-
1
-
-
0015329979
-
Infection of Escherichia coli by T2 and T4 bacteriophages as seen in the electron microscope: T4 head morphogenesis
-
Simon L.D. Infection of Escherichia coli by T2 and T4 bacteriophages as seen in the electron microscope: T4 head morphogenesis. Proc. Natl Acad. Sci. USA 69 (1972) 907-911
-
(1972)
Proc. Natl Acad. Sci. USA
, vol.69
, pp. 907-911
-
-
Simon, L.D.1
-
2
-
-
0029908793
-
The herpes simplex virus procapsid: structure, conformational changes upon maturation, and roles of the triplex proteins VP19c and VP23 in assembly
-
Trus B.L., Booy F.P., Newcomb W.W., Brown J.C., Homa F.L., Thomsen D.R., and Steven A.C. The herpes simplex virus procapsid: structure, conformational changes upon maturation, and roles of the triplex proteins VP19c and VP23 in assembly. J. Mol. Biol. 263 (1996) 447-462
-
(1996)
J. Mol. Biol.
, vol.263
, pp. 447-462
-
-
Trus, B.L.1
Booy, F.P.2
Newcomb, W.W.3
Brown, J.C.4
Homa, F.L.5
Thomsen, D.R.6
Steven, A.C.7
-
3
-
-
0030872369
-
Intermediates in the assembly pathway of the double-stranded RNA virus φ6
-
Butcher S.J., Dokland T., Ojala P.M., Bamford D.H., and Fuller S.D. Intermediates in the assembly pathway of the double-stranded RNA virus φ6. EMBO J. 16 (1997) 4477-4487
-
(1997)
EMBO J.
, vol.16
, pp. 4477-4487
-
-
Butcher, S.J.1
Dokland, T.2
Ojala, P.M.3
Bamford, D.H.4
Fuller, S.D.5
-
4
-
-
0002608842
-
The procapsid to capsid transition in double-stranded DNA bacteriophages
-
Chiu W., Burnett R.M., and Garcea R. (Eds), Oxford University Press, New York
-
King J., and Chiu W. The procapsid to capsid transition in double-stranded DNA bacteriophages. In: Chiu W., Burnett R.M., and Garcea R. (Eds). Structural Biology of Viruses (1997), Oxford University Press, New York 288-311
-
(1997)
Structural Biology of Viruses
, pp. 288-311
-
-
King, J.1
Chiu, W.2
-
6
-
-
0034625320
-
Large conformational changes in the maturation of a simple RNA virus, Nudaurelia capensis ω virus (NωV)
-
Canady M.A., Tihova M., Hanzlik T.N., Johnson J.E., and Yeager M. Large conformational changes in the maturation of a simple RNA virus, Nudaurelia capensis ω virus (NωV). J. Mol. Biol. 299 (2000) 573-584
-
(2000)
