Toxicity phenotype does not correlate with phylogeny of Cylindrospermopsis raciborskii strains

Systematic and Applied Microbiology

Volumn 32, Issue 1, 2009, Pages 37-48

  Stucken, Karina ^a,b   Murillo, Alejandro A ^a,b   Soto Liebe, Katia ^a,b   Fuentes Valdés, Juan J ^a,b   Méndez, Marco A ^c   Vásquez, Mónica ^a,b  

^a Unidad de Reproduccion y Desarrollo   (Chile)

^b DEPARTAMENTO DE FÍSICA   (Chile)

^c UNIVERSITY OF CHILE   (Chile)

Author keywords

16S Rdna; Cylindrospermopsis raciborskii; ITS; lateral gene transfer; PFGE; Phylogeny

Indexed keywords

CYLINDROSPERMOPSIN; GENOMIC DNA; INTERNAL TRANSCRIBED SPACER; RNA 16S; RNA 23S;

ARTICLE; BACTERIAL GENE; BACTERIAL STRAIN; BIOSYNTHESIS; CONVERGENT EVOLUTION; CYLINDROSPERMOPSIS; CYLINDROSPERMOPSIS RACIBORSKII; GENE INACTIVATION; GENE LOCUS; GENE MUTATION; GENE SEQUENCE; GENE TRANSFER; GENETIC ASSOCIATION; LIVER TOXICITY; MONOPHYLY; NONHUMAN; NUCLEOTIDE SEQUENCE; OPERON; PHENOTYPE; PHYLOGENY; PHYLOGEOGRAPHY; PRIORITY JOURNAL; PULSED FIELD GEL ELECTROPHORESIS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM;

CYLINDROSPERMOPSIS; DNA, BACTERIAL; DNA, RIBOSOMAL SPACER; GENE TRANSFER, HORIZONTAL; MOLECULAR SEQUENCE DATA; PEPTIDE SYNTHASES; PHENOTYPE; PHYLOGENY; POLYKETIDE SYNTHASES; RNA, RIBOSOMAL, 16S; RNA, RIBOSOMAL, 23S; SAXITOXIN; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY; URACIL;

CYLINDROSPERMOPSIS RACIBORSKII;

EID: 58149339541     PISSN: 07232020     EISSN: 16180984     Source Type: Journal    
DOI: 10.1016/j.syapm.2008.10.002     Document Type: Article

References (37)

