershed management

Indexed keywords

BEEF CATTLE; BEST MANAGEMENT PRACTICES; BIOSOURCE TRACKING; DAIRY CATTLE; E. COLI; FECAL BACTERIA; FECAL COLIFORMS; FECAL STREPTOCOCCI; HUMAN FECAL; HUMAN SOURCES; IMPAIRED WATERS; KENTUCKY; MANAGEMENT TOOLS; MICROBIAL SOURCE TRACKING; MULTIPLE ANTIBIOTIC RESISTANCES; NONPOINT SOURCE POLLUTIONS; POLLUTION SOURCES; WATER QUALITY IMPAIRMENTS; WATERSHED BASES; WATERSHED MANAGEMENT;

ANTIBIOTICS; BLOOD VESSEL PROSTHESES; DAIRIES; ELECTRIC CONDUCTIVITY MEASUREMENT; ESCHERICHIA COLI; LAND USE; LANDFORMS; MANAGEMENT; PATIENT MONITORING; QUALITY CONTROL; SOIL CONSERVATION; STRUCTURAL LOADS; SURFACE WATERS; WATER ANALYSIS; WATER CONSERVATION; WATER MANAGEMENT; WATER POLLUTION; WATER QUALITY; WATER RESOURCES; WATERSHEDS;

WASTE MANAGEMENT;

ANTIBIOTIC RESISTANCE; BEST MANAGEMENT PRACTICE; ENVIRONMENTAL RESTORATION; FECES; LAND USE; POLLUTANT SOURCE; RESOURCE ALLOCATION; SURFACE WATER; TRACKING; WASTE MANAGEMENT; WATER QUALITY;

KENTUCKY; NORTH AMERICA; UNITED STATES;

EID: 58149477893     PISSN: 00496979     EISSN: 15732932     Source Type: Journal    
DOI: 10.1007/s11270-008-9761-5     Document Type: Article

References (29)

