-
1
-
-
0033569743
-
A doughnut-shaped heteromer of human Sm-like proteins binds to the 3′-end of U6 snRNA, thereby facilitating U4/U6 duplex formation in vitro
-
Achsel T., Brahms H., Kastner B., Bachi A., Wilm M., and Luhrmann R. A doughnut-shaped heteromer of human Sm-like proteins binds to the 3′-end of U6 snRNA, thereby facilitating U4/U6 duplex formation in vitro. EMBO J. 18 (1999) 5789-5802
-
(1999)
EMBO J.
, vol.18
, pp. 5789-5802
-
-
Achsel, T.1
Brahms, H.2
Kastner, B.3
Bachi, A.4
Wilm, M.5
Luhrmann, R.6
-
2
-
-
3042684849
-
Novel Sm-like proteins with long C-terminal tails and associated methyltransferases
-
Albrecht M., and Lengauer T. Novel Sm-like proteins with long C-terminal tails and associated methyltransferases. FEBS Lett. 569 (2004) 18-26
-
(2004)
FEBS Lett.
, vol.569
, pp. 18-26
-
-
Albrecht, M.1
Lengauer, T.2
-
5
-
-
9144267469
-
Novel conserved domains in proteins with predicted roles in eukaryotic cell-cycle regulation, decapping, and RNA stability
-
Anantharaman V., and Aravind L. Novel conserved domains in proteins with predicted roles in eukaryotic cell-cycle regulation, decapping, and RNA stability. BMC Genomics 5 (2004) 45
-
(2004)
BMC Genomics
, vol.5
, pp. 45
-
-
Anantharaman, V.1
Aravind, L.2
-
6
-
-
0000577868
-
The 3′ to 5′ degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3′ to 5′ exonucleases of the exosome complex
-
Anderson J.S.J., and Parker R.P. The 3′ to 5′ degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3′ to 5′ exonucleases of the exosome complex. EMBO J. 17 (1998) 1497-1506
-
(1998)
EMBO J.
, vol.17
, pp. 1497-1506
-
-
Anderson, J.S.J.1
Parker, R.P.2
-
7
-
-
17844371700
-
A role for eIF4E and eIF4E-transporter in targeting mRNPs to mammalian processing bodies
-
Andrei M.A., Ingelfinger D., Heintzmann R., Achsel T., Rivera-Pomar R., and Luhrmann R. A role for eIF4E and eIF4E-transporter in targeting mRNPs to mammalian processing bodies. RNA 11 (2005) 717-727
-
(2005)
RNA
, vol.11
, pp. 717-727
-
-
Andrei, M.A.1
Ingelfinger, D.2
Heintzmann, R.3
Achsel, T.4
Rivera-Pomar, R.5
Luhrmann, R.6
-
8
-
-
0344874259
-
Evolutionary conservation of the U7 small nuclear ribonucleoprotein in Drosophila melanogaster
-
Azzouz T.N., and Schumperli D. Evolutionary conservation of the U7 small nuclear ribonucleoprotein in Drosophila melanogaster. RNA 9 (2003) 1532-1541
-
(2003)
RNA
, vol.9
, pp. 1532-1541
-
-
Azzouz, T.N.1
Schumperli, D.2
-
9
-
-
3042803133
-
Targeted mRNA degradation by deadenylation-independent decapping
-
Badis G., Saveanu C., Fromont-Racine M., and Jacquier A. Targeted mRNA degradation by deadenylation-independent decapping. Mol. Cell 15 (2004) 5-15
-
(2004)
Mol. Cell
, vol.15
, pp. 5-15
-
-
Badis, G.1
Saveanu, C.2
Fromont-Racine, M.3
Jacquier, A.4
-
10
-
-
0031030491
-
A mouse cytoplasmic exoribonuclease (mXRN1p) with preference for G4 tetraplex substrates
-
Bashkirov V.I., Scherthan H., Solinger J.A., Buerstedde J.M., and Heyer W.D. A mouse cytoplasmic exoribonuclease (mXRN1p) with preference for G4 tetraplex substrates. J. Cell Biol. 136 (1997) 761-773
-
(1997)
J. Cell Biol.
, vol.136
, pp. 761-773
-
-
Bashkirov, V.I.1
Scherthan, H.2
Solinger, J.A.3
Buerstedde, J.M.4
Heyer, W.D.5
-
11
-
-
0029758321
-
An essential component of the decapping enzyme required for normal rates of mRNA turnover
-
Beelman C.A., Stevens A., Caponigro G., LaGrandeur T.E., Hatfield L., Fortner D.M., and Parker R. An essential component of the decapping enzyme required for normal rates of mRNA turnover. Nature 382 (1996) 642-646
-
(1996)
Nature
, vol.382
, pp. 642-646
-
-
Beelman, C.A.1
Stevens, A.2
Caponigro, G.3
LaGrandeur, T.E.4
Hatfield, L.5
Fortner, D.M.6
Parker, R.7
-
12
-
-
18344396487
-
Lsm proteins and RNA processing
-
Beggs J.D. Lsm proteins and RNA processing. Biochem. Soc. Trans. 33 (2005) 433-438
-
(2005)
Biochem. Soc. Trans.
, vol.33
, pp. 433-438
-
-
Beggs, J.D.1
-
13
-
-
34548472407
-
Lsm proteins bind and stabilize RNAs containing 5′ poly(A) tracts
-
Bergman N., Moraes K.C., Anderson J.R., Zaric B., Kambach C., Schneider R.J., Wilusz C.J., and Wilusz J. Lsm proteins bind and stabilize RNAs containing 5′ poly(A) tracts. Nat. Struct. Mol. Biol. 14 (2007) 824-831
-
(2007)
Nat. Struct. Mol. Biol.
, vol.14
, pp. 824-831
-
-
Bergman, N.1
Moraes, K.C.2
Anderson, J.R.3
Zaric, B.4
Kambach, C.5
Schneider, R.J.6
Wilusz, C.J.7
Wilusz, J.8
-
14
-
-
0031841817
-
Capped mRNA degradation intermediates accumulate in the yeast spb8-2 mutant
-
Boeck R., Lapeyre B., Brown C.E., and Sachs A.B. Capped mRNA degradation intermediates accumulate in the yeast spb8-2 mutant. Mol. Cell. Biol. 18 (1998) 5062-5072
-
(1998)
Mol. Cell. Biol.
, vol.18
, pp. 5062-5072
-
-
Boeck, R.1
Lapeyre, B.2
Brown, C.E.3
Sachs, A.B.4
-
15
-
-
0033866402
-
The two proteins Pat1p (Mrt1p) and Spb8p interact in vivo, are required for mRNA decay, and are functionally linked to Pab1p
-
Bonnerot C., Boeck R., and Lapeyre B. The two proteins Pat1p (Mrt1p) and Spb8p interact in vivo, are required for mRNA decay, and are functionally linked to Pab1p. Mol. Cell. Biol. 20 (2000) 5939-5946
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 5939-5946
-
-
Bonnerot, C.1
Boeck, R.2
Lapeyre, B.3
-
16
-
-
0034664803
-
Identification of a regulated pathway for nuclear pre-mRNA turnover
-
Bousquet-Antonelli C., Presutti C., and Tollervey D. Identification of a regulated pathway for nuclear pre-mRNA turnover. Cell 102 (2000) 765-775
-
(2000)
Cell
, vol.102
, pp. 765-775
-
-
Bousquet-Antonelli, C.1
Presutti, C.2
Tollervey, D.3
-
17
-
-
0034599976
-
A Sm-like protein complex that participates in mRNA degradation
-
Bouveret E., Rigaut G., Shevchenko A., Wilm M., and Seraphin B. A Sm-like protein complex that participates in mRNA degradation. EMBO J. 19 (2000) 1661-1671
-
(2000)
EMBO J.
, vol.19
, pp. 1661-1671
-
-
Bouveret, E.1
Rigaut, G.2
Shevchenko, A.3
Wilm, M.4
Seraphin, B.5
-
18
-
-
27144515901
-
Movement of eukaryotic mRNAs between polysomes and cytoplasmic processing bodies
-
Brengues M., Teixeira D., and Parker R. Movement of eukaryotic mRNAs between polysomes and cytoplasmic processing bodies. Science 310 (2005) 486-489
-
(2005)
Science
, vol.310
, pp. 486-489
-
-
Brengues, M.1
Teixeira, D.2
Parker, R.3
-
19
-
-
0031740339
-
Poly(A) tail length control in Saccharomyces cerevisiae occurs by message-specific deadenylation
-
Brown C.E., and Sachs A.B. Poly(A) tail length control in Saccharomyces cerevisiae occurs by message-specific deadenylation. Mol. Cell. Biol. 18 (1998) 6548-6559
-
(1998)
Mol. Cell. Biol.
, vol.18
, pp. 6548-6559
-
-
Brown, C.E.1
Sachs, A.B.2
-
20
-
-
0028809873
-
Multiple functions for the poly(A)-binding protein in mRNA decapping and deadenylation in yeast
-
Caponigro G., and Parker R. Multiple functions for the poly(A)-binding protein in mRNA decapping and deadenylation in yeast. Genes Dev. 9 (1995) 2421-2432
-
(1995)
Genes Dev.
, vol.9
, pp. 2421-2432
-
-
Caponigro, G.1
Parker, R.2
-
21
-
-
0141924550
-
The Prp 19p-associated complex in spliceosome activation
-
Chan S.-P., Kao D.-I., Tsai W.-Y., and Cheng S.-C. The Prp 19p-associated complex in spliceosome activation. Science 302 (2003) 279-282
-
(2003)
Science
, vol.302
, pp. 279-282
-
-
Chan, S.-P.1
Kao, D.-I.2
Tsai, W.-Y.3
Cheng, S.-C.4
-
22
-
-
18044371822
-
AU binding proteins recruit the exosome to degrade ARE-containing mRNAs
-
Chen C.Y., Gherzi R., Ong S.E., Chan E.L., Raijmakers R., Pruijn G.J., Stoecklin G., Moroni C., Mann M., and Karin M. AU binding proteins recruit the exosome to degrade ARE-containing mRNAs. Cell 107 (2001) 451-464
-
(2001)
Cell
, vol.107
, pp. 451-464
-
-
Chen, C.Y.1
Gherzi, R.2
Ong, S.E.3
Chan, E.L.4
Raijmakers, R.5
Pruijn, G.J.6
Stoecklin, G.7
Moroni, C.8
Mann, M.9
Karin, M.10
-
23
-
-
34250804009
-
The decapping activator Lsm1p-7p-Pat1p complex has the intrinsic ability to distinguish between oligoadenylated and polyadenylated RNAs
-
Chowdhury A., Mukhopadhyay J., and Tharun S. The decapping activator Lsm1p-7p-Pat1p complex has the intrinsic ability to distinguish between oligoadenylated and polyadenylated RNAs. RNA 13 (2007) 998-1016
-
(2007)
RNA
, vol.13
, pp. 998-1016
-
-
Chowdhury, A.1
Mukhopadhyay, J.2
Tharun, S.3
-
25
-
-
7244226381
-
ATX-2, the C. elegans ortholog of ataxin 2, functions in translational regulation in the germline
-
Ciosk R., DePalma M., and Priess J.R. ATX-2, the C. elegans ortholog of ataxin 2, functions in translational regulation in the germline. Development 131 (2004) 4831-4841
-
(2004)
Development
, vol.131
, pp. 4831-4841
-
-
Ciosk, R.1
DePalma, M.2
Priess, J.R.3
-
27
-
-
25144482816
-
General translational repression by activators of mRNA decapping
-
Coller J., and Parker R. General translational repression by activators of mRNA decapping. Cell 122 (2005) 875-886
-
(2005)
Cell
, vol.122
, pp. 875-886
-
-
Coller, J.1
Parker, R.2
-
28
-
-
0032532439
-
mRNA stabilization by poly(A) binding protein is independent of poly(A) and requires translation
-
Coller J.M., Gray N.K., and Wickens M.P. mRNA stabilization by poly(A) binding protein is independent of poly(A) and requires translation. Genes Dev. 12 (1998) 3226-3235
-
(1998)
Genes Dev.
