D1-arginine257 mutants (R257E, K, and Q) of Chlamydomonas reinhardtii have a lowered QB redox potential: Analysis of thermoluminescence and fluorescence measurements

Photosynthesis Research

Volumn 98, Issue 1-3, 2008, Pages 449-468

  Rose, Stuart ^a   Minagawa, Jun ^b   Seufferheld, Manfredo ^a   Padden, Sean ^a   Svensson, Bengt ^c   Kolling, Derrick R J ^d   Crofts, Antony R ^a   Govindjee, ^a  

^a UNIVERSITY OF ILLINOIS AT URBANA CHAMPAIGN   (United States)

^b HOKKAIDO UNIVERSITY   (Japan)

^c UNIVERSITY OF MINNESOTA   (United States)

^d PRINCETON UNIVERSITY   (United States)

Author keywords

Bicarbonate in Photosystem II; Chlorophyll a fluorescence yield decay; D1 R257 mutants; Electron acceptor side of Photosystem II; Theory of thermoluminescence; Thermoluminescence

Indexed keywords

BENZOQUINONE; BENZOQUINONE DERIVATIVE; CHLOROPHYLL; CHLOROPHYLL A; DIURON; OXYGEN; PHOTOSYSTEM II, PSBA SUBUNIT; PLASTOQUINONE;

AMINO ACID SUBSTITUTION; ANIMAL; ARTICLE; CHEMICAL MODEL; CHLAMYDOMONAS REINHARDTII; COMPARATIVE STUDY; FLUORESCENCE; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; OXIDATION REDUCTION REACTION; PHOTOSYNTHESIS; PHOTOSYSTEM II; SITE DIRECTED MUTAGENESIS; ULTRAVIOLET RADIATION;

AMINO ACID SUBSTITUTION; ANIMALS; BENZOQUINONES; CHLAMYDOMONAS REINHARDTII; CHLOROPHYLL; DIURON; FLUORESCENCE; MODELS, CHEMICAL; MUTAGENESIS, SITE-DIRECTED; OXIDATION-REDUCTION; OXYGEN; PHOTOSYNTHESIS; PHOTOSYSTEM II PROTEIN COMPLEX; PLASTOQUINONE; ULTRAVIOLET RAYS;

CHLAMYDOMONAS REINHARDTII;

EID: 57849125414     PISSN: 01668595     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11120-008-9351-9     Document Type: Article

References (70)