1. APHA (1998). In L. S. Clesceri, et al. (Ed.), Standard methods for the examination of water and wastewater (20th ed.). Washington, DC: American Public Health Association.
2. U. Braga-Neto R. Hashimoto E. R. Dougherty D. V. Nguyen R. J. Carroll 2004 Is cross-validation better than resubstitution for ranking genes? Bioinformatics 20 253 258
3. C. A. Carson B. L. Shear M. R. Ellersieck A. Asfaw 2001 Identification of fecal Escherichia coli from humans and animal by ribotyping Applied and Environmental Microbiology 67 1503 1507
4. Current Protocols in Immunology Online (2004). Preparing frozen bacterial stocks. New York: Wiley. http://www.mrw2.interscience.wiley.com/cponline/ tserver.dll.
5. P. E. Dombek L. K. Johnson S. T. Zimmerly M. J. Sadowsky 2000 Use of repetitive DNA sequences and the PCR to differentiate Escherichia coli isolates from human and animal sources Applied and Environmental Microbiology 66 2572 2577
6. D. M. Gordon 2001 Geographical structure and host specificity in bacteria and the implications for tracing the source of coliform contamination Microbiology 147 1079 1085
7. A. K. Graves C. Hagedorn A. Teetor M. Mahal A. M. Booth R. B. Reneau 2002 Antibiotic resistance profiles to determine sources of fecal contamination in a rural Virginia watershed Journal of Environmental Quality 31 1300 1308
8. S. Guan R. Xu S. Chen J. Odumeru C. Gyles 2002 Development of a procedure for discriminating among Escherichia coli isolates from animal and human sources Applied Environmental Technology 68 2690 2698
9. C. Hagedorn S. L. Robinson J. R. Filtz S. M. Grubbs T. A. Angier R. B. Reneau 1999 Determining sources of fecal pollution in a rural Virginia watershed with antibiotic resistance patterns in fecal streptococci Applied and Environmental Microbiology 65 5522 5531
10. P. G. Hartel J. D. Summer J. L. Hill J. V. Collins J. A. Entry W. I. Segars 2002 Geographic variability of Escherichia coli ribotypes from animals in Idaho and Georgia Journal of Environmental Quality 31 1273 1278
11. V. J. Harwood J. Whitlock V. Withington 2000 Classification of antibiotic resistance patterns of indicator bacteria by discriminant analysis: Use in predicting the source of fecal contamination in subtropical waters Applied and Environmental Microbiology 66 3698 3704
12. L. K. Johnson M. B. Brown E. A. Carruthers J. A. Ferguson P. E. Dombek M. J. Sadowsky 2004 Sample size, library composition, and genotype diversity among natural populations of Escherichia coli from different animals influence accuracy of determining sources of fecal pollution Applied and Environmental Microbiology 70 4478 4485
13. Keeney, D. R., & Nelson, D. W. (1982). Nitrogen - Inorganic forms. In A. L. Page, et al. (Ed.), Methods of soil analysis, part 2 (p. 643). Madison, WI: ASA.
14. Z. Lu D. Lapen A. Scott A. Dang E. Topp 2005 Identifying host sources of fecal pollution: Diversity of Escherichia coli in confined dairy and swine production systems Applied and Environmental Microbiology 71 5992 5998
15. C. A. Carson S. L. McLellan A. D. Daniels A. K. Salmore 2003 Genetic characterization of Escherichia coli populations from host sources of fecal pollution by using DNA fingerprinting Applied and Environmental Microbiology 69 2587 2594
16. National Committee for Clinical Laboratory Standards (NCCLS) (2000). Approved standard M2-A7. Performance standards for antimicrobial disk susceptibility tests (7th ed.). Wayne, PA: NCCLS.
17. National Committee for Clinical Laboratory Standards (NCCLS) (2001). M100-S11 (M2). Disk diffusion eleventh informational supplement. Wayne, PA: NCCLS.
18. T. T. Ngo A. P. H. Phan C. F. Yam H. M. Lenhoff 1982 Interference in the determination of ammonia with the hypochlorite-alkaline phenol method of Berthelot Analytical Chemistry 54 46 49
19. M. Nieme M. Sibakov S Niemela 1983 Antibiotic resistance among different species of fecal coliforms isolated from water samples Applied and Environmental Microbiology 45 79 83
20. T. Ohno L. M. Zibilske 1991 Determination of low concentrations of phosphorus in soil extracts using malachite green Soil Science Society of America Journal 55 892 895
21. SAS Institute 1999 SAS/STAT user's guide version 8 SAS Institute Cary, NC SAS Institute (1999). SAS/STAT user's guide version 8. Cary, NC: SAS Institute (also available online at http://v8doc.sas.com/sashtml/ ; verified April 04, 2004).
22. T. M. Scott J. B. Rose T. M. Jenkins S. R. Farrah J. Lukasik 2002 Microbial source tracking: Current methodology and future directions Applied and Environmental Microbiology 68 5796 5803
23. J. M. Simpson J. W. Santo Domingo D. J. Reasoner 2002 Microbial source tracking: State of the science Environmental Science and Technology 36 5279 5288
24. D. M. Stoeckel M. V. Mathes K. E. Hyer C. Hagedorn H. Kator J. Lukasik 2004 Comparison of seven protocols to identify fecal contamination sources using Escherichia coli Environmental Science and Technology 38 6109 6117
25. US Environmental Protection Agency (USEPA) (2000). National water quality inventory: 2000 report. Washington, DC: USEPA, Office of Water. http://www.epa.gov/305b/2000report/.
26. P. P. Van Veldhoven G. P. Mannaerts 1987 Inorganic and organic phosphate measurements in the nanomolar range Analytical Biochemistry 161 45 48
27. M. W. Weatherburn 1967 Phenol-hypochlorite reaction for determination of ammonia Analytical Chemistry 39 971 974
28. J. E. Whitlock D. T. Jones V. J. Harwood 2002 Identification of the sources of fecal coliforms in an urban watershed using antibiotic resistance analysis Water Research 36 4273 4282
29. B. A. Wiggins R. W. Andrews R. A. Conway C. L. Corr E. J. Dobratz D. P. Dougherty 1999 Use of antibiotic resistance analysis to identify nonpoint sources of fecal pollution Applied and Environmental Microbiology 65 3483 3486