-
2
-
-
0141515750
-
Prediction of protein subcellular locations by support vector machines using compositions of amino acids and amino acid pairs
-
Park, K.J., Kanehisa, M.: Prediction of protein subcellular locations by support vector machines using compositions of amino acids and amino acid pairs. Bioinformatics 19(13), 1656-1663 (2003)
-
(2003)
Bioinformatics
, vol.19
, Issue.13
, pp. 1656-1663
-
-
Park, K.J.1
Kanehisa, M.2
-
3
-
-
27744493876
-
TARGET: A new method for predicting protein subcellular localization in eukaryotes
-
Guda, C., Subramaniam, S.: TARGET: a new method for predicting protein subcellular localization in eukaryotes. Bioinformatics 21(21), 3963-3969 (2005)
-
(2005)
Bioinformatics
, vol.21
, Issue.21
, pp. 3963-3969
-
-
Guda, C.1
Subramaniam, S.2
-
4
-
-
1942505330
-
Predicting subcellular localization of proteins for gram-negative bacteria by support vector machines based on n-peptide compositions
-
Yu, C.-S., Lin, C.-J., Hwang, J.-K.: Predicting subcellular localization of proteins for gram-negative bacteria by support vector machines based on n-peptide compositions. Protein Science 13, 1402-1406 (2004)
-
(2004)
Protein Science
, vol.13
, pp. 1402-1406
-
-
Yu, C.-S.1
Lin, C.-J.2
Hwang, J.-K.3
-
5
-
-
15844431346
-
PSORTb v.2.0: Expanded prediction of bacterial protein subcellular localization and insights gained from comparative proteome analysis
-
Gardy, J.L., Laird, M.R., Chen, F., Rey, S., Walsh, C.J., Ester, M., Brinkman, F.S.L.: PSORTb v.2.0: expanded prediction of bacterial protein subcellular localization and insights gained from comparative proteome analysis. Bioinfomatics 21, 617-623 (2004)
-
(2004)
Bioinfomatics
, vol.21
, pp. 617-623
-
-
Gardy, J.L.1
Laird, M.R.2
Chen, F.3
Rey, S.4
Walsh, C.J.5
Ester, M.6
Brinkman, F.S.L.7
-
6
-
-
85142162460
-
-
Bioinfomatics
-
Höglund, A., Dönnes, P., Blum, T., Adolph, H.-W., Kohlbacher, O.: MultiLoc: prediction of protein subcellular localization using N-terminal targeting sequences, sequence motifs, and amino acid composition. Bioinfomatics (2006)
-
(2006)
MultiLoc: Prediction of protein subcellular localization using N-terminal targeting sequences, sequence motifs, and amino acid composition
-
-
Höglund, A.1
Dönnes, P.2
Blum, T.3
Adolph, H.-W.4
Kohlbacher, O.5
-
7
-
-
23144461988
-
LOCSVMPSI: A web server for subcellular localization of eukaryotic proteins using SVM and profile of PSI-BLAST
-
Xie, D., Li, A., Wang, M., Fan, Z., Feng, H.: LOCSVMPSI: a web server for subcellular localization of eukaryotic proteins using SVM and profile of PSI-BLAST. Nucleic Acids Research 33, W105-W110 (2005)
-
(2005)
Nucleic Acids Research
, vol.33
-
-
Xie, D.1
Li, A.2
Wang, M.3
Fan, Z.4
Feng, H.5
-
8
-
-
17644389617
-
Support vector machine-based method for subcellular localization of human proteins using amino acid composition, their order, and similarity search
-
Garg, A., Bhasin, M., Raghava, G.P.S.: Support vector machine-based method for subcellular localization of human proteins using amino acid composition, their order, and similarity search. The Journal of Biological Chemistry 280(15), 14427-14432 (2005)
-
(2005)
The Journal of Biological Chemistry
, vol.280
, Issue.15
, pp. 14427-14432
-
-
Garg, A.1
Bhasin, M.2
Raghava, G.P.S.3
-
11
-
-
0032077533
-
Using neural networks for prediction of the subcellular location of proteins
-
Reinhardt, A., Hubbard, T.: Using neural networks for prediction of the subcellular location of proteins. Nucleic Acids Research 26, 2230-2236 (1998)
-
(1998)
Nucleic Acids Research
, vol.26
, pp. 2230-2236
-
-
Reinhardt, A.1
Hubbard, T.2
-
12
-
-
2942513121
-
Esub8: A novel tool to predict protein subcellular localizations in eukaryotic organisms
-
Cui, Q., Jiang, T., Liu, B., Ma, S.: Esub8: A novel tool to predict protein subcellular localizations in eukaryotic organisms. BMC Bioinformatics 5(66) (2004)
-
(2004)
BMC Bioinformatics
, vol.5
, Issue.66
-
-
Cui, Q.1
Jiang, T.2
Liu, B.3
Ma, S.4
-
13
-
-
84862630897
-
Hilbertian metrics and positive definite kernels on probability measures
-
Cowell, R, Ghahramani, Z, eds
-
Hein, M., Bousquet, O.: Hilbertian metrics and positive definite kernels on probability measures. In: Cowell, R., Ghahramani, Z. (eds.) Proceedings of AISTATS 2005, pp. 136-143 (2005)
-
(2005)
Proceedings of AISTATS
, pp. 136-143
-
-
Hein, M.1
Bousquet, O.2
-
14
-
-
8844263749
-
A statistical framework for genomic data fusion
-
