Molecular characterization of a novel soybean gene encoding a neutral PR-5 protein induced by high-salt stress

Plant Physiology and Biochemistry

Volumn 47, Issue 1, 2009, Pages 73-79

  Tachi, Hiroyuki ^a   Fukuda Yamada, Kumiko ^a   Kojima, Toshio ^a   Shiraiwa, Masakazu ^a   Takahara, Hidenari ^a  

^a Ibaraki University   (Japan)

Author keywords

Glycine max; High salt stress; Homology modeling; Methyl jasmonate; Pathogenesis related protein; Salicylic acid; Thaumatin like protein

Indexed keywords

ACETIC ACID DERIVATIVE; CYCLOPENTANE DERIVATIVE; ISOPROTEIN; JASMONIC ACID METHYL ESTER; OXYLIPIN; PHYTOHORMONE; SALICYLIC ACID; SOYBEAN PROTEIN; VEGETABLE PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; CLASSIFICATION; DRUG EFFECT; GENE EXPRESSION; GENE EXPRESSION REGULATION; GENETICS; ISOLATION AND PURIFICATION; METABOLISM; MOLECULAR GENETICS; PHYLOGENY; PROTEIN CONFORMATION; SALT TOLERANCE; SEQUENCE ANALYSIS; SOYBEAN;

ACETIC ACIDS; AMINO ACID SEQUENCE; CYCLOPENTANES; GENE EXPRESSION; GENE EXPRESSION REGULATION, PLANT; MOLECULAR SEQUENCE DATA; OXYLIPINS; PHYLOGENY; PLANT GROWTH REGULATORS; PLANT PROTEINS; PROTEIN CONFORMATION; PROTEIN ISOFORMS; SALICYLIC ACID; SALT-TOLERANCE; SEQUENCE ANALYSIS, PROTEIN; SOYBEAN PROTEINS; SOYBEANS;

CICER ARIETINUM; GLYCINE MAX;

EID: 57649103090     PISSN: 09819428     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plaphy.2008.09.012     Document Type: Article

References (36)

