Molecular characterization of lysine 6-dehydrogenase from Achromobacter denitrificans

Journal of Biochemistry and Molecular Biology

Volumn 41, Issue 11, 2008, Pages 790-795

  Ruldeekulthamrong, Prakarn ^a   Maeda, Sayaka ^b   Kato, Shin Ichiro ^b   Shinji, Nagata ^b   Sittipraneed, Siriporn ^a   Packdibamrung, Kanoktip ^a   Misono, Haruo ^b  

^a CHULALONGKORN UNIVERSITY   (Thailand)

^b KOCHI UNIVERSITY   (Japan)

Author keywords

Achromobacter denitrificans; Delta 1 piperideine 6 carboxylate; DQ165182; Lysine 6 dehydrogenase

Indexed keywords

ACHROMOBACTER DENITRIFICANS; ESCHERICHIA COLI;

EID: 56649109910     PISSN: 12258687     EISSN: 02191024     Source Type: Journal    
DOI: 10.5483/bmbrep.2008.41.11.790     Document Type: Article

References (24)

1. Ohshima, T. and Soda, K. (2000) Stereoselective biocatalysis: amino acid dehydrogenases, their applications; in Stereoselective Biocatalysis, Patel RN (eds.), pp. 877-902, Marcel Dekker Inc, New York, U.S.A.
2. Burgi, W., Richterich, R. and Colombo, J. P. (1966) L-Lysine dehydrogenase deficiency in a patient with congenital lysine intolerance. Nature 211, 854-856.
3. Misono, H. and Nagasaki, S. (1982) Occurrence of L-lysine ε-dehydrogenase in Agrobacterium tumefaciens. J. Bacteriol. 150, 398-401.
4. Misono, H. and Nagasaki, S. (1983) Distribution and physiological function of L-lysine ε-dehydrogenase. Agric. Biol. Chem. 47, 631-633.
5. Hammer, T., Bode, R. and Birnbaum, D. (1991) Occurrence of a novel yeast enzyme, L-lysine ε-dehydrogenase, which catalyzes the first step of lysine catabolism in Candida albicans. J. Gen. Microbiol. 137, 711-715.
6. Misono, H., Uehigashi, H., Morimoto, E. and Nagasaki, S. (1985) Purification and properties of L-lysine ε-dehydrogenase from Agrobacterium tumefaciens. Agric. Biol. Chem. 49, 2253-2255.
7. Misono, H., Hashimoto, H., Uehigashi, H., Nagata, S. and Nagasaki, S. (1989) Properties of L-lysine ε-dehydrogenase from Agrobacterium tumefaciens. J. Biochem. 105, 1002-1008.
8. Misono, H., Yoshimura, T., Nagasaki, S. and Soda, K. (1990) Stereospecific abstraction of ε-pro-R-hydrogen of L-lysine by L-lysine ε-dehydrogenase from Agrobacterium tumefaciens. J. Biochem. 107, 169-172.
9. Hashimoto, H., Misono, H., Nagata, S. and Nagasaki, S. (1989) Activation of L-lysine ε-dehydrogenase from Agrobacterium tumefaciens by several amino acids and monocarboxylates. J. Biochem. 106, 76-80.
10. Hashimoto, H., Misono, H., Nagata, S. and Nagasaki, S. (1989) Stereospecificity of hydrogen transfer of the coenzyme catalyzed by L-lysine ε-dehydrogenase. Agric. Biol. Chem. 53, 1175-1176.
11. Hashimoto, H., Misono, H., Nagata, S. and Nagasaki, S. (1990) Selective determination of L-lysine with L-lysine ε-dehydrogenase. Agric. Biol. Chem. 54, 291-294.
12. Dempsey, E., Wang, J., Wollenberger, U. and Ozsoz, M. (1992) A lysine dehydrogenase-based electrode for biosensing of L-lysine. Biosens. Bioelectron. 7, 323-327.
13. 1-Piperideine-6-carboxylate dehydrogenase, a new enzyme that forms α-aminoadipate in Streptomyces clavuligerus and other cephamycin C-producing actinomycetes. Biochem. J. 327, 59-64.
14. Heydari, M., Ohshima, T., Nunoura-Kominato, N. and Sakuraba, H. (2004) Highly stable L-lysine 6-dehydrogenase from the thermophile Geobacillus stearothermophilus isolated from a Japanese hot spring: characterization, gene cloning and sequencing, and expression. Appl. Environ. Microbiol. 70, 937-942.
15. 1-piperideine-6-carboxylic acid. Biochemistry 7, 4102-4109.
16. Kusakabe, H., Kodama, K., Kuninaka, A., Yoshino, H., Misono, H. and Soda, K. (1980) A new antitumor enzyme, L-lysine α-oxidase from Trichoderma viride. Purification and enzymological properties. J. Biol. Chem. 255, 976-981.
17. Wierenga, R. K., Terpsta, P. and Hol, W. G. (1986) Prediction of the occurrence of the ADP-binding β-α-β fold in proteins, using an amino acid sequence fingerprint. J. Mol. Biol. 187, 101-107.
18. Fujii, T., Mukaihara, M., Agematu, H. and Tsunekawa, H. (2002) Biotransformation of L-lysine to L-pipecolic acid catalyzed by L-lysine 6-aminotransferase and pyrroline-5-carboxylate reductase. Biosci. Biotechnol. Biochem. 66, 622-627.
19. Muramatsu, H., Mihara, H., Yasuda, M., Ueda, M., Kurihara, T., Esaki, N. (2006) Enzymatic synthesis of L-pipecolic acid by delta-1-piperideine-2- carboxylate reductase from Pseudomonas putida. Biosci. Biotech. Biochem. 70, 2296-2298.
20. Paiva, N. L., Demain, A. L. and Roberts, M.F. (1993) The immediate precursor of the nitrogen-containing ring of rapamycin is free pipecolic acid. Enzyme. Microb. Technol. 15, 581-585.
21. Boger, D. L., Chen, J. H. and Saionz, K. W. (1996) (-)-Sandramycin: total synthesis and characterization of DNA binding properties. J. Am. Chem. Soc. 37, 1629-1644.
22. Smith, U. I. and Opie, J. W. (1955) Preparation of o-aminobenzaldehyde; in Organic Syntheses, Horning, E. C. (eds.), pp.56-58, Vol. 3, Wiley, New York, USA.
23. Lowry, O. H., Rosebrough, N. J., Farr, A.L. and Randall, R. J. (1951) Protein measurement with the Folin phenol reagent. J. Biol. Chem. 193, 265-275.
24. Laemmli, U. K. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227, 680-685.