CORE_TF: A user-friendly interface to identify evolutionary conserved transcription factor binding sites in sets of co-regulated genes

BMC Bioinformatics

Volumn 9, Issue , 2008, Pages

  Hestand, Matthew S ^a   Van Galen, Michiel ^a   Villerius, Michel P ^a   Van Ommen, Gert Jan B ^a   den Dunnen, Johan T ^a   't Hoen, Peter A C ^a  

^a LEIDEN UNIVERSITY MEDICAL CENTER   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING SITE PREDICTIONS; CO-REGULATED GENES; MICROARRAY DATA; POSITION WEIGHTS; REGULATED PROMOTERS; TRANSCRIPTION FACTOR BINDING SITES; UNIQUE FEATURES; USER FRIENDLY INTERFACE;

GENES; SET THEORY; TOOLS; TRANSCRIPTION FACTORS;

BINDING SITES;

CYTOSINE; GUANOSINE; TRANSCRIPTION FACTOR;

ACCESS TO INFORMATION; ALGORITHM; ARTICLE; BINDING SITE; CHROMATIN IMMUNOPRECIPITATION; COMPUTER INTERFACE; COMPUTER PROGRAM; GENE EXPRESSION REGULATION; GENETIC CONSERVATION; MICROARRAY ANALYSIS; PREDICTION; PROMOTER REGION; PROTEIN BINDING; PROTEIN CONTENT; PROTEIN DATABASE; ANIMAL; ARTIFICIAL INTELLIGENCE; CHEMISTRY; DNA BASE COMPOSITION; DNA MICROARRAY; GENETIC DATABASE; GENETICS; HUMAN; INTERNET; METABOLISM; METHODOLOGY; MOLECULAR EVOLUTION; SEQUENCE ALIGNMENT;

ALGORITHMS; ANIMALS; ARTIFICIAL INTELLIGENCE; BASE COMPOSITION; BINDING SITES; CHROMATIN IMMUNOPRECIPITATION; DATABASES, GENETIC; EVOLUTION, MOLECULAR; GENE EXPRESSION REGULATION; HUMANS; INTERNET; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PROMOTER REGIONS, GENETIC; SEQUENCE ALIGNMENT; SOFTWARE; TRANSCRIPTION FACTORS; USER-COMPUTER INTERFACE;

EID: 58149293009     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-9-495     Document Type: Article

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