, vol.12
, pp. 3226-3235
-
-
Coller, J.M.1
Gray, N.K.2
Wickens, M.P.3
-
29
-
-
0035674477
-
The DEAD box helicase, Dhh1p, functions in mRNA decapping and interacts with both the decapping and deadenylase complexes
-
Coller J.M., Tucker M., Sheth U., Valencia-Sanchez M.A., and Parker R. The DEAD box helicase, Dhh1p, functions in mRNA decapping and interacts with both the decapping and deadenylase complexes. RNA 7 (2001) 1717-1727
-
(2001)
RNA
, vol.7
, pp. 1717-1727
-
-
Coller, J.M.1
Tucker, M.2
Sheth, U.3
Valencia-Sanchez, M.A.4
Parker, R.5
-
30
-
-
0035876146
-
Crystal structure of a heptameric Sm-like protein complex from archaea: Implications for the structure and evolution of snRNPs
-
Collins B.M., Harrop S.J., Kornfeld G.D., Dawes I.W., Curmi P.M., and Mabbutt B.C. Crystal structure of a heptameric Sm-like protein complex from archaea: Implications for the structure and evolution of snRNPs. J. Mol. Biol. 309 (2001) 915-923
-
(2001)
J. Mol. Biol.
, vol.309
, pp. 915-923
-
-
Collins, B.M.1
Harrop, S.J.2
Kornfeld, G.D.3
Dawes, I.W.4
Curmi, P.M.5
Mabbutt, B.C.6
-
31
-
-
0038268182
-
Homomeric ring assemblies of eukaryotic Sm proteins have affinity for both RNA and DNA. Crystal structure of an oligomeric complex of yeast SmF
-
Collins B.M., Cubeddu L., Naidoo N., Harrop S.J., Kornfeld G.D., Dawes I.W., Curmi P.M., and Mabbutt B.C. Homomeric ring assemblies of eukaryotic Sm proteins have affinity for both RNA and DNA. Crystal structure of an oligomeric complex of yeast SmF. J. Biol. Chem. 278 (2003) 17291-17298
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 17291-17298
-
-
Collins, B.M.1
Cubeddu, L.2
Naidoo, N.3
Harrop, S.J.4
Kornfeld, G.D.5
Dawes, I.W.6
Curmi, P.M.7
Mabbutt, B.C.8
-
32
-
-
0029054375
-
Identification and characterization of Uss1p (Sdb23p): A novel U6 snRNA-associated protein with significant similarity to core proteins of small nuclear ribonucleoproteins
-
Cooper M., Johnston L.H., and Beggs J.D. Identification and characterization of Uss1p (Sdb23p): A novel U6 snRNA-associated protein with significant similarity to core proteins of small nuclear ribonucleoproteins. EMBO J. 14 (1995) 2066-2075
-
(1995)
EMBO J.
, vol.14
, pp. 2066-2075
-
-
Cooper, M.1
Johnston, L.H.2
Beggs, J.D.3
-
33
-
-
0030940846
-
Messenger RNA deadenylylation precedes decapping in mammalian cells
-
Couttet P., Fromont-Racine M., Steel D., Pictet R., and Grange T. Messenger RNA deadenylylation precedes decapping in mammalian cells. Proc. Natl. Acad. Sci. USA 94 (1997) 5628-5633
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 5628-5633
-
-
Couttet, P.1
Fromont-Racine, M.2
Steel, D.3
Pictet, R.4
Grange, T.5
-
34
-
-
0038054468
-
RNAse III-mediated degradation of unspliced pre-mRNAs and lariat introns
-
Danin-Kreiselman M., Lee C.Y., and Chanfreau G. RNAse III-mediated degradation of unspliced pre-mRNAs and lariat introns. Mol. Cell 11 (2003) 1279-1289
-
(2003)
Mol. Cell
, vol.11
, pp. 1279-1289
-
-
Danin-Kreiselman, M.1
Lee, C.Y.2
Chanfreau, G.3
-
35
-
-
0042632964
-
Degradation of normal mRNA in the nucleus of Saccharomyces cerevisiae
-
Das B., Butler J.S., and Sherman F. Degradation of normal mRNA in the nucleus of Saccharomyces cerevisiae. Mol. Cell. Biol. 23 (2003) 5502-5515
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 5502-5515
-
-
Das, B.1
Butler, J.S.2
Sherman, F.3
-
36
-
-
0027320701
-
A turnover pathway for both stable and unstable mRNAs in yeast: Evidence for a requirement for deadenylation
-
Decker C.J., and Parker R. A turnover pathway for both stable and unstable mRNAs in yeast: Evidence for a requirement for deadenylation. Genes Dev. 7 (1993) 1632-1643
-
(1993)
Genes Dev.
, vol.7
, pp. 1632-1643
-
-
Decker, C.J.1
Parker, R.2
-
37
-
-
35948951960
-
Edc3p and a glutamine/asparagine-rich domain of Lsm4p function in processing body assembly in Saccharomyces cerevisiae
-
Decker C.J., Teixeira D., and Parker R. Edc3p and a glutamine/asparagine-rich domain of Lsm4p function in processing body assembly in Saccharomyces cerevisiae. J. Cell Biol. 179 (2007) 437-449
-
(2007)
J. Cell Biol.
, vol.179
, pp. 437-449
-
-
Decker, C.J.1
Teixeira, D.2
Parker, R.3
-
38
-
-
0035958585
-
Prions affect the appearance of other prions: The story of [PIN(+)]
-
Derkatch I.L., Bradley M.E., Hong J.Y., and Liebman S.W. Prions affect the appearance of other prions: The story of [PIN(+)]. Cell 106 (2001) 171-182
-
(2001)
Cell
, vol.106
, pp. 171-182
-
-
Derkatch, I.L.1
Bradley, M.E.2
Hong, J.Y.3
Liebman, S.W.4
-
39
-
-
0032826096
-
Formation of the 3′ end of histone mRNA
-
Dominski Z., and Marzluff W.F. Formation of the 3′ end of histone mRNA. Gene 239 (1999) 1-14
-
(1999)
Gene
, vol.239
, pp. 1-14
-
-
Dominski, Z.1
Marzluff, W.F.2
-
40
-
-
0036142684
-
A novel zinc finger protein is associated with U7 snRNP and interacts with the stem-loop binding protein in the histone pre-mRNP to stimulate 3′-end processing
-
Dominski Z., Erkmann J.A., Yang X., Sanchez R., and Marzluff W.F. A novel zinc finger protein is associated with U7 snRNP and interacts with the stem-loop binding protein in the histone pre-mRNP to stimulate 3′-end processing. Genes Dev. 16 (2002) 58-71
-
(2002)
Genes Dev.
, vol.16
, pp. 58-71
-
-
Dominski, Z.1
Erkmann, J.A.2
Yang, X.3
Sanchez, R.4
Marzluff, W.F.5
-
42
-
-
33847059515
-
YRA1 autoregulation requires nuclear export and cytoplasmic Edc3p-mediated degradation of its pre-mRNA
-
Dong S., Li C., Zenklusen D., Singer R.H., Jacobson A., and He F. YRA1 autoregulation requires nuclear export and cytoplasmic Edc3p-mediated degradation of its pre-mRNA. Mol. Cell 25 (2007) 559-573
-
(2007)
Mol. Cell
, vol.25
, pp. 559-573
-
-
Dong, S.1
Li, C.2
Zenklusen, D.3
Singer, R.H.4
Jacobson, A.5
He, F.6
-
43
-
-
0033214061
-
The DCP2 protein is required for mRNA decapping in Saccharomyces cerevisiae and contains a functional MutT motif
-
Dunckley T., and Parker R. The DCP2 protein is required for mRNA decapping in Saccharomyces cerevisiae and contains a functional MutT motif. EMBO J. 18 (1999) 5411-5422
-
(1999)
EMBO J.
, vol.18
, pp. 5411-5422
-
-
Dunckley, T.1
Parker, R.2
-
44
-
-
0035148534
-
Two related proteins, Edc1p and Edc2p, stimulate mRNA decapping in Saccharomyces cerevisiae
-
Dunckley T., Tucker M., and Parker R. Two related proteins, Edc1p and Edc2p, stimulate mRNA decapping in Saccharomyces cerevisiae. Genetics 157 (2001) 27-37
-
(2001)
Genetics
, vol.157
, pp. 27-37
-
-
Dunckley, T.1
Tucker, M.2
Parker, R.3
-
45
-
-
0038107498
-
Rpb4p, a subunit of RNA polymerase II, mediates mRNA export during stress
-
Farago M., Nahari T., Hammel C., Cole C.N., and Choder M. Rpb4p, a subunit of RNA polymerase II, mediates mRNA export during stress. Mol. Biol. Cell 14 (2003) 2744-2755
-
(2003)
Mol. Biol. Cell
, vol.14
, pp. 2744-2755
-
-
Farago, M.1
Nahari, T.2
Hammel, C.3
Cole, C.N.4
Choder, M.5
-
46
-
-
29144481702
-
Multiple processing body factors and the ARE binding protein TTP activate mRNA decapping
-
Fenger-Gron M., Fillman C., Norrild B., and Lykke-Andersen J. Multiple processing body factors and the ARE binding protein TTP activate mRNA decapping. Mol. Cell 20 (2005) 905-915
-
(2005)
Mol. Cell
, vol.20
, pp. 905-915
-
-
Fenger-Gron, M.1
Fillman, C.2
Norrild, B.3
Lykke-Andersen, J.4
-
47
-
-
2542459281
-
An Lsm2-Lsm7 complex in Saccharomyces cerevisiae associates with the small nucleolar RNA snR5
-
Fernandez C.F., Pannone B.K., Chen X., Fuchs G., and Wolin S.L. An Lsm2-Lsm7 complex in Saccharomyces cerevisiae associates with the small nucleolar RNA snR5. Mol. Biol. Cell 15 (2004) 2842-2852
-
(2004)
Mol. Biol. Cell
, vol.15
, pp. 2842-2852
-
-
Fernandez, C.F.1
Pannone, B.K.2
Chen, X.3
Fuchs, G.4
Wolin, S.L.5
-
48
-
-
19344362627
-
RNA decapping inside and outside of processing bodies
-
Fillman C., and Lykke-Andersen J. RNA decapping inside and outside of processing bodies. Curr. Opin. Cell Biol. 17 (2005) 326-331
-
(2005)
Curr. Opin. Cell Biol.
, vol.17
, pp. 326-331
-
-
Fillman, C.1
Lykke-Andersen, J.2
-
49
-
-
0037013898
-
The DEAD box protein Dhh1 stimulates the decapping enzyme Dcp1
-
Fischer N., and Weis K. The DEAD box protein Dhh1 stimulates the decapping enzyme Dcp1. EMBO J. 21 (2002) 2788-2797
-
(2002)
EMBO J.
, vol.21
, pp. 2788-2797
-
-
Fischer, N.1
Weis, K.2
-
50
-
-
22244451374
-
CaSm-mediated cellular transformation is associated with altered gene expression and messenger RNA stability
-
Fraser M.M., Watson P.M., Fraig M.M., Kelley J.R., Nelson P.S., Boylan A.M., Cole D.J., and Watson D.K. CaSm-mediated cellular transformation is associated with altered gene expression and messenger RNA stability. Cancer Res. 65 (2005) 6228-6236
-
(2005)
Cancer Res.
