PS II model-based simulations of single turnover flash-induced transients of fluorescence yield monitored within the time domain of 100 ns-10 s on dark-adapted Chlorella pyrenoidosa cells

Photosynthesis Research

Volumn 98, Issue 1-3, 2008, Pages 105-119

  Belyaeva, N E ^a   Schmitt, F J ^b   Steffen, R ^b   Paschenko, V Z ^a   Riznichenko, G Yu ^a   Chemeris, Yu K ^a   Renger, G ^b   Rubin, A B ^a  

^a MOSCOW STATE UNIVERSITY   (Russian Federation)

^b TECHNISCHE UNIVERSITÄT BERLIN   (Germany)

Author keywords

Dissipative energy losses; Electron transfer; Fluorescence yield; Model simulation; Photosystem II; Single turnover flash

Indexed keywords

ADAPTATION; ARTICLE; BIOLOGICAL MODEL; CHLORELLA; COMPUTER SIMULATION; DARKNESS; FLUORESCENCE; METABOLISM; NANOTECHNOLOGY; PHOTOSYNTHESIS; PHOTOSYSTEM II; PHYSIOLOGY; TIME;

ADAPTATION, PHYSIOLOGICAL; CHLORELLA; COMPUTER SIMULATION; DARKNESS; FLUORESCENCE; MODELS, BIOLOGICAL; NANOTECHNOLOGY; PHOTOSYNTHESIS; PHOTOSYSTEM II PROTEIN COMPLEX; TIME FACTORS;

ALGAE; CHLORELLA PYRENOIDOSA;

EID: 57849153406     PISSN: 01668595     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11120-008-9374-2     Document Type: Article

References (68)