1. J Amesz DC Fork 1967 Quenching of chlorophyll fluorescence by quinones in algae and chloroplasts Biochim Biophys Acta 143 97 107 10.1016/0005-2728(67) 90114-4
2. DJ Blubaugh Govindjee 1988 The molecular mechanism of the bicarbonate effect at the plastoquinone reductase site of photosynthesis Photosynth Res 19 85 128 10.1007/BF00114571
3. JM Bowes AR Crofts 1980 Binary oscillations in the rate of reoxidation of the primary acceptor of Photosystem-II Biochim Biophys Acta 590 373 384 10.1016/0005-2728(80)90208-X
4. JM Bowes AR Crofts 1981 Effect of DBMIB on the secondary electron acceptor B of Photosystem II Arch Biochem Biophys 209 682 686 10.1016/0003-9861(81)90329-5
5. J Bowyer M Hilton J Whitelegge P Jewess P Camilleri A Crofts 1990 Molecular modeling studies on the binding of phenylurea inhibitors to the D1 protein of Photosystem II Z Naturforsch 45c 379 387
6. B Bouges-Bocquet 1973 Electron transfer between two photosystems in spinach chloroplasts Biochim Biophys Acta 314 250 256 10.1016/0005-2728(73) 90140-0
7. AR Crofts CA Wraight DE Fleischman 1971 Energy conservation in the photochemical reactions of photosynthesis and its relation to delayed fluorescence FEBS Lett 15 89 100 10.1016/0014-5793(71)80031-5
8. Crofts AR, Robinson HH, Andrews K, Van Doren S, Berry E (1987) Catalytic sites for reduction and oxidation of quinones. In: Papa S, Chance B, Ernster L (eds) Cytochrome systems: molecular biology and bioenergetics. Plenum Publ, New York, pp 617-624
9. B in wild-type and herbicide-resistant mutants of C. reinhardtii Z Naturforsch 48c 259 266
10. A Cuni L Xiong R Sayre F Rappaport J Lavergne 2004 Modification of the pheophytin midpoint potential in Photosystem II: modulation of the quantum yield of charge separation and of charge recombination pathways Phys Chem Chem Phys 6 4825 4831 10.1039/b407511k
11. D De Vault Govindjee 1990 Photosynthetic glow peaks and their relationship with the free-energy changes Photosynth Res 24 175 181
12. D De Vault Govindjee W Arnold 1983 Energetics of photosynthetic glow peaks Proc Natl Acad Sci USA 80 983 987 10.1073/pnas.80.4.983
13. J-M Ducruet V Peeva M Havaux 2007 Chlorophyll thermofluorescence and thermoluminescence as complementary tools for the study of stress in plants Photosynth Res 93 159 171 10.1007/s11120-007-9132-x
14. JJ Eaton-Rye Govindjee 1988 Electron transfer through the quinone acceptor complex of Photosystem II in bicarbonate-depleted spinach thylakoid membranes as a function of actinic flash number and frequency Biochim Biophys Acta 935 237 247 10.1016/0005-2728(88)90220-4
15. JJ Eaton-Rye Govindjee 1988 Electron transfer through the quinone acceptor complex of Photosystem II after one or two actinic flashes in bicarbonate-depleted spinach thylakoid membranes Biochim Biophys Acta 935 248 257 10.1016/0005-2728(88)90221-6
16. KN Ferreira TM Iverson K Maghlaoui J Barber S Iwata 2004 Architecture of the photosynthetic oxygen-evolving center Science 303 1831 1838 10.1126/science.1093087
17. DS Gorman RP Levine 1965 Cytochrome f and plastocyanin: their sequence in the photosynthetic electron transport chain of Chlamydomonas reinhardtii Proc Natl Acad Sci USA 54 1665 1669 10.1073/pnas.54.6.1665
18. Govindjee, Van Rensen JJS (1993) Photosystem II reaction centers and bicarbonate. In: Deisenhofer J, Norris JR (eds) Photosynthetic reaction centers, vol 1. Academic, Orlando, pp 357-389
19. Govindjee MPJ Pulles R Govindjee HJ van Gorkom LNM Duysens 1976 Inhibition of the reoxidation of the secondary electron acceptor of Photosystem II by bicarbonate depletion Biochim Biophys Acta 449 602 605
20. Harris EH (1988) The Chlamydomonas sourcebook: a comprehensive guide to biology and laboratory use. Academic, San Diego
21. W Humphrey A Dalke K Schulten 1996 VMD-visual molecular dynamics J Mol Graph 14 33 38 10.1016/0263-7855(96)00018-5
22. Inoue Y (1996) Photosynthetic thermoluminescence as a simple probe of Photosystem II electron transport. In: Amesz J, Hoff AJ (eds) Biophysical techniques in photosynthesis, advances in photosynthesis and respiration, vol 3 (series editor: Govindjee). Kluwer Academic Publishers (now Springer), Dordrecht, pp 93-107
23. J Kern G Renger 2007 Photosystem II: structure and mechanism of water:plastoquinone oxidoreductase Photosynth Res 94 183 202 10.1007/s11120-007-9201-1
24. Keranen M, Pulo P, E-M Aro, Govindjee, Tyystjärvi E (1998) Thermoluminescence B and Q bands are the same temperature in an autotrophic and a heterotrophic D1 protein mutant of Synechocystis sp. PCC 6803. In: Garab G (ed) Photosynthesis mechanisms and effects. Kluwer Academic Publishers (now Springer), Dordrecht, pp 1145-1148