Lanckriet, G., De Bie, T., Cristianini, N., Jordan, M.I., Stafford Noble, W.: A statistical framework for genomic data fusion. Bioinfomatics 20(16), 2626-2635 (2004)
-
(2004)
Bioinfomatics
, vol.20
, Issue.16
, pp. 2626-2635
-
-
Lanckriet, G.1
De Bie, T.2
Cristianini, N.3
Jordan, M.I.4
Stafford Noble, W.5
-
16
-
-
0027657329
-
Semi-Infinite Programming: Theory, Methods, and Applications
-
Hettich, R., Kortanek, K.O.: Semi-Infinite Programming: Theory, Methods, and Applications. SIAM Review 35(3), 380-429 (1993)
-
(1993)
SIAM Review
, vol.35
, Issue.3
, pp. 380-429
-
-
Hettich, R.1
Kortanek, K.O.2
-
17
-
-
33747496466
-
Structured multicategory support vector machines with analysis of variance decomposition
-
Lee, Y., Kim, Y., Lee, S., Koo, J.-Y: Structured multicategory support vector machines with analysis of variance decomposition. Biometrika 93(3), 555-571 (2006)
-
(2006)
Biometrika
, vol.93
, Issue.3
, pp. 555-571
-
-
Lee, Y.1
Kim, Y.2
Lee, S.3
Koo, J.-Y.4
-
18
-
-
45149115870
-
Improved functional prediction of proteins by learning kernel combinations in multilabel settings
-
Roth, V., Fischer, B.: Improved functional prediction of proteins by learning kernel combinations in multilabel settings. BMC Bioinformatics 8 (suppl. 2), 12 (2007)
-
(2007)
BMC Bioinformatics
, vol.8
, Issue.SUPPL. 2
, pp. 12
-
-
Roth, V.1
Fischer, B.2
-
19
-
-
0036891705
-
Sequence conserved for subcellular localization
-
Nair, R., Rost, B.: Sequence conserved for subcellular localization. Protein Science 11, 2836-2847 (2002)
-
(2002)
Protein Science
, vol.11
, pp. 2836-2847
-
-
Nair, R.1
Rost, B.2
-
20
-
-
33746218840
-
Prediction of protein subcellular localization
-
Yu, C.-S., Chen, Y.-C., Lu, C.-H., Hwang, J.-K.: Prediction of protein subcellular localization. Proteins: Structure, Function and Bioinformatics 64(3), 643-651 (2006)
-
(2006)
Proteins: Structure, Function and Bioinformatics
, vol.64
, Issue.3
, pp. 643-651
-
-
Yu, C.-S.1
Chen, Y.-C.2
Lu, C.-H.3
Hwang, J.-K.4
-
21
-
-
0033551248
-
Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles
-
Pellegrini, M., Marcotte, E.M., Thompson, M.J., Eisenberg, D., Yeates, T.O.: Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles. Proceedings of the National Academy of Sciences 96(8), 4285-4288 (1999)
-
(1999)
Proceedings of the National Academy of Sciences
, vol.96
, Issue.8
, pp. 4285-4288
-
-
Pellegrini, M.1
Marcotte, E.M.2
Thompson, M.J.3
Eisenberg, D.4
Yeates, T.O.5
-
22
-
-
0034697980
-
Predicting subcellular localization of proteins based on their N-terminal amino acid sequence
-
Emanuelsson, O., Nielsen, H., Brunak, S., von Heijne, G.: Predicting subcellular localization of proteins based on their N-terminal amino acid sequence. Journal of Molecular Biology 300, 1005-1016(2000)
-
(2000)
Journal of Molecular Biology
, vol.300
, pp. 1005-1016
-
-
Emanuelsson, O.1
Nielsen, H.2
Brunak, S.3
von Heijne, G.4
-
23
-
-
0034710981
-
Localizing proteins in the cell from their phylogenetic profiles
-
Marcotte, E.M., Xenarios, I., van der Bliek, A.M., Eisenberg, D.: Localizing proteins in the cell from their phylogenetic profiles. Proceedings of the National Academy of Sciences 97(22), 12115-12120 (2000)
-
(2000)
Proceedings of the National Academy of Sciences
, vol.97
, Issue.22
, pp. 12115-12120
-
-
Marcotte, E.M.1
Xenarios, I.2
van der Bliek, A.M.3
Eisenberg, D.4
-
24
-
-
56649093012
-
POIMS: Positional Oligomer Importance Matrices - Understanding Support Vector Machine Based Signal Detectors
-
Zien, A., Sonnenburg, S., Philips, P., Rätsch, G.: POIMS: Positional Oligomer Importance Matrices - Understanding Support Vector Machine Based Signal Detectors. In: Proceedings of the 16th International Conference on Intelligent Systems for Molecular Biology (2008)
-
(2008)
Proceedings of the 16th International Conference on Intelligent Systems for Molecular Biology
-
-
Zien, A.1
Sonnenburg, S.2
Philips, P.3
Rätsch, G.4
-
25
-
-
39049189808
-
Significantly improved prediction of subcellular localization by integrating text and protein sequence data
-
Höglund, A., Blum, T., Brady, S., Dönnes, P., San Miguel, J., Rocheford, M., Kohlbacher, O., Shafkay, H.: Significantly improved prediction of subcellular localization by integrating text and protein sequence data. In: Pacific Symposium on Biocomputing, pp. 16-27 (2006)
-
(2006)
Pacific Symposium on Biocomputing
, pp. 16-27
-
-
Höglund, A.1
Blum, T.2
Brady, S.3
Dönnes, P.4
San Miguel, J.5
Rocheford, M.6
Kohlbacher, O.7
Shafkay, H.8
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