1. E Baake JP Shloeder 1992 Modelling the fast fluorescence rise of photosynthesis Bull Math Biol 54 999 1021
2. Belyaeva NE (2004) Generalized model of primary photosynthetic processes in chloroplasts. PhD thesis, Moscow
3. Belyaeva NE, Lebedeva GV, Riznichenko GYu (2003) Kinetic model of primary photosynthetic processes in chloroplasts. Modeling of thylakoid membranes electric potential. In: Riznichenko GYu (ed) Mathematics computer education, vol 10. Progress-Traditsiya, Moscow, pp 263-276
4. NE Belyaeva VZ Pashchenko G Renger GY Riznichenko AB Rubin 2006 Application of a photosystem II model for analysis of fluorescence induction curves in the 100 ns to 10 s time domain after excitation with a saturating light pulse Biophysics 51 860 872
5. - in different photosystem II preparations from higher plants Photochem Photobiol 59 566 573
6. A Bergmann HJ Eichler HJ Eckert G Renger 1998 Picosecond laser-fluorometer with simultaneous time- and wavelength resolution for monitoring decay spectra of photoinhibited photosystem II particles at 277 K and 10 K Photosynth Res 58 305 312
7. 2-evolving complex Biochim Biophys Acta 766 403 415
8. AA Bulychev WJ Vredenberg 1999 Light-triggered electrical events in the thylakoid membrane of plant chloroplast Physiol Plant 105 577 584
9. AA Bulychev WJ Vredenberg 2001 Modulation of photosystem II chlorophyll fluorescence by electrogenic events generated by photosystem I Bioelectrochemistry 54 157 168
10. AA Bulychev MM Niyazova AB Rubin 1987 Fluorescence changes of chloroplasts caused by the shifts of membrane-potential and their dependence on the redox state of the acceptor of photosystem II Biolog Membr 4 262 269
11. YuK Chemeris NS Korol'kov NKh Seifullina AB Rubin 2004 PSII complexes with destabilized primary quinone acceptor of electrons in dark-adapted chlorella Russ J Plant Physiol 51 9 14
12. •+ reduction kinetics and redox transition probability of the water oxidizing complex as a function of pH and H/D isotope exchange in spinach thylakoids Biochemistry 38 6082 6092
13. G Christen R Steffen G Renger 2000 Delayed fluorescence emitted from light harvesting complex II and photosystem II of higher plants in the 100 ns-5μs time domain FEBS Lett 475 103 106
14. AR Crofts CA Wraight 1983 The electrochemical domain of photosynthesis Biochim Biophys Acta 726 149 185
15. JA Cruz CA Sacksteder A Kanazawa DM Kramer 2001 Contribution of electric field (ΔΨ) to steady-state transthylakoid proton motive force (pmf) in vivo and in vitro control of pmf parsing into ΔΨ and ΔpH by ionic strength Biochemistry 40 1226 1237
16. H Dau 1994 Short-term adaptation of plants to changing light intensities and its relation to photosystem II photochemistry and fluorescence emission J Photochem Photobiol B Biol 26 3 27
17. H Dau K Sauer 1992 Electric field effect on the picosecond fluorescence of photosystem II and its relation to the energetics and kinetics of primary charge separation Biochim Biophys Acta 1102 91 106
18. 2-evolving PS-II membrane-fragments at different redox states Si of the water oxidizing system FEBS Lett 236 425 431
19. A Biophys J 80 1617 1630
20. Gizzatkulov N, Klimov A, Lebedeva G, Demin O (2004) DBsolve7: new update version to develop and analyze models of complex biological systems. ISMB/ECCB conference, Glasgow, Scotland, UK, 31 July-5 Aug 2004. http://www.insysbio.ru
21. C-H Goh U Schreiber R Hedrich 1999 New approach of monitoring changes in chlorophyll a fluorescence of single guard cells and protoplasts in response to physiological stimuli Plant Cell Environ 22 1057 1070
22. Govindjee (ed) (1982) Photosynthesis, vol 2. Academic Press, New York
23. AB Hope RR Huilgol M Panizza M Thompson DB Matthews 1992 The flash-induced turnover of cytochrome b-563, cytochrome f and plastocyanin in chloroplasts. Model and estimation of kinetic parameters Biochim Biophys Acta 1100 15 26
24. CR Ireland SP Long NR Baker 1984 The relationship between carbon dioxide fixation and chlorophyll a fluorescence during induction of photosynthesis in maize leaves at different temperatures and carbon dioxide concentration Planta 160 550 558
25. J Kamali GV Lebedeva OV Demin NE Belyaeva GYu Riznichenko AB Rubin 2004 Kinetic model of cytochrome bf complex. Fitting of model parameters to experimental data Biofizika (Russ) 49 1061 1068
26. VA Karavaev AK Kukushkin 1993 Theoretical model of light and dark processes of photosynthesis: the problem of regulation Biophysics 38 987 1003
27. J Kern G Renger 2007 Photosystem II: structure and mechanism of the water:plastoquinone oxidoreductase Photosynth Res 94 183 202
28. +• reduction pattern and its temperature dependence in oxygen evolving PS II core complexes from thermophilic cyanobacteria and higher plants Phys Chem Chem Phys 6 4838 4843
29. PD Laible W Zipfel TG Owens 1994 Excited state dynamics in chlorophyll-based antennae: the role of transfer equilibrium Biophys J 66 844 860
30. A Laisk DA Walker 1989 A mathematical model of electron transport. Thermodynamic necessity for photosystem II regulation Proc R Soc Lond B237 417 444
31. J Lavergne HW Trissl 1995 Theory of fluorescence induction in photosystem II Biophys J 68 2474 2492
32. D Lazar 2003 Chlorophyll a fluorescence rise induced by high light illumination of dark-adapted plant tissue studied by means of a model of photosystem II and considering photosystem II heterogeneity J Theor Biol 220 469 503
33. D Lazar 2006 The polyphasic chlorophyll a fluorescence rise measured under high intensity of exciting light Funct Plant Biol 33 9 30
34. GV Lebedeva NE Belyaeva GYu Riznichenko AB Rubin OV Demin 2000 Kinetic model of photosystem II of higher green plants Russ J Phys Chem 74 1702 1710
35. GV Lebedeva NE Belyaeva OV Demin GYu Riznichenko AB Rubin 2002 Kinetic model of primary photosynthetic processes in chloroplasts. Description of the fast phase of chlorophyll fluorescence induction under different light intensities Biophysics 47 968 980
