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Volumn 118, Issue 2, 2009, Pages 327-338

Informative genomic microsatellite markers for efficient genotyping applications in sugarcane

Author keywords

[No Author keywords available]

Indexed keywords

AMPLICONS; FRAGMENT LENGTHS; GENETIC DIVERSITIES; GENOMIC LIBRARIES; GENOMIC SEQUENCES; GENOTYPING; MICRO SATELLITES; MICROSATELLITE MARKERS; MICROSATELLITE REPEATS; PCR AMPLIFICATIONS; PUBLIC DOMAINS; SACCHARUM COMPLEXES;

EID: 58149216103     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-008-0902-4     Document Type: Article
Times cited : (132)

References (35)
  • 1
    • 17444383490 scopus 로고    scopus 로고
    • A combination of AFLP and SSR markers provides extensive map coverage and identification of hom(oe)ologous linkage groups in sugarcane
    • KS Aitken PA Jackson CL McIntyre 2005 A combination of AFLP and SSR markers provides extensive map coverage and identification of hom(oe)ologous linkage groups in sugarcane Theor Appl Genet 110 789 801
    • (2005) Theor Appl Genet , vol.110 , pp. 789-801
    • Aitken, K.S.1    Jackson, P.A.2    McIntyre, C.L.3
  • 3
    • 0034649566 scopus 로고    scopus 로고
    • Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • Arabidopsis Genome Initiative
    • Arabidopsis Genome Initiative 2000 Analysis of the genome sequence of the flowering plant Arabidopsis thaliana Nature 408 796 815
    • (2000) Nature , vol.408 , pp. 796-815
  • 4
    • 0033976643 scopus 로고    scopus 로고
    • Transposable element contributions to plant genome evolution
    • JL Bennetzen 2000 Transposable element contributions to plant genome evolution Plant Mol Biol 42 251 269
    • (2000) Plant Mol Biol , vol.42 , pp. 251-269
    • Bennetzen, J.L.1
  • 5
    • 0034508740 scopus 로고    scopus 로고
    • An integrated SSR and RFLP linkage map of Sorghum bicolor (L.) Moench
    • D Bhattramakki J Dong K Chhabra GE Hart 2000 An integrated SSR and RFLP linkage map of Sorghum bicolor (L.) Moench Genome 43 988 1002
    • (2000) Genome , vol.43 , pp. 988-1002
    • Bhattramakki, D.1    Dong, J.2    Chhabra, K.3    Hart, G.E.4
  • 6
    • 0030827321 scopus 로고    scopus 로고
    • Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.)
    • X Chen S Temnykh Y Xu YG Cho SR McCouch 1997 Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.) Theor Appl Genet 95 553 567
    • (1997) Theor Appl Genet , vol.95 , pp. 553-567
    • Chen, X.1    Temnykh, S.2    Xu, Y.3    Cho, Y.G.4    McCouch, S.R.5
  • 9
    • 0034729727 scopus 로고    scopus 로고
    • Characterization of microsatellite markers from sugarcane (Saccharum spp.), a highly polyploid species
    • GM Cordeiro GO Taylor RJ Henry 2000 Characterization of microsatellite markers from sugarcane (Saccharum spp.), a highly polyploid species Plant Sci 155 161 168
    • (2000) Plant Sci , vol.155 , pp. 161-168
    • Cordeiro, G.M.1    Taylor, G.O.2    Henry, R.J.3
  • 10
    • 0035026747 scopus 로고    scopus 로고
    • Microsatellite markers from sugarcane (Saccharum spp.) ESTs cross-transferable to Erianthus and Sorghum
    • GM Cordeiro R Casu CL McIntyre JM Manners RJ Henry 2001 Microsatellite markers from sugarcane (Saccharum spp.) ESTs cross-transferable to Erianthus and Sorghum Plant Sci 160 1115 1123
    • (2001) Plant Sci , vol.160 , pp. 1115-1123
    • Cordeiro, G.M.1    Casu, R.2    McIntyre, C.L.3    Manners, J.M.4    Henry, R.J.5
  • 11
    • 0035986850 scopus 로고
    • Oligoclonal interspecific origin of 'North Indian' and 'Chinese' sugarcanes