J. Mol. Biol.
, vol.299
, pp. 573-584
-
-
Canady, M.A.1
Tihova, M.2
Hanzlik, T.N.3
Johnson, J.E.4
Yeager, M.5
-
7
-
-
0034703226
-
Topologically linked protein rings in the bacteriophage HK97 capsid
-
Wikoff W.R., Liljas L., Duda R.L., Tsuruta H., Hendrix R.W., and Johnson J.E. Topologically linked protein rings in the bacteriophage HK97 capsid. Science 289 (2000) 2129-2133
-
(2000)
Science
, vol.289
, pp. 2129-2133
-
-
Wikoff, W.R.1
Liljas, L.2
Duda, R.L.3
Tsuruta, H.4
Hendrix, R.W.5
Johnson, J.E.6
-
8
-
-
0035957688
-
Virus maturation involving large subunit rotations and local refolding
-
Conway J.F., Wikoff W.R., Cheng N., Duda R.L., Hendrix R.W., Johnson J.E., and Steven A.C. Virus maturation involving large subunit rotations and local refolding. Science 292 (2001) 744-748
-
(2001)
Science
, vol.292
, pp. 744-748
-
-
Conway, J.F.1
Wikoff, W.R.2
Cheng, N.3
Duda, R.L.4
Hendrix, R.W.5
Johnson, J.E.6
Steven, A.C.7
-
9
-
-
33846262040
-
Capsid conformational sampling in HK97 maturation visualized by X-ray crystallography and cryo-EM
-
Gan L., Speir J.A., Conway J.F., Lander G., Cheng N., Firek B.A., et al. Capsid conformational sampling in HK97 maturation visualized by X-ray crystallography and cryo-EM. Structure 14 (2006) 1655-1665
-
(2006)
Structure
, vol.14
, pp. 1655-1665
-
-
Gan, L.1
Speir, J.A.2
Conway, J.F.3
Lander, G.4
Cheng, N.5
Firek, B.A.6
-
10
-
-
32544460955
-
Time-resolved molecular dynamics of bacteriophage HK97 capsid maturation interpreted by electron cryo-microscopy and X-ray crystallography
-
Wikoff W.R., Conway J.F., Tang J., Lee K.K., Gan L., Cheng N., et al. Time-resolved molecular dynamics of bacteriophage HK97 capsid maturation interpreted by electron cryo-microscopy and X-ray crystallography. J. Struct. Biol. 153 (2006) 300-306
-
(2006)
J. Struct. Biol.
, vol.153
, pp. 300-306
-
-
Wikoff, W.R.1
Conway, J.F.2
Tang, J.3
Lee, K.K.4
Gan, L.5
Cheng, N.6
-
11
-
-
0015897898
-
Mechanism of head assembly and DNA encapsulation in Salmonella phage P22: II. Morphogenetic pathway
-
King J., Lenk E.V., and Botstein D. Mechanism of head assembly and DNA encapsulation in Salmonella phage P22: II. Morphogenetic pathway. J. Mol. Biol. 80 (1973) 697-731
-
(1973)
J. Mol. Biol.
, vol.80
, pp. 697-731
-
-
King, J.1
Lenk, E.V.2
Botstein, D.3
-
12
-
-
0017892996
-
Adenovirus type 2 assembly analyzed by reversible cross-linking of labile intermediates
-
D'Halluin J.C., Martin G.R., Torpier G., and Boulanger P.A. Adenovirus type 2 assembly analyzed by reversible cross-linking of labile intermediates. J. Virol. 26 (1978) 357-363
-
(1978)
J. Virol.
, vol.26
, pp. 357-363
-
-
D'Halluin, J.C.1
Martin, G.R.2
Torpier, G.3
Boulanger, P.A.4
-
13
-
-
0023986450
-
Characterization of intranuclear capsids made by ts morphogenic mutants of HSV-1
-
Sherman G., and Bachenheimer S.L. Characterization of intranuclear capsids made by ts morphogenic mutants of HSV-1. Virology 163 (1988) 471-480
-
(1988)
Virology
, vol.163
, pp. 471-480
-
-
Sherman, G.1
Bachenheimer, S.L.2
-
14
-
-
0033039372
-
Mechanism of scaffolding-directed virus assembly suggested by comparison of scaffolding-containing and scaffolding-lacking P22 procapsids
-
Thuman-Commike P.A., Greene B., Malinski J.A., Burbea M., McGough A., Chiu W., and Prevelige Jr. P.E. Mechanism of scaffolding-directed virus assembly suggested by comparison of scaffolding-containing and scaffolding-lacking P22 procapsids. Biophys. J. 76 (1999) 3267-3277
-
(1999)
Biophys. J.