1. Ahlgren N.A., and Rocap G. Culture isolation and culture-independent clone libraries reveal new marine Synechococcus ecotypes with distinctive light and N physiologies. Appl. Environ. Microbiol. 72 (2006) 7193-7204
2. Alduina R., De Grazia S., Dolce L., Salerno P., Sosio M., Donadio S., and Puglia A.M. Artificial chromosome libraries of Streptomyces coelicolor A3(2) and Planobispora rosea. FEMS Microbiol. Lett. 218 (2003) 181-186
3. Ausubel F., Brent R., Kingston R., Seidman J., Smith J., and Struhl K. Current Protocols in Molecular Biology, Current Protocols vol. I (Supplement 27) (1994), Wiley, New York (pp. 2.4.1-2.4.2, Chapter II)
4. Bassam B.J., and Gresshoff P.M. Silver staining DNA in polyacrylamide gels. Nat. Protoc. 2 (2007) 2649-2654
5. Bisgard K.M., Christie C.D.C., Reising S.F., Sanden G.N., Cassiday P.K., Gomersall C., Wattigney W.A., Roberts N.E., and Strebel P.M. Molecular epidemiology of Bordetella pertussis by pulsed-field gel electrophoresis profile: Cincinnati, 1989-1996. J. Infect. Dis. 183 (2001) 1360-1367
6. Bourke A.T.C., Hawes R.B., Neilson A., and Stallman N.D. An outbreak of hepato-enteritis (the Palm Island mystery disease) possibly caused by algal intoxication. Toxicon 21 (1983) 45-48
7. Boyer S.L., Flechtner V.R., and Johansen J.R. Is the 16S-23S rRNA internal transcribed spacer region a good tool for use in molecular systematics and population genetics? A case study in cyanobacteria. Mol. Biol. Evol. 18 (2001) 1057-1069
8. Castro D., Vera D., Lagos N., García C., and Vásquez M. The effect of temperature on growth and production of paralytic shellfish poisoning toxins by the cyanobacterium Cylindrospermopsis raciborskii C10. Toxicon 44 (2004) 483-489
9. Chen X., and Widger W.R. Physical genome map of the unicellular cyanobacterium Synechococcus sp. strain PCC 7002. J. Bacteriol. 175 (1993) 5106-5116
10. Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39 (1985) 783-791
11. Frost L.S., Leplae R., Summers A.O., and Toussaint A. Mobile genetic elements: the agents of open source evolution. Nat. Rev. Genet. 3 (2005) 722-732
12. L. Fuenzalida, Genetic and physiologic studies in the cyanobacterium Cylindrospermopsis raciborskii, a PSP-toxin producer, Undergraduate thesis, Universidad de Chile, Santiago, Chile. 2005.
13. Griffiths D.J., and Saker M.L. The Palm Island mystery disease 20 years on: a review of research on the cyanotoxin cylindrospermopsin. Environ. Toxicol. 18 (2003) 78-93
14. Gugger M., Molica R., Le Berre B., Dufour P., Bernard C., and Humbert J.F. Genetic diversity of Cylindrospermopsis strains (Cyanobacteria) isolated from four continents. Appl. Environ. Microbiol. 71 (2005) 1097-1100
15. Hall T.A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT, Version 5.0.9, 2001,. Nucl. Acids Symp. Ser. 41 (1999) 95-98
16. Hashimoto J.G., Stevenson B.S., and Schmidt T.M. Rates and consequences of recombination between rRNA operons. J. Bacteriol. 185 (2003) 966-972
17. Hess W.R., Steglich C., Lichtlé C., and Partensky F. Phycoerythrins of the oxyphotobacterium Prochlorococcus marinus are associated to the thylakoid membranes and are encoded by a single large gene cluster. Plant Mol. Biol. 40 (1999) 507-521
18. Hobbie J.E., Daley R.J., and Jasper S. Use of nuclepore filters for counting bacteria by fluorescence microscopy. Appl. Environ. Microbiol. 33 (1977) 1225-1228
19. Istvánovics V., Shafik H.M., Présing M., and Juhos S. Growth and phosphate uptake kinetics of the cyanobacterium, Cylindrospermopsis raciborskii (Cyanophyceae) in throughflow cultures. Freshwater Biol. 43 (2000) 257-275
20. Iteman I., Rippka R., Tandeau de Marsae N., and Herdman M. Comparison of conserved structural and regulatory domains within divergent 16SrRNA-23SrRNA spacer sequences of cyanobacterial. Microbiology 146 (2000) 1275-1286
21. Kellmann R., Mills T., and Neilan B.A. Functional modeling and phylogenetic distribution of putative cylindrospermopsin biosynthesis enzymes. J. Mol. Evol. 62 (2006) 267-280
22. Kiss T., Vehovszky A., Hiripi L., Kovács A., and Vörös L. Membrane effects of toxins isolated from a cyanobacterium, Cylindrospermopsis raciborskii, on identified molluscan neurons. Comp. Biochem. Physiol. C Toxicol. Pharmacol. 131 (2002) 167-176
23. Lagos N., Onodera H., Zagatto P.A., Andrinolo D., Azevedo S.M.F.Q., and Oshima Y. The first evidence of paralytic shellfish toxins in the freshwater cyanobacterium Cylindrospermopsis raciborskii, isolated from Brazil. Toxicon 37 (1999) 1359-1373
24. Lane D.J., Pace B., and Olsen G.J. Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses. Proc. Natl. Acad. Sci. USA 20 (1985) 6955-6959
25. Lovett S.T., Gluckman T.J., Simon P.J., Sutera Jr. V.A., and Drapkin P.T. Recombination between repeats in Escherichia coli by a recA-independent, proximity sensitive mechanism. Mol. Gen. Genet. 245 (1994) 294-300
26. Mihali T.K., Kellmann R., Muenchhoff J., Barrow K.D., and Neilan B.A. Characterization of the gene cluster responsible for cylindrospermopsin biosynthesis. Appl. Environ. Microbiol. 74 (2008) 716-722
27. Neilan B.A., Jacobs D., Del Dot T., Blackall L.L., Hawkins P.R., Cox P.T., and Goodman A.E. rRNA sequences and evolutionary relationships among toxic and nontoxic cyanobacteria of the genus Microcystis. Int. J. Syst. Bacteriol. 47 (1997) 693-697
28. Neilan B.A., Saker M.L., Fastner J., Torokne A., and Burns B.P. Phylogeography of the invasive cyanobacterium Cylindrospermopsis raciborskii. Mol. Ecol. 12 (2003) 133-140
29. Nübel U., Garcia-Pichel F., and Muyzer G. PCR primers to amplify 16S rRNA genes from cyanobacteria. Appl. Environ. Microbiol. 63 (1997) 3327-3332
30. Padisák J. Cylindrospermopsis raciborskii (Woloszynska) Seenayya et Subba Raju, an expanding, highly adaptive cyanobacterium: worldwide distribution and review of its ecology. Arch. Hydrobiol. 107 (1997) 563-593
31. Posada D., and Crandall K.A. Modeltest: testing the model of DNA substitution. Bioinformatics 14 (1998) 917-918
32. M.L. Saker, Cyanobacterial blooms in tropical north Queensland water bodies. Ph.D. Thesis, James Cook University, Townsville, Australia. 2000.
33. Saker M.L., and Neilan B.A. Varied diazotrophies, morphologies, and toxicities of genetically similar isolates of Cylindrospermopsis raciborskii (Nostocales, Cyanophyceae) from northern Australia. Appl. Environ. Microbiol. 67 (2001) 1839-1845
34. Swofford D.L. PAUP*. Phylogenetic Analysis Using Parsimony (*and other Methods), version 4.0b 10 (2003), Sinauer Associates, Sunderland, Massachussets
35. Tillett D., Dittmann E., Erhard M., von Döhren H., Börner T., and Neilan B.A. Structural organization of microcystin biosynthesis in Microcystis aeruginosa PCC7806: an integrated peptide-polyketide synthetase system. Chem. Biol. 7 (2000) 753-764
36. Wang K., Hiruki C., and Yeh F. Molecular evolution of phytoplasmas based on polymorphisms in the 16S rRNA genes and the 16/23S spacer regions. Proc. Jpn. Acad. 79 (2003) 155-162
37. Woloszynska J. Das Phytoplankton einiger javanischer Seen mit Berücksichtigung des Sawa-Planktons. Bull. Int. Acad. Sci. Cracovie, Ser. B. 6 (1912) 649-709