25. 2 evolution-I. A linear four step mechanism Photochem Photobiol 11 457 475 10.1111/j.1751-1097.1970.tb06017.x
26. DM Kramer AR Crofts 1990 A portable multi-flash fluorimeter for measurement of donor and acceptor reactions of Photosystem 2 in leaves of intact plants under field conditions Photosynth Res 26 181 193 10.1007/BF00033131
27. Kramer D, Adawi O, Morse PII, Crofts AR (1987) A portable double-flash spectrophotometer for measuring the kinetics of electron transport components in intact leaves. In: Biggins J (ed) Progress in photosynthesis research, vol 2. Martinus Nijhoff Publishers, Dordrecht, pp 665-668
28. DM Kramer RA Roffey RT Sayre Govindjee 1994 The A(T) thermoluminescence band from Chlamydomonas reinhardtii and the effects of mutagenesis of histidine-residues on the donor side of the Photosystem II D1 polypeptide Biochim Biophys Acta 1185 228 237 10.1016/0005-2728(94)90214-3
29. J Lavergne 1982 Interaction of exogenous benzoquinone with Photosystem II in chloroplasts: the semiquinone form acts as a dichlorophenyldimethylurea- insensitive secondary acceptor Biochim Biophys Acta 679 12 18 10.1016/0005-2728(82)90249-3
30. J Lavergne 1984 Absorption changes of Photosystem II donors and acceptors in algal cells FEBS Lett 173 9 14 10.1016/0014-5793(84)81006-6
31. Lavergne J, Briantais JM (1996) Photosystem II heterogeneity. In: Ort DR, Yocum C (eds) Oxygenic photosynthesis: the light reactions. Advances in photosynthesis and respiration (series editor: Govindjee), vol 4. Kluwer Academic Publishers (now Springer), Dordrecht, pp 265-287
32. J Lavergne E Leci 1993 Properties of inactive Photosystem II centers Photosynth Res 35 323 343 10.1007/BF00016563
33. J Lavorel 1968 Sur une relation entre fluorescence et luminescence dans les systemes photosynthetique Biochim Biophys Acta 153 727 730 10.1016/0005-2728(68)90203-X
34. B Loll J Kern W Saenger A Zouni J Biesadka 2005 Towards complete cofactor arrangement in the 3 0 Å resolution structure of Photosystem II Nature 438 1040 1044 10.1038/nature04224
35. - states in Photosystem II Plant Physiol 107 187 197
36. J Minagawa AR Crofts 1994 A robust protocol for site-directed mutagenesis of the D1 protein of Chlamydomonas reinhardtii: a PCR-spliced psbA gene in a plasmid conferring spectinomycin resistance was introduced into a psbA deletion strain Photosynth Res 42 121 131 10.1007/BF02187123
37. CC Moser CC Page X Chen PL Dutton 1997 Biological electron tunneling through native protein media J Biol Inorg Chem 2 393 398 10.1007/s007750050149
38. CC Moser CC Page PL Dutton 2006 Darwin at the molecular scale: selection and variance in electron tunneling proteins including cytochrome c oxidase Philos Trans R Soc 361 1295 1305 10.1098/rstb.2006.1868
39. P Mulo T Tyystjärvi E Tyystjärvi Govindjee P Mäenpää E-M Aro 1997 Mutagenesis of the D-E Loop of Photosystem II reaction centre protein D1: function and assembly of Photosystem II Plant Mol Biol 33 1059 1071 10.1023/A:1005765305956
40. Papageorgiou G, Govindjee (eds) (2004) Chlorophyll a fluorescence: a signature of photosynthesis. Advances in photosynthesis and respiration (series editor: Govindjee), vol 19. Springer, Dordrecht
41. Petrouleas V, Crofts AR (2005) The iron-quinone acceptor complex. In: Wydrzynski T, Satoh K (eds) Photosystem II: the light-driven water:plastoquinone oxidoreductase. Advances in photosynthesis and respiration (series editor: Govindjee), vol 22. Springer, Dordrecht, pp 177-206
42. RJ Porra WA Thompson PE Kriedemann 1989 Determination of accurate extinction coefficients and simultaneous-equations for assaying chlorophyll-a and chlorophyll-b extracted with 4 different solvents-verification of the concentration of chlorophyll standards by atomic-absorption spectroscopy Biochim Biophys Acta 975 384 394 10.1016/S0005-2728(89)80347-0
43. JT Randall MHF Wilkins 1945 Phosphorescence and electron traps I. The study of trap distributions Proc R Soc A 184 365 389 10.1098/rspa.1945.0024
44. F Rappaport M Guergova-Kuras PJ Nixon BA Diner J Lavergne 2002 Kinetics and pathways of charge recombination in Photosystem II Biochemistry 41 8518 8527 10.1021/bi025725p
45. F Rappaport A Cuni L Xiong R Sayre RM Lavergne 2005 Charge recombination and thermoluminescence in Photosystem II Biophys J 88 1948 1958 10.1529/biophysj.104.050237
46. HH Robinson AR Crofts 1983 Kinetics of the oxidation reduction reactions of the Photosystem II quinone acceptor complex, and the pathway for deactivation FEBS Lett 153 221 226 10.1016/0014-5793(83)80152-5