36. W Leibl J Breton J Deprez HW Trissl 1989 Photoelectric study on the kinetics of trapping and charge stabilization in oriented PS II membranes Photosynth Res 22 257 275
37. -2 of the water oxidase in isolated spinach thylakoids Biochemistry 32 9379 9386
38. Messinger J, Renger G (2008) Photosynthetic water splitting. In: Renger G (ed) Primary processes of photosynthesis: basic principles and apparatus, vol II: reaction centers/photosystems. Electron transport chains, photophosphorylation and evolution. Royal Society Chemistry, Cambridge, pp 295-352
39. C Neubauer U Schreiber 1987 The polyphasic rise of chlorophyll fluorescence upon onset of strong continuous illumination: I. Saturation characteristics and partial control by the photosystem II acceptor side Z Naturforsch C 42 1246 1254
40. Papageorgiou GC, Govindjee (2004) Chlorophyll a fluorescence: a signature of photosynthesis. Springer, Berlin
41. F Rappaport A Cuni L Xiong R Sayre J Lavergne 2005 Charge recombination and thermoluminescence in photosystem II Biophys J 88 1948 1958
42. G Renger 2001 Photosynthetic water oxidation to molecular oxygen: apparatus and mechanism Biochim Biophys Acta 1503 210 228
43. Renger G, Holzwarth AR (2005) Primary electron transfer. In: Wydrzynski T, Satoh K (eds) Photosystem II: the light driven water:plastoquinone oxidoreductase. Advances in photosynthesis and respiration, vol 22. Springer, Dordrecht, pp 139-175
44. G Renger A Schulze 1985 Quantitative analysis of fluorescence induction curves in isolated spinach chloroplasts Photobiochem Photobiophys 9 79 87
45. G Renger HJ Eckert A Bergmann J Bernarding B Liu A Napiwotzki F Reifarth HJ Eichler 1995 Fluorescence and spectroscopic studies on exciton trapping and electron transfer in photosystem II of higher plants Aust J Plant Physiol 22 167 181
46. IA Reynolds EA Johnson C Tanford 1985 Incorporation of membrane potential into theoretical analysis of electrogenic ion pumps Proc Natl Acad Sci USA 82 6869 6873
47. GYu Riznichenko GV Lebedeva OV Demin AB Rubin 1999 Kinetic mechanisms of biological regulation in photosynthetic organisms J Biol Phys 25 177 192
48. TA Roelofs CH Lee AR Holzwarth 1992 Global target analysis of picosecond chlorophyll fluorescence kinetic from pea chloroplasts Biophys J 61 1147 1163
49. GH Schatz H Brock AR Holzwarth 1988 Kinetic and energetic model for the primary processes in photosystem II Biophys J 54 397 405
50. R Schödel KD Irrgang J Voigt G Renger 1998 Rate of carotenoid triplet formation in solubilized light-harvesting complex II (LHCII) from spinach Biophys J 75 3143 3153
51. R Schödel KD Irrgang J Voigt G Renger 1999 Quenching of chlorophyll fluorescence by triplets in solubilized light-harvesting complex II (LHCII) Biophys J 76 2238 2248
52. U Schreiber A Krieger 1996 Two fundamentally different types of variable chlorophyll fluorescence in vivo FEBS Lett 397 131 135
53. U Schreiber U Schliwa W Bilger 1986 Continuous recording of photochemical and nonphotochemical fluorescence quenching with a new type of modulation fluorometre Photosynth Res 10 51 62
54. VA Shuvalov VV Klimov E Dolan WW Parson B Ke 1980 Nanosecond fluorescence and absorbance changes in photosystem II at low redox potential FEBS Lett 118 279 282
55. Steffen R (2003) Time-resolved spectroscopic investigations of photosystem II. PhD thesis, Berlin
56. R Steffen G Christen G Renger 2001 Time-resolved monitoring of flash-induced changes of fluorescence quantum yield and decay of delayed light emission in oxygen-evolving photosynthetic organisms Biochemistry 40 173 180
57. R Steffen HJ Eckert AA Kelly P Dormann G Renger 2005 Investigations on the reaction pattern of photosystem II in leaves from Arabidopsis thaliana by time-resolved fluorometric analysis Biochemistry 44 3123 3133
58. R Steffen AA Kelly J Huyer P Doermann G Renger 2005 Investigations on the reaction pattern of photosystem II in leaves from Arabidopsis thaliana wild type plants and mutants with genetically modified lipid content Biochemistry 44 3134 3142
59. A Stirbet Govindjee BJ Strasser RJ Strasser 1998 Chlorophyll a fluorescence induction in higher plants: modeling and numerical simulation J Theor Biol 193 131 151
60. RJ Strasser A Srivastava Govindgee 1995 Polyphasic chlorophyll a fluorescence transient in plants and cyanobacteria Photochem Photobiol 61 32 42
61. Strasser RJ, Tsimilli-Michael M, Srivastava A (2004) Analysis of the chlorophyll a fluorescence transient. In: Papageorgiou GC, Govindjee (eds) Chlorophyll fluorescence: a signature of photosynthesis. Advances in photosynthesis and respiration, vol 19. Kluwer Academic Publishers, The Netherlands, pp 321-362
62. M) is independent of the redox state of the plastoquinone pool: a DCMU inhibition study Biochim Biophys Acta 1708 275 282
63. O van Kooten JFH Snel WJ Vredenberg 1986 Free energy transduction related to the electric potential changes across the thylakoid membrane Photosynth Res 9 211 227
64. - recombination in photosystem II Biochim Biophys Acta 1276 35 44
65. WCJ Vermaas G Renger G Dohnt 1984 The reduction of the oxygen-evolving system in chloroplasts by thylakoid components Biochim Biophys Acta 764 194 202
66. WJ Vredenberg 2000 A 3-state model for energy trapping and fluorescence in PS II incorporating radical pair recombination Biophys J 79 26 38
67. WJ Vredenberg AA Bulychev 2003 Photoelectric effects on chlorophyll fluorescence of photosystem II in vivo. Kinetic in the absence and presence of valinomycin Bioelectrochemistry 60 87 95
68. XG Zhu Govindjee NR Baker E deSturler DR Ort SP Long 2005 Chlorophyll a fluorescence induction kinetics in leaves predicted from a model describing each discrete step of excitation energy and electron transfer associated with photosystem II Planta 223 114 133