, vol.65
, pp. 6228-6236
-
-
Fraser, M.M.1
Watson, P.M.2
Fraig, M.M.3
Kelley, J.R.4
Nelson, P.S.5
Boylan, A.M.6
Cole, D.J.7
Watson, D.K.8
-
51
-
-
0037223402
-
p38 mitogen-activated protein kinase-dependent and -independent signaling of mRNA stability of AU-rich element-containing transcripts
-
Frevel M.A., Bakheet T., Silva A.M., Hissong J.G., Khabar K.S., and Williams B.R. p38 mitogen-activated protein kinase-dependent and -independent signaling of mRNA stability of AU-rich element-containing transcripts. Mol. Cell. Biol. 23 (2003) 425-436
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 425-436
-
-
Frevel, M.A.1
Bakheet, T.2
Silva, A.M.3
Hissong, J.G.4
Khabar, K.S.5
Williams, B.R.6
-
52
-
-
0035282971
-
A novel mRNA-decapping activity in HeLa cytoplasmic extracts is regulated by AU-rich elements
-
Gao M., Wilusz C.J., Peltz S.W., and Wilusz J. A novel mRNA-decapping activity in HeLa cytoplasmic extracts is regulated by AU-rich elements. EMBO J. 20 (2001) 1134-1143
-
(2001)
EMBO J.
, vol.20
, pp. 1134-1143
-
-
Gao, M.1
Wilusz, C.J.2
Peltz, S.W.3
Wilusz, J.4
-
53
-
-
1842578583
-
Xenopus U8 snoRNA binding protein is a conserved nuclear decapping enzyme
-
Ghosh T., Peterson B., Tomasevic N., and Peculis B.A. Xenopus U8 snoRNA binding protein is a conserved nuclear decapping enzyme. Mol. Cell 13 (2004) 817-828
-
(2004)
Mol. Cell
, vol.13
, pp. 817-828
-
-
Ghosh, T.1
Peterson, B.2
Tomasevic, N.3
Peculis, B.A.4
-
56
-
-
0033598805
-
In silico detection of control signals: mRNA 3′-end-processing sequences in diverse species
-
Graber J.H., Cantor C.R., Mohr S.C., and Smith T.F. In silico detection of control signals: mRNA 3′-end-processing sequences in diverse species. Proc. Natl. Acad. Sci. USA 96 (1999) 14055-14060
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 14055-14060
-
-
Graber, J.H.1
Cantor, C.R.2
Mohr, S.C.3
Smith, T.F.4
-
57
-
-
0027478073
-
The low abundance of U7 snRNA is partly determined by its Sm binding site
-
Grimm C., Stefanovic B., and Schumperli D. The low abundance of U7 snRNA is partly determined by its Sm binding site. EMBO J. 12 (1993) 1229-1238
-
(1993)
EMBO J.
, vol.12
, pp. 1229-1238
-
-
Grimm, C.1
Stefanovic, B.2
Schumperli, D.3
-
58
-
-
0035819859
-
Regulation of mRNA stability in mammalian cells
-
Guhaniyogi J., and Brewer G. Regulation of mRNA stability in mammalian cells. Gene 265 (2001) 11-23
-
(2001)
Gene
, vol.265
, pp. 11-23
-
-
Guhaniyogi, J.1
Brewer, G.2
-
59
-
-
0036635441
-
Overexpression of the Sm-like proto-oncogene in primary and metastatic pancreatic endocrine tumors
-
Gumbs A.A., Bassi C., Moore P.S., Falconi M., Frigerio I., Baron A., Piemonti L., Modlin I., and Scarpa A. Overexpression of the Sm-like proto-oncogene in primary and metastatic pancreatic endocrine tumors. Jop 3 (2002) 109-115
-
(2002)
Jop
, vol.3
, pp. 109-115
-
-
Gumbs, A.A.1
Bassi, C.2
Moore, P.S.3
Falconi, M.4
Frigerio, I.5
Baron, A.6
Piemonti, L.7
Modlin, I.8
Scarpa, A.9
-
60
-
-
33746005932
-
Selective elimination of messenger RNA prevents an incidence of untimely meiosis
-
Harigaya Y., Tanaka H., Yamanaka S., Tanaka K., Watanabe Y., Tsutsumi C., Chikashige Y., Hiraoka Y., Yamashita A., and Yamamoto M. Selective elimination of messenger RNA prevents an incidence of untimely meiosis. Nature 442 (2006) 45-50
-
(2006)
Nature
, vol.442
, pp. 45-50
-
-
Harigaya, Y.1
Tanaka, H.2
Yamanaka, S.3
Tanaka, K.4
Watanabe, Y.5
Tsutsumi, C.6
Chikashige, Y.7
Hiraoka, Y.8
Yamashita, A.9
Yamamoto, M.10
-
61
-
-
0029791555
-
Mutations in trans-acting factors affecting mRNA decapping in Saccharomyces cerevisiae
-
Hatfield L., Beelman C.A., Stevens A., and Parker R. Mutations in trans-acting factors affecting mRNA decapping in Saccharomyces cerevisiae. Mol. Cell. Biol. 16 (1996) 5830-5838
-
(1996)
Mol. Cell. Biol.
, vol.16
, pp. 5830-5838
-
-
Hatfield, L.1
Beelman, C.A.2
Stevens, A.3
Parker, R.4
-
62
-
-
0034741815
-
The yeast cytoplasmic LsmI/Pat1p complex protects mRNA 3′ termini from partial degradation
-
He W., and Parker R. The yeast cytoplasmic LsmI/Pat1p complex protects mRNA 3′ termini from partial degradation. Genetics 158 (2001) 1445-1455
-
(2001)
Genetics
, vol.158
, pp. 1445-1455
-
-
He, W.1
Parker, R.2
-
63
-
-
0025938440
-
Determinants and regulation of cytoplasmic mRNA stability in eukaryotic cells
-
Hentze M.W. Determinants and regulation of cytoplasmic mRNA stability in eukaryotic cells. Biochim. Biophys. Acta 1090 (1991) 281-292
-
(1991)
Biochim. Biophys. Acta
, vol.1090
, pp. 281-292
-
-
Hentze, M.W.1
-
64
-
-
0029054377
-
snRNP Sm proteins share two evolutionarily conserved sequence motifs which are involved in Sm protein-protein interactions
-
Hermann H., Fabrizio P., Raker V.A., Foulaki K., Hornig H., Brahms H., and Luhrmann R. snRNP Sm proteins share two evolutionarily conserved sequence motifs which are involved in Sm protein-protein interactions. EMBO J. 14 (1995) 2076-2088
-
(1995)
EMBO J.
, vol.14
, pp. 2076-2088
-
-
Hermann, H.1
Fabrizio, P.2
Raker, V.A.3
Foulaki, K.4
Hornig, H.5
Brahms, H.6
Luhrmann, R.7
-
65
-
-
0036808553
-
mRNA stability and the control of gene expression: Implications for human disease
-
Hollams E.M., Giles K.M., Thomson A.M., and Leedman P.J. mRNA stability and the control of gene expression: Implications for human disease. Neurochem. Res. 27 (2002) 957-980
-
(2002)
Neurochem. Res.
, vol.27
, pp. 957-980
-
-
Hollams, E.M.1
Giles, K.M.2
Thomson, A.M.3
Leedman, P.J.4
-
66
-
-
33745893809
-
Decay of endoplasmic reticulum-localized mRNAs during the unfolded protein response
-
Hollien J., and Weissman J.S. Decay of endoplasmic reticulum-localized mRNAs during the unfolded protein response. Science 313 (2006) 104-107
-
(2006)
Science
, vol.313
, pp. 104-107
-
-
Hollien, J.1
Weissman, J.S.2
-
67
-
-
0027214097
-
Yeast cells lacking 5′->3′ exoribonuclease 1 contain mRNA species that are poly(A) deficient and partially lack the 5′ cap structure
-
Hsu C.L., and Stevens A. Yeast cells lacking 5′->3′ exoribonuclease 1 contain mRNA species that are poly(A) deficient and partially lack the 5′ cap structure. Mol. Cell. Biol. 13 (1993) 4826-4835
-
(1993)
Mol. Cell. Biol.
, vol.13
, pp. 4826-4835
-
-
Hsu, C.L.1
Stevens, A.2
-
68
-
-
25844497003
-
Bioinformatic identification of candidate cis-regulatory elements involved in human mRNA polyadenylation
-
Hu J., Lutz C.S., Wilusz J., and Tian B. Bioinformatic identification of candidate cis-regulatory elements involved in human mRNA polyadenylation. RNA 11 (2005) 1485-1493
-
(2005)
RNA
, vol.11
, pp. 1485-1493
-
-
Hu, J.1
Lutz, C.S.2
Wilusz, J.3
Tian, B.4
-
69
-
-
0033044001
-
Expression of ataxin-2 in brains from normal individuals and patients with Alzheimer's disease and spinocerebellar ataxia 2
-
Huynh D.P., Del Bigio M.R., Ho D.H., and Pulst S.M. Expression of ataxin-2 in brains from normal individuals and patients with Alzheimer's disease and spinocerebellar ataxia 2. Ann. Neurol. 45 (1999) 232-241
-
(1999)
Ann. Neurol.
, vol.45
, pp. 232-241
-
-
Huynh, D.P.1
Del Bigio, M.R.2
Ho, D.H.3
Pulst, S.M.4
-
70
-
-
33845957402
-
Untemplated oligoadenylation promotes degradation of RISC-cleaved transcripts
-
Ibrahim F., Rohr J., Jeong W.J., Hesson J., and Cerutti H. Untemplated oligoadenylation promotes degradation of RISC-cleaved transcripts. Science 314 (2006) 1893
-
(2006)
Science
, vol.314
, pp. 1893
-
-
Ibrahim, F.1
Rohr, J.2
Jeong, W.J.3
Hesson, J.4
Cerutti, H.5
-
71
-
-
0036909093
-
The human LSm1-7 proteins colocalize with the mRNA-degrading enzymes Dcp1/2 and Xrnl in distinct cytoplasmic foci
-
Ingelfinger D., Arndt-Jovin D.J., Luhrmann R., and Achsel T. The human LSm1-7 proteins colocalize with the mRNA-degrading enzymes Dcp1/2 and Xrnl in distinct cytoplasmic foci. RNA 8 (2002) 1489-1501
-
(2002)
RNA
, vol.8
, pp. 1489-1501
-
-
Ingelfinger, D.1
Arndt-Jovin, D.J.2
Luhrmann, R.3
Achsel, T.4
-
72
-
-
0030764692
-
Rat1p and Xrn1p are functionally interchangeable exoribonucleases that are restricted to and required in the nucleus and cytoplasm, respectively
-
Johnson A.W. Rat1p and Xrn1p are functionally interchangeable exoribonucleases that are restricted to and required in the nucleus and cytoplasm, respectively. Mol. Cell. Biol. 17 (1997) 6122-6130
-
(1997)
Mol. Cell. Biol.