47. SV Ruffle D Donnelly TL Blundell JHA Nugent 1992 A 3-dimensional model of the Photosystem II reaction center of Pisum sativum Photosynth Res 34 287 300 10.1007/BF00033446
48. AW Rutherford AR Crofts Y Inoue 1982 Thermoluminescence as a probe of Photosystem II photochemistry-the origin of the flash-induced glow peaks Biochim Biophys Acta 682 457 465 10.1016/0005-2728(82)90061-5
49. W Rutherford Govindjee Y Inoue 1984 Charge accumulation and photochemistry in leaves studied by thermoluminescence and delayed light emission Proc Natl Acad Sci USA 81 1107 1111 10.1073/pnas.81.4.1107
50. Sane PV, Rutherford AW (1986) Thermoluminescence from photosynthetic membranes. In: Govindjee, Amesz J, Fork DC (eds) Light emission by plants and bacteria. Academic, Orlando, pp 329-360
51. G Sarkar SS Sommer 1990 The megaprimer method of site-directed mutagenesis Biotechniques 8 404 407
52. VP Shinkarev CA Wraight 1993 Oxygen evolution in photosynthesis-from unicycle to bicycle Proc Natl Acad Sci USA 90 1834 1838 10.1073/pnas.90.5.1834
53. N Sueoka 1960 Mitotic replication of deoxyribonucleic acid in Chlamydomonas reinhardtii Proc Natl Acad Sci USA 46 83 91 10.1073/pnas.46.1.83
54. Taoka S (1989) Kinetics of electron transfer and binding of inhibitors in the two electron gate of chloroplasts. Ph.D. thesis, University of Illinois, Urbana-Champaign
55. Taoka S, Crofts AR (1987) Competition of Inhibitors with the secondary quinone in dark-adapted thylakoid membranes. In: Biggins J (ed) Progress in photosynthesis research, vol 2. Martinus Nijhoff Publishers, Dordrecht, pp 425-428
56. Taoka S, Robinson HH, Crofts AR (1983) Kinetics of the reactions of the two-electron gate of photosystem: studies of the competition between plastoquinone and inhibitors. In: Inoue Y, Crofts AR, Govindjee, Murata N, Renger G, Satoh K (eds) The oxygen evolving system of photosynthesis. Academic, Tokyo, pp 369-382
57. Van Rensen JJS (2005) Role of bicarbonate at the acceptor side of Photosystem II. In: Govindjee, Beatty JH, Gest H, Allen JF (eds) Discoveries in photosynthesis. Advances in photosynthesis and respiration (series editor: Govindjee), vol 20. Springer, Dordrecht, pp 303-310
58. JJS Van Rensen C Xu Govindjee 1999 Role of bicarbonate in the Photosystem II, the water-plastoquinone oxido-reductase of plant photosynthesis Physiol Plant 105 585 592 10.1034/j.1399-3054.1999.105326.x
59. I Vass 2003 The history of photosynthetic thermoluminescence Photosynth Res 76 303 318 10.1023/A:1024989519054
60. I Vass Govindjee 1996 Thermoluminescence from the photosynthetic apparatus Photosynth Res 48 117 126 10.1007/BF00041002
61. Vassiliev S, Bruce D (2008) Toward understanding molecular mechanisms of light harvesting and charge separation in Photosystem II. Photosynth Res: 15 pp. doi: 10.007/s11120-008-9203-4
62. BR Velthuys 1981 Electron-dependent competition between plastoquinone and inhibitors for binding to Photosystem II FEBS Lett 126 277 281 10.1016/0014-5793(81)80260-8
63. BR Velthuys J Amesz 1974 Charges accumulation at the reducing side of system 2 of photosynthesis Biochim Biophys Acta 333 85 94 10.1016/0005-2728(74) 90165-0
64. C Vernotte J-M Briantais C Astier Govindjee 1995 Differential effects of formate in single and double mutants of D1 in Synechocystis species PCC 6714 Biochim Biophys Acta 1229 296 301 10.1016/0005-2728(95)00018-E
65. F-A Wollman 1978 Determination and modification of the redox state of the secondary acceptor of Photosystem II in the dark Biochim Biophys Acta 503 263 273 10.1016/0005-2728(78)90187-1
66. CA Wraight 1981 Oxidation-reduction physical chemistry of the acceptor quinone complex in bacterial photosynthetic reaction centers: evidence for a new model of herbicide activity Isr J Chem 21 348 354
67. Wydrzynski TJ, Satoh K (eds) (2005) Photosystem II: the light-driven water:plastoquinone oxidoreductase. Advances in photosynthesis and respiration (series editor: Govindjee), vol 22. Springer, Dordrecht
68. J Xiong S Subramaniam Govindjee 1996 Modeling of the D1/D2 proteins and cofactors of the Photosystem II reaction center: implications for herbicide and bicarbonate binding Protein Sci 5 2054 2073
69. J Xiong J Minagawa A Crofts Govindjee 1998 Loss of inhibition by formate in newly constructed Photosystem II D1 mutants, D1-R257E and D1-R257M, of Chlamydomonas reinhardtii Biochim Biophys Acta 1365 473 491 10.1016/S0005- 2728(98)00101-7
70. J Xiong S Subramaniam Govindjee 1998 A knowledge-based three dimensional model of the Photosystem II reaction center of Chlamydomonas reinhardtii Photosynth Res 56 229 254 10.1023/A:1006061918025