1. Abad L.R., D'Urzo M.P., Liu D., Narashimhan M.L., Reuveni M., Zhu J.K., Niu X., Singh N.K., Hasegawa P.M., and Bressan R.A. Antifungal activity of tobacco osmotin has specificity and involves plasma membrane permeabilization. Plant Sci. 118 (1996) 11-23
2. Aoki A., Kanegami A., Mihara M., Kojima T., Shiraiwa M., and Takahara H. Molecular cloning and characterization of a novel soybean gene encoding a leucine-zipper-like protein induced to salt stress. Gene 356 (2005) 135-145
3. Altschul S.F., Maddan T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W., and Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25 (1997) 3389-3402
4. Batalia M.A., Monzingo A.F., Ernst S., Roberts W., and Robertus J.D. The crystal structure of the antifungal protein zeamatin, a member of the thaumatin-like, PR-5 protein family. Nat. Struct. Biol. 3 (1996) 19-23
5. Chun J.U., and Griffith M. Variation of the antifreeze proteins during cold acclimation among winter cereals and their relationship with freezing resistance. Korean J. Crop Sci. 43 (1998) 172-178
6. Datta K., Velazhahan R., Oliva N., Ona I., Mew T., Khush G.S., Muthukrishnan S., and Datta S.K. Over-expression of the cloned rice thaumatin-like protein (PR-5) gene in transgenic rice plants enhances environmental friendly resistance to Rhizoctonia solani causing sheath blight disease. Theor. Appl. Genet. 98 (1999) 1138-1145
7. Graham J.S., Burkhart W., Xiong J., and Gillikin J.W. Complete amino acid sequence of soybean leaf P21. Plant. Physiol. 98 (1992) 163-165
8. Hansele T., Ichinose Y., and Bart W. Biochemical and molecular biological studies on infection (Ascochyta rabiei)-induced thaumatin-like proteins from chickpea plants (Cicer arietinum L.). Z. Naturforsch. 56C (2001) 1095-1107
9. Isobe S., Klimenko I., Ivashuta S., Gau M., and Kozlov N.N. First RFLP linkage map of red clover (Trifolium pratense L.) based on cDNA probes and its transferability to other red clover germplasm. Theor. Appl. Genet. 108 (2003) 105-112
10. King G.J., Turner V.A., Hussey Jr. C.E., Wurtele E.S., and Lee S.M. Isolation and characterization of a tomato cDNA clone which codes for a salt-induced protein. Plant. Mol. Biol. 10 (1998) 401-412
11. Koiwa H., Kato H., Nakatsu T., Oda J., Yamada Y., and Sato F. Crystal structure of tobacco PR-5d protein at 1.8 A resolution reveals a conserved acidic cleft structure in antifungal thaumatin-like proteins. J. Mol. Biol. 286 (1999) 1137-1145
12. Koiwa H., Sato F., and Yamada Y. Characterization of accumulation of tobacco PR-5 proteins by IEF-immunoblot analysis. Plant. Cell Physiol. 35 (1994) 821-827
13. Kononowics A.K., Nelson D.E., Singh N.K., Hasegawa P.M., and Bressan R.A. Regulation of the osmotin gene promoter. Plant Cell 4 (1992) 513-524
14. Leone P., Menu-Bouaouiche L., Peumans W.J., Payan F., Barre A., Roussel A., van Damme E.J.M., and Rouge P. Resolution of the structure of the allergenic and antifungal banana fruit thaumatin-like protein at 1.7-A. Biochimica 88 (2006) 45-52
15. Liu D., Raghothama K.G., Hasegawa P.M., and Bressan R.A. Osmotin overexpression in potato delays development of disease symptoms. Proc. Natl. Acad. Sci. U.S.A. 91 (1994) 1888-1892
16. Melcher L.S., Sela-Buurlage M.B., Vloemans S.A., Woloshuk C.P., van Roekel J.S., Pen J., van den Elzen P.J., and Cornelissen B.J. Extracellular targeting of the vacuolar tobacco proteins AP24, chitinase and β-1,3-glucanase in transgenic plants. Plant Mol. Biol. 21 (1993) 583-593
17. Min K., Ha S.C., Hasegawa P.M., Bressan R.A., Yun D.-J., and Kim K.K. Crystal structure of osmotin, a plant antifungal protein, Proteins Struct. Funct. Genet. 54 (2004) 170-173
18. Neuhaus J.M., Sticher L., Meins F., and Boller T. A short C-terminal sequence is necessary and sufficient for the targeting of chitinases to plant vacuole. Proc. Natl. Acad. Sci. U.S.A. 88 (1991) 10362-10366
19. Niki T., Mitsuhara I., Seo S., Ohtsubo N., and Ohashi Y. Antagonistic effect of salicylic acid and jasmonic acid on the expression of pathogenesis-related (PR) protein genes in wounded mature tobacco leaves. Plant Cell Physiol. 39 (1998) 500-507
20. Ogata C.M., Gordon P.F., de Vos A.M., and Kim S.H. Crystal structure of a sweet tasting protein thaumatin I, at 1.65 A resolution. J. Mol. Biol. 228 (1992) 893-908
21. Onishi M., Tachi H., Kojima T., Shiraiwa M., and Takahara H. Molecular cloning and characterization of a novel salt-inducible gene encoding an acidic isoform of PR-5 protein in soybean. Plant Physiol. Biochem. 44 (2006) 574-580
22. Page P.D.M. TREEVIEW: an application to display phylogenetic trees on personal computers. Comput. Appl. Biosci. 12 (1996) 357-358
23. Park C.J., An J.M., Shin Y.C., Kim K.J., Lee B.J., and Peak K.H. Molecular characterization of pepper germin-like protein as the novel PR-16 family of pathogenesis-related proteins isolated during resistance response to viral and bacterial infection. Planta 219 (2004) 797-806
24. Roberts W.K., and Selitrennikoff C.P. Zeamatin, an antifungal protein from maize with membrane-permeabilizing activity. J. Gen. Microbiol. 136 (1990) 1771-1778
25. Salzman R.A., Koiwa H., Ibeas J.I., Pardo J.M., Hasegawa P.M., and Bressan R.A. Inorganic cations mediate plant PR-5 protein antifungal activity through fungal Mnn1-nad Mnn4-regulated cell surface glycans. Mol. Plant Microbe Interact. 17 (2004) 780-788
26. Sato F., Koiwa H., Sakai Y., Kato N., and Yamada Y. Synthesis and secretion of tobacco neutral PR-5 protein by transgenic tobacco and yeast. Biochem. Biophys. Res. Commun. 211 (1995) 909-913
27. Singh N.K., Bracker C.A., Hasegawa P.M., Handa A.K., Buckel S., Hermodson M.A., Pfankock E., Regnier F.E., and Bressan R.A. Characterization of osmotin. Plant Physiol. 85 (1987) 529-536
28. Schwede T., Kopp J., Guex N., and Peitsch M.C. SWISS-MODEL: an automated protein homology-modeling server. Nucleic Acids Res. 31 (2003) 3381-3385
29. Stintzi A., Heitz T., Prasad V., Wiedemann-Merdinoglu S., Kauffmann S., Geoffroy P., Legrand M., and Fritiq B. Plant 'pathogenesis-related' proteins and their role in defense against pathogens. Biochimie 75 (1993) 687-706
30. Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTALW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22 (1994) 4673-4680
31. Van Loon L.C., Pierpoint W.S., Boller T., and Conejero V. Recommendations for naming plant pathogenesis-related proteins. Plant Mol. Biol. Rep. 12 (1994) 245-264
32. Van Loon L.C., and van Strien E.A. The families of pathogenesis-related proteins, their activities, and comparative analysis of PR-1 type proteins. Physiol. Mol. Plant Pathol. 55 (1999) 85-97
33. Velazhahan R., Datta S.K., and Muthukrishnan S. The PR-5 family, thaumatin-like proteins. In: Datta S.K., and Muthukrishnan S. (Eds). Pathogenesis-Related Proteins in Plants (1999), CRC press, Washington DC 107-129
34. Vigers A.J., Roberts W.K., and Selitrennikoff C.P. A new family of plant antifungal proteins. Mol. Plant-Microbe Interact. 4 (1991) 315-323
35. Woloshuk C.P., Meulenhoff J.S., Sela-Buurlage M., van den Elzen P.J.M., and Cornelissen B.J.C. Pathogen-induced proteins with inhibitory activity towards Phytophtora infestans. Plant Cell 3 (1991) 619-628
36. Xu Y., Chang P.F.L., Liu D., Narasimhan M.L., Raghothama K.G., Hasegawa P.M., and Bressan R.A. Plant defense genes are synergistically induced by ethylene and methyl jasmonate. Plant Cell 6 (1994) 1077-1085