, vol.76
, pp. 3267-3277
-
-
Thuman-Commike, P.A.1
Greene, B.2
Malinski, J.A.3
Burbea, M.4
McGough, A.5
Chiu, W.6
Prevelige Jr., P.E.7
-
15
-
-
33846847658
-
Molecular dissection of φ29 scaffolding protein function in an in vitro assembly system
-
Fu C.Y., Morais M.C., Battisti A.J., Rossmann M.G., and Prevelige Jr. P.E. Molecular dissection of φ29 scaffolding protein function in an in vitro assembly system. J. Mol. Biol. 366 (2007) 1161-1173
-
(2007)
J. Mol. Biol.
, vol.366
, pp. 1161-1173
-
-
Fu, C.Y.1
Morais, M.C.2
Battisti, A.J.3
Rossmann, M.G.4
Prevelige Jr., P.E.5
-
16
-
-
0042326090
-
Mechanism of scaffolding-assisted viral assembly
-
Fane B.A., and Prevelige Jr. P.E. Mechanism of scaffolding-assisted viral assembly. Adv. Protein Chem. 64 (2003) 259-299
-
(2003)
Adv. Protein Chem.
, vol.64
, pp. 259-299
-
-
Fane, B.A.1
Prevelige Jr., P.E.2
-
17
-
-
0028969695
-
Structural transitions during bacteriophage HK97 head assembly
-
Duda R.L., Hempel J., Michel H., Shabanowitz J., Hunt D., and Hendrix R.W. Structural transitions during bacteriophage HK97 head assembly. J. Mol. Biol. 247 (1995) 618-635
-
(1995)
J. Mol. Biol.
, vol.247
, pp. 618-635
-
-
Duda, R.L.1
Hempel, J.2
Michel, H.3
Shabanowitz, J.4
Hunt, D.5
Hendrix, R.W.6
-
18
-
-
2442544585
-
Domain structures and roles in bacteriophage HK97 capsid assembly and maturation
-
Benevides J.M., Bondre P., Duda R.L., Hendrix R.W., and Thomas Jr. G.J. Domain structures and roles in bacteriophage HK97 capsid assembly and maturation. Biochemistry 43 (2004) 5428-5436
-
(2004)
Biochemistry
, vol.43
, pp. 5428-5436
-
-
Benevides, J.M.1
Bondre, P.2
Duda, R.L.3
Hendrix, R.W.4
Thomas Jr., G.J.5
-
19
-
-
33750844822
-
A free energy cascade with locks drives assembly and maturation of bacteriophage HK97 capsid
-
Ross P.D., Conway J.F., Cheng N., Dierkes L., Firek B.A., Hendrix R.W., et al. A free energy cascade with locks drives assembly and maturation of bacteriophage HK97 capsid. J. Mol. Biol. 364 (2006) 512-525
-
(2006)
J. Mol. Biol.
, vol.364
, pp. 512-525
-
-
Ross, P.D.1
Conway, J.F.2
Cheng, N.3
Dierkes, L.4
Firek, B.A.5
Hendrix, R.W.6
-
20
-
-
17044437232
-
Crosslinking renders bacteriophage HK97 capsid maturation irreversible and effects an essential stabilization
-
Ross P.D., Cheng N., Conway J.F., Firek B.A., Hendrix R.W., Duda R.L., and Steven A.C. Crosslinking renders bacteriophage HK97 capsid maturation irreversible and effects an essential stabilization. EMBO J. 24 (2005) 1352-1363
-
(2005)
EMBO J.
, vol.24
, pp. 1352-1363
-
-
Ross, P.D.1
Cheng, N.2
Conway, J.F.3
Firek, B.A.4
Hendrix, R.W.5
Duda, R.L.6
Steven, A.C.7
-
21
-
-
34248384340
-
A thermally induced phase transition in a viral capsid transforms the hexamers, leaving the pentamers unchanged
-
Conway J.F., Cheng N., Ross P.D., Hendrix R.W., Duda R.L., and Steven A.C. A thermally induced phase transition in a viral capsid transforms the hexamers, leaving the pentamers unchanged. J. Struct. Biol. 158 (2007) 224-232
-
(2007)