, vol.17
, pp. 6122-6130
-
-
Johnson, A.W.1
-
73
-
-
0033524941
-
Crystal structures of two Sm protein complexes and their implications for the assembly of the spliceosomal snRNPs
-
Kambach C., Walke S., Young R., Avis J.M., de la Fortelle E., Raker V.A., Luhrmann R., Li J., and Nagai K. Crystal structures of two Sm protein complexes and their implications for the assembly of the spliceosomal snRNPs. Cell 96 (1999) 375-387
-
(1999)
Cell
, vol.96
, pp. 375-387
-
-
Kambach, C.1
Walke, S.2
Young, R.3
Avis, J.M.4
de la Fortelle, E.5
Raker, V.A.6
Luhrmann, R.7
Li, J.8
Nagai, K.9
-
74
-
-
22344455246
-
Stress granules and processing bodies are dynamically linked sites of mRNP remodeling
-
Kedersha N., Stoecklin G., Ayodele M., Yacono P., Lykke-Andersen J., Fitzler M.J., Scheuner D., Kaufman R.J., Golan D.E., and Anderson P. Stress granules and processing bodies are dynamically linked sites of mRNP remodeling. J. Cell Biol. 169 (2005) 871-884
-
(2005)
J. Cell Biol.
, vol.169
, pp. 871-884
-
-
Kedersha, N.1
Stoecklin, G.2
Ayodele, M.3
Yacono, P.4
Lykke-Andersen, J.5
Fitzler, M.J.6
Scheuner, D.7
Kaufman, R.J.8
Golan, D.E.9
Anderson, P.10
-
75
-
-
0033860810
-
The cancer-associated Sm-like oncogene: A novel target for the gene therapy of pancreatic cancer
-
Kelley J.R., Brown J.M., Frasier M.M., Baron P.L., Schweinfest C.W., Vournakis J.N., Watson D.K., and Cole D.J. The cancer-associated Sm-like oncogene: A novel target for the gene therapy of pancreatic cancer. Surgery 128 (2000) 353-360
-
(2000)
Surgery
, vol.128
, pp. 353-360
-
-
Kelley, J.R.1
Brown, J.M.2
Frasier, M.M.3
Baron, P.L.4
Schweinfest, C.W.5
Vournakis, J.N.6
Watson, D.K.7
Cole, D.J.8
-
76
-
-
0034902935
-
CaSm/gemcitabine chemo-gene therapy leads to prolonged survival in a murine model of pancreatic cancer
-
Kelley J.R., Fraser M.M., Schweinfest C.W., Vournakis J.N., Watson D.K., and Cole D.J. CaSm/gemcitabine chemo-gene therapy leads to prolonged survival in a murine model of pancreatic cancer. Surgery 130 (2001) 280-288
-
(2001)
Surgery
, vol.130
, pp. 280-288
-
-
Kelley, J.R.1
Fraser, M.M.2
Schweinfest, C.W.3
Vournakis, J.N.4
Watson, D.K.5
Cole, D.J.6
-
77
-
-
0041304769
-
CaSm antisense gene therapy: A novel approach for the treatment of pancreatic cancer
-
Kelley J.R., Fraser M.M., Hubbard J.M., Watson D.K., and Cole D.J. CaSm antisense gene therapy: A novel approach for the treatment of pancreatic cancer. Anticancer Res. 23 (2003) 2007-2013
-
(2003)
Anticancer Res.
, vol.23
, pp. 2007-2013
-
-
Kelley, J.R.1
Fraser, M.M.2
Hubbard, J.M.3
Watson, D.K.4
Cole, D.J.5
-
78
-
-
3142515957
-
Poly(A)-binding-protein-mediated regulation of hDcp2 decapping in vitro
-
Khanna R., and Kiledjian M. Poly(A)-binding-protein-mediated regulation of hDcp2 decapping in vitro. EMBO J. 23 (2004) 1968-1976
-
(2004)
EMBO J.
, vol.23
, pp. 1968-1976
-
-
Khanna, R.1
Kiledjian, M.2
-
79
-
-
0032840052
-
Neuronal intranuclear inclusions in spinocerebellar ataxia type 2: Triple-labeling immunofluorescent study
-
Koyano S., Uchihara T., Fujigasaki H., Nakamura A., Yagishita S., and Iwabuchi K. Neuronal intranuclear inclusions in spinocerebellar ataxia type 2: Triple-labeling immunofluorescent study. Neurosci. Lett. 273 (1999) 117-120
-
(1999)
Neurosci. Lett.
, vol.273
, pp. 117-120
-
-
Koyano, S.1
Uchihara, T.2
Fujigasaki, H.3
Nakamura, A.4
Yagishita, S.5
Iwabuchi, K.6
-
80
-
-
33645453254
-
Global landscape of protein complexes in the yeast Saccharomyces cerevisiae
-
Krogan N.J., Cagney G., Yu H., Zhong G., Guo X., Ignatchenko A., Li J., Pu S., Datta N., Tikuisis A.P., Punna T., Peregrin-Alvarez J.M., et al. Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature 440 (2006) 637-643
-
(2006)
Nature
, vol.440
, pp. 637-643
-
-
Krogan, N.J.1
Cagney, G.2
Yu, H.3
Zhong, G.4
Guo, X.5
Ignatchenko, A.6
Li, J.7
Pu, S.8
Datta, N.9
Tikuisis, A.P.10
Punna, T.11
Peregrin-Alvarez, J.M.12
-
81
-
-
1642343366
-
Identification of Edc3p as an enhancer of mRNA decapping in Saccharomyces cerevisiae
-
Kshirsagar M., and Parker R. Identification of Edc3p as an enhancer of mRNA decapping in Saccharomyces cerevisiae. Genetics 166 (2004) 729-739
-
(2004)
Genetics
, vol.166
, pp. 729-739
-
-
Kshirsagar, M.1
Parker, R.2
-
82
-
-
6344282195
-
Nuclear pre-mRNA decapping and 5′ degradation in yeast require the Lsm2-8p complex
-
Kufel J., Bousquet-Antonelli C., Beggs J.D., and Tollervey D. Nuclear pre-mRNA decapping and 5′ degradation in yeast require the Lsm2-8p complex. Mol. Cell. Biol. 24 (2004) 9646-9657
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 9646-9657
-
-
Kufel, J.1
Bousquet-Antonelli, C.2
Beggs, J.D.3
Tollervey, D.4
-
83
-
-
0036124889
-
Developmental control of histone mRNA and dSLBP synthesis during Drosophila embryogenesis and the role of dSLBP in histone mRNA 3′ end processing in vivo
-
Lanzotti D.J., Kaygun H., Yang X., Duronio R.J., and Marzluff W.F. Developmental control of histone mRNA and dSLBP synthesis during Drosophila embryogenesis and the role of dSLBP in histone mRNA 3′ end processing in vivo. Mol. Cell. Biol. 22 (2002) 2267-2282
-
(2002)
Mol. Cell. Biol.
, vol.22
, pp. 2267-2282
-
-
Lanzotti, D.J.1
Kaygun, H.2
Yang, X.3
Duronio, R.J.4
Marzluff, W.F.5
-
85
-
-
0000341684
-
Antibodies to small nuclear RNAs complexed with proteins are produced by patients with systemic lupus erythematosus
-
Lerner M.R., and Steitz J.A. Antibodies to small nuclear RNAs complexed with proteins are produced by patients with systemic lupus erythematosus. Proc. Natl. Acad. Sci. USA 76 (1979) 5495-5499
-
(1979)
Proc. Natl. Acad. Sci. USA
, vol.76
, pp. 5495-5499
-
-
Lerner, M.R.1
Steitz, J.A.2
-
86
-
-
0019829528
-
Snurps and scyrps
-
Lerner M.R., and Steitz J.A. Snurps and scyrps. Cell 25 (1981) 298-300
-
(1981)
Cell
, vol.25
, pp. 298-300
-
-
Lerner, M.R.1
Steitz, J.A.2
-
87
-
-
23944493378
-
Methylation protects miRNAs and siRNAs from a 3′-end uridylation activity in Arabidopsis
-
Li J., Yang Z., Yu B., Liu J., and Chen X. Methylation protects miRNAs and siRNAs from a 3′-end uridylation activity in Arabidopsis. Curr. Biol. 15 (2005) 1501-1507
-
(2005)
Curr. Biol.
, vol.15
, pp. 1501-1507
-
-
Li, J.1
Yang, Z.2
Yu, B.3
Liu, J.4
Chen, X.5
-
88
-
-
0037009517
-
The scavenger mRNA decapping enzyme DcpS is a member of the HIT family of pyrophosphatases
-
Liu H., Rodgers N.D., Jiao X., and Kiledjian M. The scavenger mRNA decapping enzyme DcpS is a member of the HIT family of pyrophosphatases. EMBO J. 21 (2002) 4699-4708
-
(2002)
EMBO J.
, vol.21
, pp. 4699-4708
-
-
Liu, H.1
Rodgers, N.D.2
Jiao, X.3
Kiledjian, M.4
-
89
-
-
29144508551
-
The RNA polymerase II subunit Rpb4p mediates decay of a specific class of mRNAs
-
Lotan R., Bar-On V.G., Harel-Sharvit L., Duek L., Melamed D., and Choder M. The RNA polymerase II subunit Rpb4p mediates decay of a specific class of mRNAs. Genes Dev. 19 (2005) 3004-3016
-
(2005)
Genes Dev.
, vol.19
, pp. 3004-3016
-
-
Lotan, R.1
Bar-On, V.G.2
Harel-Sharvit, L.3
Duek, L.4
Melamed, D.5
Choder, M.6
-
90
-
-
34748850800
-
The Rpb7p subunit of yeast RNA polymerase II plays roles in the two major cytoplasmic mRNA decay mechanisms
-
Lotan R., Goler-Baron V., Duek L., Haimovich G., and Choder M. The Rpb7p subunit of yeast RNA polymerase II plays roles in the two major cytoplasmic mRNA decay mechanisms. J. Cell Biol. 178 (2007) 1133-1143
-
(2007)
J. Cell Biol.
, vol.178
, pp. 1133-1143
-
-
Lotan, R.1
Goler-Baron, V.2
Duek, L.3
Haimovich, G.4
Choder, M.5
-
91
-
-
0025173604
-
Structure of spliceosomal snRNPs and their role in pre-mRNA splicing
-
Luhrmann R., Kastner B., and Bach M. Structure of spliceosomal snRNPs and their role in pre-mRNA splicing. Biochim. Biophys. Acta 1087 (1990) 265-292
-
(1990)
Biochim. Biophys. Acta
, vol.1087
, pp. 265-292
-
-
Luhrmann, R.1
Kastner, B.2
Bach, M.3
-
92
-
-
0036888905
-
Identification of a human decapping complex associated with hUpf proteins in nonsense-mediated decay
-
Lykke-Andersen J. Identification of a human decapping complex associated with hUpf proteins in nonsense-mediated decay. Mol. Cell. Biol. 22 (2002) 8114-8121
-
(2002)
Mol. Cell. Biol.
, vol.22
, pp. 8114-8121
-
-
Lykke-Andersen, J.1
-
93
-
-
0031724595
-
Pbp1p, a factor interacting with Saccharomyces cerevisiae poly(A)-binding protein, regulates polyadenylation
-
Mangus D.A., Amrani N., and Jacobson A. Pbp1p, a factor interacting with Saccharomyces cerevisiae poly(A)-binding protein, regulates polyadenylation. Mol. Cell. Biol. 18 (1998) 7383-7396
-
(1998)
Mol. Cell. Biol.
, vol.18
, pp. 7383-7396
-
-
Mangus, D.A.1
Amrani, N.2
Jacobson, A.3
-
94
-
-
2942532990
-
Positive and negative regulation of poly(A) nuclease
-
Mangus D.A., Evans M.C., Agrin N.S., Smith M., Gongidi P., and Jacobson A. Positive and negative regulation of poly(A) nuclease. Mol. Cell. Biol. 24 (2004) 5521-5533
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 5521-5533
-
-
Mangus, D.A.1
Evans, M.C.2
Agrin, N.S.3
Smith, M.4
Gongidi, P.5
Jacobson, A.6
-
95
-
-
2942536740
-
Identification of factors regulating poly(A) tail synthesis and maturation
-
Mangus D.A., Smith M.M., McSweeney J.M., and Jacobson A. Identification of factors regulating poly(A) tail synthesis and maturation. Mol. Cell. Biol. 24 (2004) 4196-4206
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 4196-4206
-
-
Mangus, D.A.1
Smith, M.M.2
McSweeney, J.M.3
Jacobson, A.4
-
96
-
-
0031039529
-
The gene for histone RNA hairpin binding protein is located on human chromosome 4 and encodes a novel type of RNA binding protein
-
Martin F., Schaller A., Eglite S., Schumperli D., and Muller B. The gene for histone RNA hairpin binding protein is located on human chromosome 4 and encodes a novel type of RNA binding protein. EMBO J. 16 (1997) 769-778
-
(1997)
EMBO J.