    • A D'Hont F Paulet JC Glaszmann 1993 Oligoclonal interspecific origin of 'North Indian' and 'Chinese' sugarcanes Chromosome Res 10 253 262
    • (1993) Chromosome Res , vol.10 , pp. 253-262
    • D'Hont, A.1    Paulet, F.2    Glaszmann, J.C.3
  • 13
    • 0030015122 scopus 로고    scopus 로고
    • Microsatellite libraries enriched for several microsatellite sequences in plants
    • KJ Edwards JHA Barker A Daly C Jones A Karp 1996 Microsatellite libraries enriched for several microsatellite sequences in plants Biotechniques 20 758 760
    • (1996) Biotechniques , vol.20 , pp. 758-760
    • Edwards, K.J.1    Barker, J.H.A.2    Daly, A.3    Jones, C.4    Karp, A.5
  • 15
    • 84907150192 scopus 로고    scopus 로고
    • The map based sequence of rice genome
    • IRGSP
    • IRGSP (2005) The map based sequence of rice genome. Nature 436:793-800
    • (2005) Nature , vol.436 , pp. 793-800
  • 16
    • 0000210258 scopus 로고
    • Nouvelles recherché sur la distribution florale
    • P Jaccard 1908 Nouvelles recherché sur la distribution florale Bull Soc Vaudoise Sci Nat 44 223 270
    • (1908) Bull Soc Vaudoise Sci Nat , vol.44 , pp. 223-270
    • Jaccard, P.1
  • 17
    • 0030450464 scopus 로고    scopus 로고
    • Development of simple sequence repeat DNA markers and their integration into a barley linkage map
    • ZW Liu RB Biyashev MA Saghai-Maroof 1996 Development of simple sequence repeat DNA markers and their integration into a barley linkage map Theor Appl Genet 93 869 876
    • (1996) Theor Appl Genet , vol.93 , pp. 869-876
    • Liu, Z.W.1    Biyashev, R.B.2    Saghai-Maroof, M.A.3
  • 18
    • 0347579843 scopus 로고    scopus 로고
    • Micosatellites in Zea-variability, patterns of mutations, and uses for evolutionary studies
    • Y Matsuoka SE Mitchell S Kresovich M Goodman J Doebley 2002 Micosatellites in Zea-variability, patterns of mutations, and uses for evolutionary studies Theor Appl Genet 104 436 450
    • (2002) Theor Appl Genet , vol.104 , pp. 436-450
    • Matsuoka, Y.1    Mitchell, S.E.2    Kresovich, S.3    Goodman, M.4    Doebley, J.5
  • 19
    • 0036406542 scopus 로고    scopus 로고
    • Molecular diversity in Indian sugarcane cultivars as revealed by randomly amplified DNA polymorphisms
    • NV Nair A Selvi TV Srinivasan KN Pushpalatha 2002 Molecular diversity in Indian sugarcane cultivars as revealed by randomly amplified DNA polymorphisms Euphytica 127 219 225
    • (2002) Euphytica , vol.127 , pp. 219-225
    • Nair, N.V.1    Selvi, A.2    Srinivasan, T.V.3    Pushpalatha, K.N.4
  • 21
    • 0033848534 scopus 로고    scopus 로고
    • Isolation and mapping of microsatellite markers specific for the D genome of bread wheat
    • E Pestsova MW Ganal MS Roder 2000 Isolation and mapping of microsatellite markers specific for the D genome of bread wheat Genome 43 689 697
    • (2000) Genome , vol.43 , pp. 689-697
    • Pestsova, E.1    Ganal, M.W.2    Roder, M.S.3
  • 22
    • 11144273819 scopus 로고    scopus 로고
    • Survey in the sugarcane expressed sequence tag database (SUCEST) for simple sequence repeats
    • LR Pinto KM Oliveira EC Ulian AA Garcia AP deSouza 2004 Survey in the sugarcane expressed sequence tag database (SUCEST) for simple sequence repeats Genome 47 795 804
    • (2004) Genome , vol.47 , pp. 795-804
    • Pinto, L.R.1    Oliveira, K.M.2    Ulian, E.C.3    Garcia, A.A.4    Desouza, A.P.5
  • 23
    • 33746444258 scopus 로고    scopus 로고
    • Characterization of novel sugarcane expressed sequence tag microsatellites and their comparison with genomic SSRs