J. Struct. Biol.
, vol.158
, pp. 224-232
-
-
Conway, J.F.1
Cheng, N.2
Ross, P.D.3
Hendrix, R.W.4
Duda, R.L.5
Steven, A.C.6
-
22
-
-
0029864052
-
Structural transitions in the scaffolding and coat proteins of P22 virus during assembly and disassembly
-
Tuma R., Prevelige Jr. P.E., and Thomas Jr. G.J. Structural transitions in the scaffolding and coat proteins of P22 virus during assembly and disassembly. Biochemistry 35 (1996) 4619-4627
-
(1996)
Biochemistry
, vol.35
, pp. 4619-4627
-
-
Tuma, R.1
Prevelige Jr., P.E.2
Thomas Jr., G.J.3
-
23
-
-
0032493694
-
A helical coat protein recognition domain of the bacteriophage P22 scaffolding protein
-
Tuma R., Parker M.H., Weigele P., Sampson L., Sun Y., Krishna N.R., et al. A helical coat protein recognition domain of the bacteriophage P22 scaffolding protein. J. Mol. Biol. 281 (1998) 81-94
-
(1998)
J. Mol. Biol.
, vol.281
, pp. 81-94
-
-
Tuma, R.1
Parker, M.H.2
Weigele, P.3
Sampson, L.4
Sun, Y.5
Krishna, N.R.6
-
24
-
-
0038419606
-
Bacteriophage φ29 scaffolding protein gp7 before and after prohead assembly
-
Morais M.C., Kanamaru S., Badasso M.O., Koti J.S., Owen B.A., McMurray C.T., et al. Bacteriophage φ29 scaffolding protein gp7 before and after prohead assembly. Nat. Struct. Biol. 10 (2003) 572-576
-
(2003)
Nat. Struct. Biol.
, vol.10
, pp. 572-576
-
-
Morais, M.C.1
Kanamaru, S.2
Badasso, M.O.3
Koti, J.S.4
Owen, B.A.5
McMurray, C.T.6
-
25
-
-
0017294711
-
Accessible area, packing volumes and interaction surfaces of globular proteins
-
Teller D.C. Accessible area, packing volumes and interaction surfaces of globular proteins. Nature 260 (1976) 729-731
-
(1976)
Nature
, vol.260
, pp. 729-731
-
-
Teller, D.C.1
-
27
-
-
12344271844
-
Raman spectroscopy of proteins
-
Coligan J.E., Dunn B.M., Ploegh H.L., Speicher D.W., and Wingfield P.T. (Eds), John Wiley and Sons, New York
-
Benevides J.M., Overman S.A., and Thomas Jr. G.J. Raman spectroscopy of proteins. In: Coligan J.E., Dunn B.M., Ploegh H.L., Speicher D.W., and Wingfield P.T. (Eds). Current Protocols in Protein Science (2005), John Wiley and Sons, New York 17.8.1-17.8.35
-
(2005)
Current Protocols in Protein Science
-
-
Benevides, J.M.1
Overman, S.A.2
Thomas Jr., G.J.3
-
28
-
-
84986759513
-
Determination of the secondary structure of proteins from the Raman amide I band: the reference intensity profiles method
-
Berjot M., Marx J., and Alix A.J.P. Determination of the secondary structure of proteins from the Raman amide I band: the reference intensity profiles method. J. Raman Spectrosc. 18 (1987) 289-300
-
(1987)
J. Raman Spectrosc.
, vol.18
, pp. 289-300
-
-
Berjot, M.1
Marx, J.2
Alix, A.J.P.3
-
29
-
-
0031406242
-
Mechanisms of virus assembly probed by Raman spectroscopy: the icosahedral bacteriophage P22
-
Tuma R., and Thomas Jr. G.J. Mechanisms of virus assembly probed by Raman spectroscopy: the icosahedral bacteriophage P22. Biophys. Chem. 68 (1997) 17-31
-
(1997)
Biophys. Chem.