, vol.16
, pp. 769-778
-
-
Martin, F.1
Schaller, A.2
Eglite, S.3
Schumperli, D.4
Muller, B.5
-
97
-
-
19344366158
-
Metazoan replication-dependent histone mRNAs: A distinct set of RNA polymerase II transcripts
-
Marzluff W.F. Metazoan replication-dependent histone mRNAs: A distinct set of RNA polymerase II transcripts. Curr. Opin. Cell Biol. 17 (2005) 274-280
-
(2005)
Curr. Opin. Cell Biol.
, vol.17
, pp. 274-280
-
-
Marzluff, W.F.1
-
98
-
-
0033517098
-
Characterization of Sm-like proteins in yeast and their association with U6 snRNA
-
Mayes A.E., Verdone L., Legrain P., and Beggs J.D. Characterization of Sm-like proteins in yeast and their association with U6 snRNA. EMBO J. 18 (1999) 4321-4331
-
(1999)
EMBO J.
, vol.18
, pp. 4321-4331
-
-
Mayes, A.E.1
Verdone, L.2
Legrain, P.3
Beggs, J.D.4
-
99
-
-
7444272009
-
Messenger RNA turnover in eukaryotes: Pathways and enzymes
-
Meyer S., Temme C., and Wahle E. Messenger RNA turnover in eukaryotes: Pathways and enzymes. Crit. Rev. Biochem. Mol. Biol. 39 (2004) 197-216
-
(2004)
Crit. Rev. Biochem. Mol. Biol.
, vol.39
, pp. 197-216
-
-
Meyer, S.1
Temme, C.2
Wahle, E.3
-
100
-
-
0034710897
-
A census of glutamine/asparagine-rich regions: Implications for their conserved function and the prediction of novel prions
-
Michelitsch M.D., and Weissman J.S. A census of glutamine/asparagine-rich regions: Implications for their conserved function and the prediction of novel prions. Proc. Natl. Acad. Sci. USA 97 (2000) 11910-11915
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 11910-11915
-
-
Michelitsch, M.D.1
Weissman, J.S.2
-
101
-
-
0026441426
-
Mutations affecting stability and deadenylation of the yeast MFA2 transcript
-
Muhlrad D., and Parker R. Mutations affecting stability and deadenylation of the yeast MFA2 transcript. Genes Dev. 6 (1992) 2100-2111
-
(1992)
Genes Dev.
, vol.6
, pp. 2100-2111
-
-
Muhlrad, D.1
Parker, R.2
-
102
-
-
0028202495
-
Deadenylation of the unstable mRNA encoded by the yeast MFA2 gene leads to decapping followed by 5′->3′ digestion of the transcript
-
Muhlrad D., Decker C.J., and Parker R. Deadenylation of the unstable mRNA encoded by the yeast MFA2 gene leads to decapping followed by 5′->3′ digestion of the transcript. Genes Dev. 8 (1994) 855-866
-
(1994)
Genes Dev.
, vol.8
, pp. 855-866
-
-
Muhlrad, D.1
Decker, C.J.2
Parker, R.3
-
103
-
-
0028961870
-
Turnover mechanisms of the stable yeast PGK1 mRNA
-
Muhlrad D., Decker C.J., and Parker R. Turnover mechanisms of the stable yeast PGK1 mRNA. Mol. Cell. Biol. 15 (1995) 2145-2156
-
(1995)
Mol. Cell. Biol.
, vol.15
, pp. 2145-2156
-
-
Muhlrad, D.1
Decker, C.J.2
Parker, R.3
-
104
-
-
0037080834
-
The mammalian exosome mediates the efficient degradation of mRNAs that contain AU-rich elements
-
Mukherjee D., Gao M., O'Connor J.P., Raijmakers R., Pruijn G., Lutz C.S., and Wilusz J. The mammalian exosome mediates the efficient degradation of mRNAs that contain AU-rich elements. EMBO J. 21 (2002) 165-174
-
(2002)
EMBO J.
, vol.21
, pp. 165-174
-
-
Mukherjee, D.1
Gao, M.2
O'Connor, J.P.3
Raijmakers, R.4
Pruijn, G.5
Lutz, C.S.6
Wilusz, J.7
-
105
-
-
38149023239
-
Degradation of histone mRNA requires oligouridylation followed by decapping and simultaneous degradation of the mRNA both 5′ to 3′ and 3′ to 5′
-
Mullen T.E., and Marzluff W.F. Degradation of histone mRNA requires oligouridylation followed by decapping and simultaneous degradation of the mRNA both 5′ to 3′ and 3′ to 5′. Genes Dev. 22 (2008) 50-65
-
(2008)
Genes Dev.
, vol.22
, pp. 50-65
-
-
Mullen, T.E.1
Marzluff, W.F.2
-
106
-
-
0035826794
-
The crystal structure of a heptameric archaeal Sm protein: Implications for the eukaryotic snRNP core
-
Mura C., Cascio D., Sawaya M.R., and Eisenberg D.S. The crystal structure of a heptameric archaeal Sm protein: Implications for the eukaryotic snRNP core. Proc. Natl. Acad. Sci. USA 98 (2001) 5532-5537
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 5532-5537
-
-
Mura, C.1
Cascio, D.2
Sawaya, M.R.3
Eisenberg, D.S.4
-
107
-
-
0037378351
-
The oligomerization and ligand-binding properties of Sm-like archaeal proteins (SmAPs)
-
Mura C., Kozhukhovsky A., Gingery M., Phillips M., and Eisenberg D. The oligomerization and ligand-binding properties of Sm-like archaeal proteins (SmAPs). Protein Sci. 12 (2003) 832-847
-
(2003)
Protein Sci.
, vol.12
, pp. 832-847
-
-
Mura, C.1
Kozhukhovsky, A.2
Gingery, M.3
Phillips, M.4
Eisenberg, D.5
-
108
-
-
0346362328
-
The 5′-3′ exoribonuclease xrn-1 is essential for ventral epithelial enclosure during C. elegans embryogenesis
-
Newbury S., and Woollard A. The 5′-3′ exoribonuclease xrn-1 is essential for ventral epithelial enclosure during C. elegans embryogenesis. RNA 10 (2004) 59-65
-
(2004)
RNA
, vol.10
, pp. 59-65
-
-
Newbury, S.1
Woollard, A.2
-
109
-
-
36248940726
-
An Hfq-like protein in archaea: Crystal structure and functional characterization of the Sm protein from Methanococcus jannaschii
-
Nielsen J.S., Boggild A., Andersen C.B., Nielsen G., Boysen A., Brodersen D.E., and Valentin-Hansen P. An Hfq-like protein in archaea: Crystal structure and functional characterization of the Sm protein from Methanococcus jannaschii. RNA 13 (2007) 2213-2223
-
(2007)
RNA
, vol.13
, pp. 2213-2223
-
-
Nielsen, J.S.1
Boggild, A.2
Andersen, C.B.3
Nielsen, G.4
Boysen, A.5
Brodersen, D.E.6
Valentin-Hansen, P.7
-
110
-
-
34247229733
-
Ataxin-2 interacts with the DEAD/H-box RNA helicase DDX6 and interferes with P-bodies and stress granules
-
Nonhoff U., Ralser M., Welzel F., Piccini I., Balzereit D., Yaspo M.L., Lehrach H., and Krobitsch S. Ataxin-2 interacts with the DEAD/H-box RNA helicase DDX6 and interferes with P-bodies and stress granules. Mol. Biol. Cell 18 (2007) 1385-1396
-
(2007)
Mol. Biol. Cell
, vol.18
, pp. 1385-1396
-
-
Nonhoff, U.1
Ralser, M.2
Welzel, F.3
Piccini, I.4
Balzereit, D.5
Yaspo, M.L.6
Lehrach, H.7
Krobitsch, S.8
-
111
-
-
0028218876
-
Point mutations in the stem-loop at the 3′ end of mouse histone mRNA reduce expression by reducing the efficiency of 3′ end formation
-
Pandey N.B., Williams A.S., Sun J.H., Brown V.D., Bond U., and Marzluff W.F. Point mutations in the stem-loop at the 3′ end of mouse histone mRNA reduce expression by reducing the efficiency of 3′ end formation. Mol. Cell. Biol. 14 (1994) 1709-1720
-
(1994)
Mol. Cell. Biol.
, vol.14
, pp. 1709-1720
-
-
Pandey, N.B.1
Williams, A.S.2
Sun, J.H.3
Brown, V.D.4
Bond, U.5
Marzluff, W.F.6
-
112
-
-
0032535451
-
A role for the yeast La protein in U6 snRNP assembly: Evidence that the La protein is a molecular chaperone for RNA polymerase III transcripts
-
Pannone B.K., Xue D., and Wolin S.L. A role for the yeast La protein in U6 snRNP assembly: Evidence that the La protein is a molecular chaperone for RNA polymerase III transcripts. EMBO J. 17 (1998) 7442-7453
-
(1998)
EMBO J.
, vol.17
, pp. 7442-7453
-
-
Pannone, B.K.1
Xue, D.2
Wolin, S.L.3
-
113
-
-
0035022015
-
Multiple functional interactions between components of the Lsm2-Lsm8 complex, U6 snRNA, and the yeast La protein
-
Pannone B.K., Kim S.D., Noe D.A., and Wolin S.L. Multiple functional interactions between components of the Lsm2-Lsm8 complex, U6 snRNA, and the yeast La protein. Genetics 158 (2001) 187-196
-
(2001)
Genetics
, vol.158
, pp. 187-196
-
-
Pannone, B.K.1
Kim, S.D.2
Noe, D.A.3
Wolin, S.L.4
-
114
-
-
33847417585
-
P bodies and the control of mRNA translation and degradation
-
Parker R., and Sheth U. P bodies and the control of mRNA translation and degradation. Mol. Cell 25 (2007) 635-646
-
(2007)
Mol. Cell
, vol.25
, pp. 635-646
-
-
Parker, R.1
Sheth, U.2
-
115
-
-
0742288008
-
The enzymes and control of eukaryotic mRNA turnover
-
Parker R., and Song H. The enzymes and control of eukaryotic mRNA turnover. Nat. Struct. Mol. Biol. 11 (2004) 121-127
-
(2004)
Nat. Struct. Mol. Biol.
, vol.11
, pp. 121-127
-
-
Parker, R.1
Song, H.2
-
116
-
-
34548317517
-
Metal determines efficiency and substrate specificity of the nuclear NUDIX decapping proteins X29 and H29K (Nudt16)
-
Peculis B.A., Reynolds K., and Cleland M. Metal determines efficiency and substrate specificity of the nuclear NUDIX decapping proteins X29 and H29K (Nudt16). J. Biol. Chem. 282 (2007) 24792-24805
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 24792-24805
-
-
Peculis, B.A.1
Reynolds, K.2
Cleland, M.3
-
117
-
-
0035477247
-
Purified U7 snRNPs lack the Sm proteins D1 and D2 but contain Lsm10, a new 14 kDa Sm D1-like protein
-
Pillai R.S., Will C.L., Luhrmann R., Schumperli D., and Muller B. Purified U7 snRNPs lack the Sm proteins D1 and D2 but contain Lsm10, a new 14 kDa Sm D1-like protein. EMBO J. 20 (2001) 5470-5479
-
(2001)
EMBO J.
