A 281 Tflops calculation for X-ray protein structure analysis with special-purpose computers MDGRAPE-3

Proceedings of the 2007 ACM/IEEE Conference on Supercomputing, SC'07

Volumn , Issue , 2007, Pages

  Ohno, Yousuke ^a   Nishibori, Eiji ^b   Narumi, Tetsu ^c   Koishi, Takahiro ^d   Tahirov, Tahir H ^e   Ago, Hideo ^e   Miyano, Masashi ^e   Himeno, Ryutaro ^f   Ebisuzaki, Toshikazu ^f   Sakata, Makoto ^b   Taiji, Makoto ^a  

^a RIKEN YOKOHAMA INSTITUTE   (Japan)

^b NAGOYA UNIVERSITY   (Japan)

^c KEIO UNIVERSITY   (Japan)

^d UNIVERSITY OF FUKUI   (Japan)

^e RIKEN SPring 8 Center   (Japan)

^f RIKEN   (Japan)

Author keywords

Genetic algorithm; Special purpose computer; X ray structure determination

Indexed keywords

COMPUTERS; DATA STRUCTURES; DIELECTRIC RELAXATION; DIFFRACTION; DIFFRACTION GRATINGS; DIFFRACTION PATTERNS; DISCRETE FOURIER TRANSFORMS; FOURIER ANALYSIS; FOURIER TRANSFORMS; GENETIC ALGORITHMS; HOLOGRAPHIC INTERFEROMETRY; INTERFEROMETRY; MODAL ANALYSIS; MODEL STRUCTURES; PROBABILITY DENSITY FUNCTION; PROTEINS; RELIABILITY; SULFUR COMPOUNDS; THREE DIMENSIONAL;

BIOLOGICAL MOLECULES; CALCULATION SPEEDS; COMPUTATION TIMES; DFT CALCULATIONS; DIFFRACTION DATUMS; DS METHODS; EXPERIMENTAL DATUMS; FOURIER; HIGH-PERFORMANCE COMPUTING; MODEL PARAMETERS; MOLECULAR SIMULATIONS; PEAK PERFORMANCES; PROTEIN STRUCTURE ANALYSES; RELIABILITY FACTORS; SPECIAL-PURPOSE COMPUTER; STATISTICAL DIFFERENCES; STRUCTURE DETERMINATIONS; SYNTHETASE; TYPICAL VALUES; X-RAY STRUCTURE DETERMINATION;

STRUCTURAL OPTIMIZATION;

EID: 56749182366     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1145/1362622.1362698     Document Type: Conference Paper

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