, vol.68
, pp. 17-31
-
-
Tuma, R.1
Thomas Jr., G.J.2
-
30
-
-
0033616633
-
Raman markers of nonaromatic side chains in an α-helix assembly: Ala, Asp, Glu, Gly, Ile, Leu, Lys, Ser, and Val residues of phage fd subunits
-
Overman S.A., and Thomas Jr. G.J. Raman markers of nonaromatic side chains in an α-helix assembly: Ala, Asp, Glu, Gly, Ile, Leu, Lys, Ser, and Val residues of phage fd subunits. Biochemistry 38 (1999) 4018-4027
-
(1999)
Biochemistry
, vol.38
, pp. 4018-4027
-
-
Overman, S.A.1
Thomas Jr., G.J.2
-
31
-
-
0028999261
-
Raman spectroscopy of the filamentous virus Ff (fd, fl, M13): structural interpretation for coat protein aromatics
-
Overman S.A., and Thomas Jr. G.J. Raman spectroscopy of the filamentous virus Ff (fd, fl, M13): structural interpretation for coat protein aromatics. Biochemistry 34 (1995) 5440-5451
-
(1995)
Biochemistry
, vol.34
, pp. 5440-5451
-
-
Overman, S.A.1
Thomas Jr., G.J.2
-
32
-
-
0021095333
-
Structure similarity, difference and variability in the filamentous viruses fd, If1, IKe, Pf1 and Xf. Investigation by laser Raman spectroscopy
-
Thomas Jr. G.J., Prescott B., and Day L.A. Structure similarity, difference and variability in the filamentous viruses fd, If1, IKe, Pf1 and Xf. Investigation by laser Raman spectroscopy. J. Mol. Biol. 165 (1983) 321-356
-
(1983)
J. Mol. Biol.
, vol.165
, pp. 321-356
-
-
Thomas Jr., G.J.1
Prescott, B.2
Day, L.A.3
-
33
-
-
0023671571
-
Ultraviolet resonance Raman spectroscopy as a probe of protein structure in the fd virus
-
Grygon C.A., Perno J.R., Fodor S.P., and Spiro T.G. Ultraviolet resonance Raman spectroscopy as a probe of protein structure in the fd virus. Biotechniques 6 (1988) 50-55
-
(1988)
Biotechniques
, vol.6
, pp. 50-55
-
-
Grygon, C.A.1
Perno, J.R.2
Fodor, S.P.3
Spiro, T.G.4
-
34
-
-
14344262928
-
Structural characterization of the filamentous bacteriophage PH75 from Thermus thermophilus by Raman and UV-resonance Raman spectroscopy
-
Overman S.A., Bondre P., Maiti N.C., and Thomas Jr. G.J. Structural characterization of the filamentous bacteriophage PH75 from Thermus thermophilus by Raman and UV-resonance Raman spectroscopy. Biochemistry 44 (2005) 3091-3100
-
(2005)
Biochemistry
, vol.44
, pp. 3091-3100
-
-
Overman, S.A.1
Bondre, P.2
Maiti, N.C.3
Thomas Jr., G.J.4
-
35
-
-
18744429919
-
Bacteriophage P22 scaffolding protein forms oligomers in solution
-
Parker M.H., Stafford III W.F., and Prevelige Jr. P.E. Bacteriophage P22 scaffolding protein forms oligomers in solution. J. Mol. Biol. 268 (1997) 655-665
-
(1997)
J. Mol. Biol.
, vol.268
, pp. 655-665
-
-
Parker, M.H.1
Stafford III, W.F.2
Prevelige Jr., P.E.3
-
36
-
-
17444370140
-
Molecular genetics of bacteriophage P22 scaffolding protein's functional domains
-
Weigele P.R., Sampson L., Winn-Stapley D., and Casjens S.R. Molecular genetics of bacteriophage P22 scaffolding protein's functional domains. J. Mol. Biol. 348 (2005) 831-844
-
(2005)
J. Mol. Biol.
, vol.348
, pp. 831-844
-
-
Weigele, P.R.1
Sampson, L.2
Winn-Stapley, D.3
Casjens, S.R.4
-
37
-
-
0028927348
-
Genetic basis of bacteriophage HK97 prohead assembly
-
Duda R.L., Martincic K., and Hendrix R.W. Genetic basis of bacteriophage HK97 prohead assembly. J. Mol. Biol. 247 (1995) 636-647
-
(1995)