, vol.20
, pp. 5470-5479
-
-
Pillai, R.S.1
Will, C.L.2
Luhrmann, R.3
Schumperli, D.4
Muller, B.5
-
118
-
-
0141818102
-
Unique Sm core structure of U7 snRNPs: Assembly by a specialized SMN complex and the role of a new component, Lsm11, in histone RNA processing
-
Pillai R.S., Grimmler M., Meister G., Will C.L., Luhrmann R., Fischer U., and Schumperli D. Unique Sm core structure of U7 snRNPs: Assembly by a specialized SMN complex and the role of a new component, Lsm11, in histone RNA processing. Genes Dev. 17 (2003) 2321-2333
-
(2003)
Genes Dev.
, vol.17
, pp. 2321-2333
-
-
Pillai, R.S.1
Grimmler, M.2
Meister, G.3
Will, C.L.4
Luhrmann, R.5
Fischer, U.6
Schumperli, D.7
-
119
-
-
0035827594
-
α-terminal acetyltransferase of yeast contains three subunits, Mak3p, Mak10p, and Mak31p
-
α-terminal acetyltransferase of yeast contains three subunits, Mak3p, Mak10p, and Mak31p. J. Biol. Chem. 276 (2001) 20154-20159
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 20154-20159
-
-
Polevoda, B.1
Sherman, F.2
-
120
-
-
0033231015
-
Identification and specificities of N-terminal acetyltransferases from Saccharomyces cerevisiae
-
Polevoda B., Norbeck J., Takakura H., Blomberg A., and Sherman F. Identification and specificities of N-terminal acetyltransferases from Saccharomyces cerevisiae. EMBO J. 18 (1999) 6155-6168
-
(1999)
EMBO J.
, vol.18
, pp. 6155-6168
-
-
Polevoda, B.1
Norbeck, J.2
Takakura, H.3
Blomberg, A.4
Sherman, F.5
-
121
-
-
0037115826
-
Genome-wide analysis of mRNA decay in resting and activated primary human T lymphocytes
-
Raghavan A., Ogilvie R.L., Reilly C., Abelson M.L., Raghavan S., Vasdewani J., Krathwohl M., and Bohjanen P.R. Genome-wide analysis of mRNA decay in resting and activated primary human T lymphocytes. Nucleic Acids Res. 30 (2002) 5529-5538
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 5529-5538
-
-
Raghavan, A.1
Ogilvie, R.L.2
Reilly, C.3
Abelson, M.L.4
Raghavan, S.5
Vasdewani, J.6
Krathwohl, M.7
Bohjanen, P.R.8
-
122
-
-
0032488860
-
A spliceosomal recycling factor that reanneals U4 and U6 small nuclear ribonucleoprotein particles
-
Raghunathan P.L., and Guthrie C. A spliceosomal recycling factor that reanneals U4 and U6 small nuclear ribonucleoprotein particles. Science 279 (1998) 857-860
-
(1998)
Science
, vol.279
, pp. 857-860
-
-
Raghunathan, P.L.1
Guthrie, C.2
-
123
-
-
0030007060
-
The snRNP core assembly pathway: Identification of stable core protein heteromeric complexes and an snRNP subcore particle in vitro
-
Raker V.A., Plessel G., and Luhrmann R. The snRNP core assembly pathway: Identification of stable core protein heteromeric complexes and an snRNP subcore particle in vitro. EMBO J. 15 (1996) 2256-2269
-
(1996)
EMBO J.
, vol.15
, pp. 2256-2269
-
-
Raker, V.A.1
Plessel, G.2
Luhrmann, R.3
-
124
-
-
12344317072
-
An integrative approach to gain insights into the cellular function of human ataxin-2
-
Ralser M., Albrecht M., Nonhoff U., Lengauer T., Lehrach H., and Krobitsch S. An integrative approach to gain insights into the cellular function of human ataxin-2. J. Mol. Biol. 346 (2005) 203-214
-
(2005)
J. Mol. Biol.
, vol.346
, pp. 203-214
-
-
Ralser, M.1
Albrecht, M.2
Nonhoff, U.3
Lengauer, T.4
Lehrach, H.5
Krobitsch, S.6
-
125
-
-
0037053430
-
Modulation of eukaryotic mRNA stability via the cap-binding translation complex eIF4F
-
Ramirez C.V., Vilela C., Berthelot K., and McCarthy J.E. Modulation of eukaryotic mRNA stability via the cap-binding translation complex eIF4F. J. Mol. Biol. 318 (2002) 951-962
-
(2002)
J. Mol. Biol.
, vol.318
, pp. 951-962
-
-
Ramirez, C.V.1
Vilela, C.2
Berthelot, K.3
McCarthy, J.E.4
-
126
-
-
0033564627
-
Sm and Sm-like proteins assemble in two related complexes of deep evolutionary origin
-
Salgado-Garrido J., Bragado-Nilsson E., Kandels-Lewis S., and Seraphin B. Sm and Sm-like proteins assemble in two related complexes of deep evolutionary origin. EMBO J. 18 (1999) 3451-3462
-
(1999)
EMBO J.
, vol.18
, pp. 3451-3462
-
-
Salgado-Garrido, J.1
Bragado-Nilsson, E.2
Kandels-Lewis, S.3
Seraphin, B.4
-
127
-
-
33747884761
-
Ataxin-2 and its Drosophila homolog, ATX2, physically assemble with polyribosomes
-
Satterfield T.F., and Pallanck L.J. Ataxin-2 and its Drosophila homolog, ATX2, physically assemble with polyribosomes. Hum. Mol. Genet. 15 (2006) 2523-2532
-
(2006)
Hum. Mol. Genet.
, vol.15
, pp. 2523-2532
-
-
Satterfield, T.F.1
Pallanck, L.J.2
-
128
-
-
0036962392
-
A Drosophila homolog of the polyglutamine disease gene SCA2 is a dosage-sensitive regulator of actin filament formation
-
Satterfield T.F., Jackson S.M., and Pallanck L.J. A Drosophila homolog of the polyglutamine disease gene SCA2 is a dosage-sensitive regulator of actin filament formation. Genetics 162 (2002) 1687-1702
-
(2002)
Genetics
, vol.162
, pp. 1687-1702
-
-
Satterfield, T.F.1
Jackson, S.M.2
Pallanck, L.J.3
-
129
-
-
0028321764
-
The site of 3′ end formation of histone messenger RNA is a fixed distance from the downstream element recognized by the U7 snRNP
-
Scharl E.C., and Steitz J.A. The site of 3′ end formation of histone messenger RNA is a fixed distance from the downstream element recognized by the U7 snRNP. EMBO J. 13 (1994) 2432-2440
-
(1994)
EMBO J.
, vol.13
, pp. 2432-2440
-
-
Scharl, E.C.1
Steitz, J.A.2
-
130
-
-
0029906831
-
Length suppression in histone messenger RNA 3′-end maturation: Processing defects of insertion mutant premessenger RNAs can be compensated by insertions into the U7 small nuclear RNA
-
Scharl E.C., and Steitz J.A. Length suppression in histone messenger RNA 3′-end maturation: Processing defects of insertion mutant premessenger RNAs can be compensated by insertions into the U7 small nuclear RNA. Proc. Natl. Acad. Sci. USA 93 (1996) 14659-14664
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 14659-14664
-
-
Scharl, E.C.1
Steitz, J.A.2
-
132
-
-
0036645689
-
Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: A bacterial Sm-like protein
-
Schumacher M.A., Pearson R.F., Moller T., Valentin-Hansen P., and Brennan R.G. Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: A bacterial Sm-like protein. EMBO J. 21 (2002) 3546-3556
-
(2002)
EMBO J.
, vol.21
, pp. 3546-3556
-
-
Schumacher, M.A.1
Pearson, R.F.2
Moller, T.3
Valentin-Hansen, P.4
Brennan, R.G.5
-
133
-
-
9744246907
-
The special Sm core structure of the U7 snRNP: Far-reaching significance of a small nuclear ribonucleoprotein
-
Schumperli D., and Pillai R.S. The special Sm core structure of the U7 snRNP: Far-reaching significance of a small nuclear ribonucleoprotein. Cell. Mol. Life Sci. 61 (2004) 2560-2570
-
(2004)
Cell. Mol. Life Sci.
, vol.61
, pp. 2560-2570
-
-
Schumperli, D.1
Pillai, R.S.2
-
134
-
-
0032778953
-
Mutations in translation initiation factors lead to increased rates of deadenylation and decapping of mRNAs in Saccharomyces cerevisiae
-
Schwartz D.C., and Parker R. Mutations in translation initiation factors lead to increased rates of deadenylation and decapping of mRNAs in Saccharomyces cerevisiae. Mol. Cell. Biol. 19 (1999) 5247-5256
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 5247-5256
-
-
Schwartz, D.C.1
Parker, R.2
-
135
-
-
0033773044
-
mRNA decapping in yeast requires dissociation of the cap binding protein, eukaryotic translation initiation factor 4E
-
Schwartz D.C., and Parker R. mRNA decapping in yeast requires dissociation of the cap binding protein, eukaryotic translation initiation factor 4E. Mol. Cell. Biol. 20 (2000) 7933-7942
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 7933-7942
-
-
Schwartz, D.C.1
Parker, R.2
-
136
-
-
0037322952
-
The enhancer of decapping proteins, Edc1p and Edc2p, bind RNA and stimulate the activity of the decapping enzyme
-
Schwartz D., Decker C.J., and Parker R. The enhancer of decapping proteins, Edc1p and Edc2p, bind RNA and stimulate the activity of the decapping enzyme. RNA 9 (2003) 239-251
-
(2003)
RNA
, vol.9
, pp. 239-251
-
-
Schwartz, D.1
Decker, C.J.2
Parker, R.3
-
137
-
-
0030745970
-
CaSm: An Sm-like protein that contributes to the transformed state in cancer cells
-
Schweinfest C.W., Graber M.W., Chapman J.M., Papas T.S., Baron P.L., and Watson D.K. CaSm: An Sm-like protein that contributes to the transformed state in cancer cells. Cancer Res. 57 (1997) 2961-2965
-
(1997)
Cancer Res.
, vol.57
, pp. 2961-2965
-
-
Schweinfest, C.W.1
Graber, M.W.2
Chapman, J.M.3
Papas, T.S.4
Baron, P.L.5
Watson, D.K.6
-
138
-
-
33845604554
-
Nucleocytoplasmic shuttling of the Rpb4p and Rpb7p subunits of Saccharomyces cerevisiae RNA polymerase II by two pathways
-
Selitrennik M., Duek L., Lotan R., and Choder M. Nucleocytoplasmic shuttling of the Rpb4p and Rpb7p subunits of Saccharomyces cerevisiae RNA polymerase II by two pathways. Eukaryot. Cell 5 (2006) 2092-2103
-
(2006)
Eukaryot. Cell
, vol.5
, pp. 2092-2103
-
-
Selitrennik, M.1
Duek, L.2
Lotan, R.3
Choder, M.4
-
139
-
-
0028997105
-
Sm and Sm-like proteins belong to a large family: Identification of proteins of the U6 as well as the U1, U2, U4, and U5 snRNPs
-
Seraphin B. Sm and Sm-like proteins belong to a large family: Identification of proteins of the U6 as well as the U1, U2, U4, and U5 snRNPs. EMBO J. 14 (1995) 2089-2098
-
(1995)
EMBO J.