    • LR Pinto KM Oliveira T Marconi AAF Garcia EC Ulian AP deSouza 2006 Characterization of novel sugarcane expressed sequence tag microsatellites and their comparison with genomic SSRs Plant Breed 125 378 384
    • (2006) Plant Breed , vol.125 , pp. 378-384
    • Pinto, L.R.1    Oliveira, K.M.2    Marconi, T.3    Garcia, A.A.F.4    Ulian, E.C.5    Desouza, A.P.6
  • 27
    • 0035739802 scopus 로고    scopus 로고
    • Survey of transposable elements in sugarcane expressed sequence tags (ESTs)
    • M Rossi PG Araujo MV Sluys 2001 Survey of transposable elements in sugarcane expressed sequence tags (ESTs) Gen Mol Biol 24 147 154
    • (2001) Gen Mol Biol , vol.24 , pp. 147-154
    • Rossi, M.1    Araujo, P.G.2    Sluys, M.V.3
  • 29
    • 0041701439 scopus 로고    scopus 로고
    • Evaluation of maize microsatellite markers for genetic diversity analysis and fingerprinting in sugarcane
    • A Selvi NV Nair N Balasundaram T Mohapatra 2003 Evaluation of maize microsatellite markers for genetic diversity analysis and fingerprinting in sugarcane Genome 46 394 403
    • (2003) Genome , vol.46 , pp. 394-403
    • Selvi, A.1    Nair, N.V.2    Balasundaram, N.3    Mohapatra, T.4
  • 30
    • 25444468367 scopus 로고    scopus 로고
    • Genomic constitution and genetic relationship among the tropical and subtropical Indian sugarcane cultivars revealed by AFLP
    • A Selvi NV Nair JL Noyer NK Singh N Balasundaram KC Bansal KR Koundal T Mohapatra 2005 Genomic constitution and genetic relationship among the tropical and subtropical Indian sugarcane cultivars revealed by AFLP Crop Sci 45 1750 1757
    • (2005) Crop Sci , vol.45 , pp. 1750-1757
    • Selvi, A.1    Nair, N.V.2    Noyer, J.L.3    Singh, N.K.4    Balasundaram, N.5    Bansal, K.C.6    Koundal, K.R.7    Mohapatra, T.8
  • 32
    • 33746751494 scopus 로고    scopus 로고
    • Development of microsatellite markers and analysis of intraspecific genetic variability in chickpea (Cicer arietinum L.)
    • NK Sethy B Shokeen KJ Edwards S Bhatia 2006 Development of microsatellite markers and analysis of intraspecific genetic variability in chickpea (Cicer arietinum L.) Theor Appl Genet 112 1416 1428
    • (2006) Theor Appl Genet , vol.112 , pp. 1416-1428
    • Sethy, N.K.1    Shokeen, B.2    Edwards, K.J.3    Bhatia, S.4
  • 34
    • 0034882994 scopus 로고    scopus 로고
    • Computational and experimental analysis of microsatellites in rice (Oryza sativa L.): Frequency, length-variation, transposon associations and genetic marker potential
    • S Temnykh G Declerk A Lukashover L Lipovich S Cartinhour S McCouch 2001 Computational and experimental analysis of microsatellites in rice (Oryza sativa L.): frequency, length-variation, transposon associations and genetic marker potential Genome Res 11 1441 1452
    • (2001) Genome Res , vol.11 , pp. 1441-1452
    • Temnykh, S.1    Declerk, G.2    Lukashover, A.3    Lipovich, L.4    Cartinhour, S.5    McCouch, S.6
  • 35
    • 0003581979 scopus 로고    scopus 로고
    • Winboot: A program for performing bootstrap analysis of binary data to determine the confidence limits of UPGMA-based dendrograms
    • International Rice Research Institute, Manila, Philippines
    • Yap I, Nelson RJ (1996) Winboot: a program for performing bootstrap analysis of binary data to determine the confidence limits of UPGMA-based dendrograms. IRRI Discussion paper series no. 14. International Rice Research Institute, Manila, Philippines
    • (1996) IRRI Discussion Paper Series No. 14
    • Yap, I.1    Nelson, R.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.