J. Mol. Biol.
, vol.247
, pp. 636-647
-
-
Duda, R.L.1
Martincic, K.2
Hendrix, R.W.3
-
38
-
-
0026546992
-
The purification and properties of the scaffolding protein of bacteriophage λ
-
Ziegelhoffer T., Yau P., Chandrasekhar G.N., Kochan J., Georgopoulos C., and Murialdo H. The purification and properties of the scaffolding protein of bacteriophage λ. J. Biol. Chem. 267 (1992) 455-461
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 455-461
-
-
Ziegelhoffer, T.1
Yau, P.2
Chandrasekhar, G.N.3
Kochan, J.4
Georgopoulos, C.5
Murialdo, H.6
-
39
-
-
0037920996
-
Thermodynamics of protein folding and stability
-
Allen G. (Ed), JAI Press, Inc.
-
Cooper A. Thermodynamics of protein folding and stability. In: Allen G. (Ed). Protein: A Comprehensive Treatise (1999), JAI Press, Inc. 217-270
-
(1999)
Protein: A Comprehensive Treatise
, pp. 217-270
-
-
Cooper, A.1
-
40
-
-
0001144723
-
Temperature dependence of the Raman spectrum of DNA: I. Raman signatures of premelting and melting transitions of poly(dA-dT)·poly(dA-dT)
-
Movileanu L., Benevides J.M., and Thomas G.J. Temperature dependence of the Raman spectrum of DNA: I. Raman signatures of premelting and melting transitions of poly(dA-dT)·poly(dA-dT). J. Raman Spectrosc. 30 (1999) 637-649
-
(1999)
J. Raman Spectrosc.
, vol.30
, pp. 637-649
-
-
Movileanu, L.1
Benevides, J.M.2
Thomas, G.J.3
-
42
-
-
0003287523
-
Raman spectroscopic study of triplex-like complexes of polyuridylic acid with the isopolar, non-isosteric phosphonate analogues of diadenosine monophosphate
-
Hanus J., Chmelova K., Stepanek J., Turpin P.-Y., Bok J., Rosenberg I., and Tocik Z. Raman spectroscopic study of triplex-like complexes of polyuridylic acid with the isopolar, non-isosteric phosphonate analogues of diadenosine monophosphate. J. Raman Spectrosc. 30 (1999) 667-676
-
(1999)
J. Raman Spectrosc.
, vol.30
, pp. 667-676
-
-
Hanus, J.1
Chmelova, K.2
Stepanek, J.3
Turpin, P.-Y.4
Bok, J.5
Rosenberg, I.6
Tocik, Z.7
-
43
-
-
2442650251
-
Structural compatibility of novel nucleotide modifications with shortened linkages designed for antigene/antisense therapy
-
Hanus J., Nemecek D., Stepanek J., and Turpin P.-Y. Structural compatibility of novel nucleotide modifications with shortened linkages designed for antigene/antisense therapy. J. Raman Spectrosc. 35 (2004) 418-425
-
(2004)
J. Raman Spectrosc.
, vol.35
, pp. 418-425
-
-
Hanus, J.1
Nemecek, D.2
Stepanek, J.3
Turpin, P.-Y.4
-
44
-
-
0034009520
-
Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and Lamm equation modeling
-
Schuck P. Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and Lamm equation modeling. Biophys. J. 78 (2000) 1606-1619
-
(2000)
Biophys. J.
, vol.78
, pp. 1606-1619
-
-
Schuck, P.1
-
45
-
-
1842481270
-
Analysis of heterogeneous interactions
-
Cole J.L. Analysis of heterogeneous interactions. Methods Enzymol. 384 (2004) 212-232
-
(2004)
Methods Enzymol.
, vol.384
, pp. 212-232
-
-
Cole, J.L.1
|