, vol.14
, pp. 2089-2098
-
-
Seraphin, B.1
-
140
-
-
19644400971
-
Uridine addition after microRNA-directed cleavage
-
Shen B., and Goodman H.M. Uridine addition after microRNA-directed cleavage. Science 306 (2004) 997
-
(2004)
Science
, vol.306
, pp. 997
-
-
Shen, B.1
Goodman, H.M.2
-
141
-
-
0037968357
-
Decapping and decay of messenger RNA occur in cytoplasmic processing bodies
-
Sheth U., and Parker R. Decapping and decay of messenger RNA occur in cytoplasmic processing bodies. Science 300 (2003) 805-808
-
(2003)
Science
, vol.300
, pp. 805-808
-
-
Sheth, U.1
Parker, R.2
-
142
-
-
0034701797
-
A novel protein with RNA-binding motifs interacts with ataxin-2
-
Shibata H., Huynh D.P., and Pulst S.M. A novel protein with RNA-binding motifs interacts with ataxin-2. Hum. Mol. Genet. 9 (2000) 1303-1313
-
(2000)
Hum. Mol. Genet.
, vol.9
, pp. 1303-1313
-
-
Shibata, H.1
Huynh, D.P.2
Pulst, S.M.3
-
143
-
-
36248947229
-
3′ terminal oligo U-tract-mediated stimulation of decapping
-
Song M.G., and Kiledjian M. 3′ terminal oligo U-tract-mediated stimulation of decapping. RNA 13 (2007) 2356-2365
-
(2007)
RNA
, vol.13
, pp. 2356-2365
-
-
Song, M.G.1
Kiledjian, M.2
-
144
-
-
38349030753
-
Requirements for nuclear localization of the Lsm2-8p complex and competition between nuclear and cytoplasmic Lsm complexes
-
Spiller M.P., Reijns M.A., and Beggs J.D. Requirements for nuclear localization of the Lsm2-8p complex and competition between nuclear and cytoplasmic Lsm complexes. J. Cell Sci. 120 (2007) 4310-4320
-
(2007)
J. Cell Sci.
, vol.120
, pp. 4310-4320
-
-
Spiller, M.P.1
Reijns, M.A.2
Beggs, J.D.3
-
145
-
-
0028125325
-
3′ end processing of mouse histone pre-mRNA: Evidence for additional base-pairing between U7 snRNA and pre-mRNA
-
Spycher C., Streit A., Stefanovic B., Albrecht D., Koning T.H., and Schumperli D. 3′ end processing of mouse histone pre-mRNA: Evidence for additional base-pairing between U7 snRNA and pre-mRNA. Nucleic Acids Res. 22 (1994) 4023-4030
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4023-4030
-
-
Spycher, C.1
Streit, A.2
Stefanovic, B.3
Albrecht, D.4
Koning, T.H.5
Schumperli, D.6
-
146
-
-
0037450801
-
Targeting of U4/U6 small nuclear RNP assembly factor SART3/p110 to Cajal bodies
-
Stanek D., Rader S.D., Klingauf M., and Neugebauer K.M. Targeting of U4/U6 small nuclear RNP assembly factor SART3/p110 to Cajal bodies. J. Cell Biol. 160 (2003) 505-516
-
(2003)
J. Cell Biol.
, vol.160
, pp. 505-516
-
-
Stanek, D.1
Rader, S.D.2
Klingauf, M.3
Neugebauer, K.M.4
-
147
-
-
0029123807
-
Assembly, nuclear import and function of U7 snRNPs studied by microinjection of synthetic U7 RNA into Xenopus oocytes
-
Stefanovic B., Hackl W., Luhrmann R., and Schumperli D. Assembly, nuclear import and function of U7 snRNPs studied by microinjection of synthetic U7 RNA into Xenopus oocytes. Nucleic Acids Res. 23 (1995) 3141-3151
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 3141-3151
-
-
Stefanovic, B.1
Hackl, W.2
Luhrmann, R.3
Schumperli, D.4
-
148
-
-
0037320851
-
Analysis of recombinant yeast decapping enzyme
-
Steiger M., Carr-Schmid A., Schwartz D.C., Kiledjian M., and Parker R. Analysis of recombinant yeast decapping enzyme. RNA 9 (2003) 231-238
-
(2003)
RNA
, vol.9
, pp. 231-238
-
-
Steiger, M.1
Carr-Schmid, A.2
Schwartz, D.C.3
Kiledjian, M.4
Parker, R.5
-
149
-
-
34047132184
-
Transforming function of the LSM1 oncogene in human breast cancers with the 8p11-12 amplicon
-
Streicher K.L., Yang Z.Q., Draghici S., and Ethier S.P. Transforming function of the LSM1 oncogene in human breast cancers with the 8p11-12 amplicon. Oncogene 26 (2007) 2104-2114
-
(2007)
Oncogene
, vol.26
, pp. 2104-2114
-
-
Streicher, K.L.1
Yang, Z.Q.2
Draghici, S.3
Ethier, S.P.4
-
150
-
-
34250374824
-
Analysis of P-body assembly in Saccharomyces cerevisiae
-
Teixeira D., and Parker R. Analysis of P-body assembly in Saccharomyces cerevisiae. Mol. Biol. Cell 18 (2007) 2274-2287
-
(2007)
Mol. Biol. Cell
, vol.18
, pp. 2274-2287
-
-
Teixeira, D.1
Parker, R.2
-
151
-
-
15444379718
-
Processing bodies require RNA for assembly and contain nontranslating mRNAs
-
Teixeira D., Sheth U., Valencia-Sanchez M.A., Brengues M., and Parker R. Processing bodies require RNA for assembly and contain nontranslating mRNAs. RNA 11 (2005) 371-382
-
(2005)
RNA
, vol.11
, pp. 371-382
-
-
Teixeira, D.1
Sheth, U.2
Valencia-Sanchez, M.A.3
Brengues, M.4
Parker, R.5
-
152
-
-
0026744480
-
MAK3 encodes an N-acetyltransferase whose modification of the L-A gag NH2 terminus is necessary for virus particle assembly
-
Tercero J.C., and Wickner R.B. MAK3 encodes an N-acetyltransferase whose modification of the L-A gag NH2 terminus is necessary for virus particle assembly. J. Biol. Chem. 267 (1992) 20277-20281
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 20277-20281
-
-
Tercero, J.C.1
Wickner, R.B.2
-
153
-
-
0026730661
-
Localized mutagenesis and evidence for post-transcriptional regulation of MAK3. A putative N-acetyltransferase required for double-stranded RNA virus propagation in Saccharomyces cerevisiae
-
Tercero J.C., Riles L.E., and Wickner R.B. Localized mutagenesis and evidence for post-transcriptional regulation of MAK3. A putative N-acetyltransferase required for double-stranded RNA virus propagation in Saccharomyces cerevisiae. J. Biol. Chem. 267 (1992) 20270-20276
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 20270-20276
-
-
Tercero, J.C.1
Riles, L.E.2
Wickner, R.B.3
-
154
-
-
0027253353
-
Yeast MAK3 N-acetyltransferase recognizes the N-terminal four amino acids of the major coat protein (gag) of the L-A double-stranded RNA virus
-
Tercero J.C., Dinman J.D., and Wickner R.B. Yeast MAK3 N-acetyltransferase recognizes the N-terminal four amino acids of the major coat protein (gag) of the L-A double-stranded RNA virus. J. Bacteriol. 175 (1993) 3192-3194
-
(1993)
J. Bacteriol.
, vol.175
, pp. 3192-3194
-
-
Tercero, J.C.1
Dinman, J.D.2
Wickner, R.B.3
-
155
-
-
0035930337
-
Targeting an mRNA for decapping: Displacement of translation factors and association of the Lsm1p-7p complex on deadenylated yeast mRNAs
-
Tharun S., and Parker R. Targeting an mRNA for decapping: Displacement of translation factors and association of the Lsm1p-7p complex on deadenylated yeast mRNAs. Mol. Cell 8 (2001) 1075-1083
-
(2001)
Mol. Cell
, vol.8
, pp. 1075-1083
-
-
Tharun, S.1
Parker, R.2
-
156
-
-
20444385353
-
Turnover of mRNA in eukaryotic cells
-
Soll D., Nishimura S., and Moore P. (Eds), Pergamon, Elmsford
-
Tharun S., and Parker R. Turnover of mRNA in eukaryotic cells. In: Soll D., Nishimura S., and Moore P. (Eds). RNA (2001), Pergamon, Elmsford 245-257
-
(2001)
RNA
, pp. 245-257
-
-
Tharun, S.1
Parker, R.2
-
157
-
-
0034732089
-
Yeast Sm-like proteins function in mRNA decapping and decay
-
Tharun S., He W., Mayes A.E., Lennertz P., Beggs J.D., and Parker R. Yeast Sm-like proteins function in mRNA decapping and decay. Nature 404 (2000) 515-518
-
(2000)
Nature
, vol.404
, pp. 515-518
-
-
Tharun, S.1
He, W.2
Mayes, A.E.3
Lennertz, P.4
Beggs, J.D.5
Parker, R.6
-
158
-
-
20444429430
-
Mutations in the Saccharomyces cerevisiae LSM1 gene that affect mRNA decapping and 3′ end protection
-
Tharun S., Muhlrad D., Chowdhury A., and Parker R. Mutations in the Saccharomyces cerevisiae LSM1 gene that affect mRNA decapping and 3′ end protection. Genetics 170 (2005) 33-46
-
(2005)
Genetics
, vol.170
, pp. 33-46
-
-
Tharun, S.1
Muhlrad, D.2
Chowdhury, A.3
Parker, R.4
-
159
-
-
0032415357
-
Identification and developmental expression of a 5′-3′ exoribonuclease from Drosophila melanogaster
-
Till D.D., Linz B., Seago J.E., Elgar S.J., Marujo P.E., Elias M.L., Arraiano C.M., McClellan J.A., McCarthy J.E., and Newbury S.F. Identification and developmental expression of a 5′-3′ exoribonuclease from Drosophila melanogaster. Mech. Dev. 79 (1998) 51-55
-
(1998)
Mech. Dev.
, vol.79
, pp. 51-55
-
-
Till, D.D.1
Linz, B.2
Seago, J.E.3
Elgar, S.J.4
Marujo, P.E.5
Elias, M.L.6
Arraiano, C.M.7
McClellan, J.A.8
McCarthy, J.E.9
Newbury, S.F.10
-
160
-
-
0033544937
-
Identification of a U8 snoRNA-specific binding protein
-
Tomasevic N., and Peculis B. Identification of a U8 snoRNA-specific binding protein. J. Biol. Chem. 274 (1999) 35914-35920
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 35914-35920
-
-
Tomasevic, N.1
Peculis, B.2
-
161
-
-
0036261559
-
Xenopus LSm proteins bind U8 snoRNA via an internal evolutionarily conserved octamer sequence
-
Tomasevic N., and Peculis B.A. Xenopus LSm proteins bind U8 snoRNA via an internal evolutionarily conserved octamer sequence. Mol. Cell. Biol. 22 (2002) 4101-4112
-
(2002)
Mol. Cell. Biol.
, vol.22
, pp. 4101-4112
-
-
Tomasevic, N.1
Peculis, B.A.2
-
162
-
-
0035341325
-
RNA binding in an Sm core domain: X-ray structure and functional analysis of an archaeal Sm protein complex
-
Toro I., Thore S., Mayer C., Basquin J., Seraphin B., and Suck D. RNA binding in an Sm core domain: X-ray structure and functional analysis of an archaeal Sm protein complex. EMBO J. 20 (2001) 2293-2303
-
(2001)
EMBO J.
, vol.20
, pp. 2293-2303
-
-
Toro, I.1
Thore, S.2
Mayer, C.3
Basquin, J.4
Seraphin, B.5
Suck, D.6
-
163
-
-
37549051318
-
A divergent Sm fold in EDC3 proteins mediates DCP1 binding and P-body targeting
-
Tritschler F., Eulalio A., Truffault V., Hartmann M.D., Helms S., Schmidt S., Coles M., Izaurralde E., and Weichenrieder O. A divergent Sm fold in EDC3 proteins mediates DCP1 binding and P-body targeting. Mol. Cell. Biol. 27 (2007) 8600-8611
-
(2007)
Mol. Cell. Biol.
, vol.27
, pp. 8600-8611
-
-
Tritschler, F.1
Eulalio, A.2
Truffault, V.3
Hartmann, M.D.4
Helms, S.5
Schmidt, S.6
Coles, M.7
Izaurralde, E.8
Weichenrieder, O.9
-
164
-
-
0035830508
-
The transcription factor associated Ccr4 and Caf1 proteins are components of the major cytoplasmic mRNA deadenylase in Saccharomyces cerevisiae
-
Tucker M., Valencia-Sanchez M.A., Staples R.R., Chen J., Denis C.L., and Parker R. The transcription factor associated Ccr4 and Caf1 proteins are components of the major cytoplasmic mRNA deadenylase in Saccharomyces cerevisiae. Cell 104 (2001) 377-386
-
(2001)
Cell
, vol.104
, pp. 377-386
-
-
Tucker, M.1
Valencia-Sanchez, M.A.2
Staples, R.R.3
Chen, J.4
Denis, C.L.5
Parker, R.6
-
165
-
-
30044431985
-
RNA emerging from the active site of RNA polymerase II interacts with the Rpb7 subunit
-
Ujvari A., and Luse D.S. RNA emerging from the active site of RNA polymerase II interacts with the Rpb7 subunit. Nat. Struct. Mol. Biol. 13 (2006) 49-54
-
(2006)
Nat. Struct. Mol. Biol.
, vol.13
, pp. 49-54
-
-
Ujvari, A.1
Luse, D.S.2
-
166
-
-
0037121926
-
Human Dcp2: A catalytically active mRNA decapping enzyme located in specific cytoplasmic structures
-
Van Dijk E., Cougot N., Meyer S., Babajko S., Wahle E., and Seraphin B. Human Dcp2: A catalytically active mRNA decapping enzyme located in specific cytoplasmic structures. EMBO J. 21 (2002) 6915-6924
-
(2002)
EMBO J.
, vol.21
, pp. 6915-6924
-
-
Van Dijk, E.1
Cougot, N.2
Meyer, S.3
Babajko, S.4
Wahle, E.5
Seraphin, B.6
-
167
-
-
0034663782
-
The eukaryotic mRNA decapping protein Dcp1 interacts physically and functionally with the eIF4F translation initiation complex
-
Vilela C., Velasco C., Ptushkina M., and McCarthy J.E. The eukaryotic mRNA decapping protein Dcp1 interacts physically and functionally with the eIF4F translation initiation complex. EMBO J. 19 (2000) 4372-4382
-
(2000)
EMBO J.
, vol.19
, pp. 4372-4382
-
-
Vilela, C.1
Velasco, C.2
Ptushkina, M.3
McCarthy, J.E.4
-
168
-
-
0035861864
-
Functional link between the mammalian exosome and mRNA decapping
-
Wang Z., and Kiledjian M. Functional link between the mammalian exosome and mRNA decapping. Cell 107 (2001) 751-762
-
(2001)
Cell
, vol.107
, pp. 751-762
-
-
Wang, Z.1
Kiledjian, M.2
-
169
-
-
0029839610
-
The protein that binds the 3′ end of histone mRNA: A novel RNA-binding protein required for histone pre-mRNA processing
-
Wang Z.F., Whitfield M.L., Ingledue III T.C., Dominski Z., and Marzluff W.F. The protein that binds the 3′ end of histone mRNA: A novel RNA-binding protein required for histone pre-mRNA processing. Genes Dev. 10 (1996) 3028-3040
-
(1996)
Genes Dev.
, vol.10
, pp. 3028-3040
-
-
Wang, Z.F.1
Whitfield, M.L.2
Ingledue III, T.C.3
Dominski, Z.4
Marzluff, W.F.5
-
170
-
-
0037197892
-
Precision and functional specificity in mRNA decay
-
Wang Y., Liu C.L., Storey J.D., Tibshirani R.J., Herschlag D., and Brown P.O. Precision and functional specificity in mRNA decay. Proc. Natl. Acad. Sci. USA 99 (2002) 5860-5865
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 5860-5865
-
-
Wang, Y.1
Liu, C.L.2
Storey, J.D.3
Tibshirani, R.J.4
Herschlag, D.5
Brown, P.O.6
-
172
-
-
0033229970
-
The economics of ribosome biosynthesis in yeast
-
Warner J.R. The economics of ribosome biosynthesis in yeast. Trends Biochem. Sci. 24 (1999) 437-440
-
(1999)
Trends Biochem. Sci.
, vol.24
, pp. 437-440
-
-
Warner, J.R.1
-
173
-
-
0029942532
-
Double-stranded RNA viruses of Saccharomyces cerevisiae
-
Wickner R.B. Double-stranded RNA viruses of Saccharomyces cerevisiae. Microbiol. Rev. 60 (1996) 250-265
-
(1996)
Microbiol. Rev.
, vol.60
, pp. 250-265
-
-
Wickner, R.B.1
-
174
-
-
0035370526
-
Spliceosomal UsnRNP biogenesis, structure and function
-
Will C.L., and Luhrmann R. Spliceosomal UsnRNP biogenesis, structure and function. Curr. Opin. Cell Biol. 13 (2001) 290-301
-
(2001)
Curr. Opin. Cell Biol.
, vol.13
, pp. 290-301
-
-
Will, C.L.1
Luhrmann, R.2
-
175
-
-
0037634375
-
Identification of both shared and distinct proteins in the major and minor spliceosomes
-
Will C.L., Schneider C., Reed R., and Luhrmann R. Identification of both shared and distinct proteins in the major and minor spliceosomes. Science 284 (1999) 2003-2005
-
(1999)
Science
, vol.284
, pp. 2003-2005
-
-
Will, C.L.1
Schneider, C.2
Reed, R.3
Luhrmann, R.4
-
176
-
-
4444324795
-
Bringing the role of mRNA decay in the control of gene expression into focus
-
Wilusz C.J., and Wilusz J. Bringing the role of mRNA decay in the control of gene expression into focus. Trends Genet. 20 (2004) 491-497
-
(2004)
Trends Genet.
, vol.20
, pp. 491-497
-
-
Wilusz, C.J.1
Wilusz, J.2
-
177
-
-
28544442127
-
Eukaryotic Lsm proteins: Lessons from bacteria
-
Wilusz C.J., and Wilusz J. Eukaryotic Lsm proteins: Lessons from bacteria. Nat. Struct. Mol. Biol. 12 (2005) 1031-1036
-
(2005)
Nat. Struct. Mol. Biol.
, vol.12
, pp. 1031-1036
-
-
Wilusz, C.J.1
Wilusz, J.2
-
178
-
-
0034761729
-
Poly(A)-binding proteins regulate both mRNA deadenylation and decapping in yeast cytoplasmic extracts
-
Wilusz C.J., Gao M., Jones C.L., Wilusz J., and Peltz S.W. Poly(A)-binding proteins regulate both mRNA deadenylation and decapping in yeast cytoplasmic extracts. RNA 7 (2001) 1416-1424
-
(2001)
RNA
, vol.7
, pp. 1416-1424
-
-
Wilusz, C.J.1
Gao, M.2
Jones, C.L.3
Wilusz, J.4
Peltz, S.W.5
-
179
-
-
0034012159
-
Deletion of the PAT1 gene affects translation initiation and suppresses a PAB1 gene deletion in yeast
-
Wyers F., Minet M., Dufour M.E., Vo L.T., and Lacroute F. Deletion of the PAT1 gene affects translation initiation and suppresses a PAB1 gene deletion in yeast. Mol. Cell. Biol. 20 (2000) 3538-3549
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 3538-3549
-
-
Wyers, F.1
Minet, M.2
Dufour, M.E.3
Vo, L.T.4
Lacroute, F.5
-
180
-
-
28544450636
-
Concerted action of poly(A) nucleases and decapping enzyme in mammalian mRNA turnover
-
Yamashita A., Chang T.C., Yamashita Y., Zhu W., Zhong Z., Chen C.Y., and Shyu A.B. Concerted action of poly(A) nucleases and decapping enzyme in mammalian mRNA turnover. Nat. Struct. Mol. Biol. 12 (2005) 1054-1063
-
(2005)
Nat. Struct. Mol. Biol.
, vol.12
, pp. 1054-1063
-
-
Yamashita, A.1
Chang, T.C.2
Yamashita, Y.3
Zhu, W.4
Zhong, Z.5
Chen, C.Y.6
Shyu, A.B.7
-
181
-
-
0041523923
-
Decay rates of human mRNAs: Correlation with functional characteristics and sequence attributes
-
Yang E., van Nimwegen E., Zavolan M., Rajewsky N., Schroeder M., Magnasco M., and Darnell Jr. J.E. Decay rates of human mRNAs: Correlation with functional characteristics and sequence attributes. Genome Res. 13 (2003) 1863-1872
-
(2003)
Genome Res.
, vol.13
, pp. 1863-1872
-
-
Yang, E.1
van Nimwegen, E.2
Zavolan, M.3
Rajewsky, N.4
Schroeder, M.5
Magnasco, M.6
Darnell Jr., J.E.7
-
182
-
-
33846209170
-
Multiple interacting oncogenes on the 8p11-p12 amplicon in human breast cancer
-
Yang Z.Q., Streicher K.L., Ray M.E., Abrams J., and Ethier S.P. Multiple interacting oncogenes on the 8p11-p12 amplicon in human breast cancer. Cancer Res. 66 (2006) 11632-11643
-
(2006)
Cancer Res.
, vol.66
, pp. 11632-11643
-
-
Yang, Z.Q.1
Streicher, K.L.2
Ray, M.E.3
Abrams, J.4
Ethier, S.P.5
-
183
-
-
18144402771
-
Reconstitution of two recombinant LSm protein complexes reveals aspects of their architecture, assembly, and function
-
Zaric B., Chami M., Remigy H., Engel A., Ballmer-Hofer K., Winkler F.K., and Kambach C. Reconstitution of two recombinant LSm protein complexes reveals aspects of their architecture, assembly, and function. J. Biol. Chem. 280 (2005) 16066-16075
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 16066-16075
-
-
Zaric, B.1
Chami, M.2
Remigy, H.3
Engel, A.4
Ballmer-Hofer, K.5
Winkler, F.K.6
Kambach, C.7
-
184
-
-
0037373095
-
Phosphorylation of stem-loop binding protein (SLBP) on two threonines triggers degradation of SLBP, the sole cell cycle-regulated factor required for regulation of histone mRNA processing, at the end of S phase
-
Zheng L., Dominski Z., Yang X.C., Elms P., Raska C.S., Borchers C.H., and Marzluff W.F. Phosphorylation of stem-loop binding protein (SLBP) on two threonines triggers degradation of SLBP, the sole cell cycle-regulated factor required for regulation of histone mRNA processing, at the end of S phase. Mol. Cell. Biol. 23 (2003) 1590-1601
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 1590-1601
-
-
Zheng, L.1
Dominski, Z.2
Yang, X.C.3
Elms, P.4
Raska, C.S.5
Borchers, C.H.6
Marzluff, W.F.7
|