-
1
-
-
33644782643
-
-
Adl SM, Simpson AGB, Farmer MA, et al. (28 co-authors). 2005. The new higher level classification of eukaryotes with emphasis on the taxonomy of protists. J Eukaryot Microbiol. 52:399-451.
-
Adl SM, Simpson AGB, Farmer MA, et al. (28 co-authors). 2005. The new higher level classification of eukaryotes with emphasis on the taxonomy of protists. J Eukaryot Microbiol. 52:399-451.
-
-
-
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang JH, Zhang Z, Miller W, Lipman DJ. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.H.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
0037154011
-
A cyanobacterial gene in nonphotosynthetic protists - an early chloroplast acquisition in eukaryotes?
-
Andersson JO, Roger AJ. 2002. A cyanobacterial gene in nonphotosynthetic protists - an early chloroplast acquisition in eukaryotes? Curr Biol. 12:115-119.
-
(2002)
Curr Biol
, vol.12
, pp. 115-119
-
-
Andersson, J.O.1
Roger, A.J.2
-
4
-
-
10944260280
-
Genomic analysis of mutants affecting xanthophyll biosynthesis and regulation of photosynthetic light harvesting in Chlamydomonas reinhardtii
-
Anwaruzzaman M, Chin BL, Li XP, Lohr M, Martinez DA, Niyogi KK. 2004. Genomic analysis of mutants affecting xanthophyll biosynthesis and regulation of photosynthetic light harvesting in Chlamydomonas reinhardtii. Photosynth Res. 82:265-276.
-
(2004)
Photosynth Res
, vol.82
, pp. 265-276
-
-
Anwaruzzaman, M.1
Chin, B.L.2
Li, X.P.3
Lohr, M.4
Martinez, D.A.5
Niyogi, K.K.6
-
5
-
-
25144471592
-
Jumping genes and shrinking genomes - probing the evolution of eukaryotic photosynthesis with genomics
-
Archibald JM. 2005. Jumping genes and shrinking genomes - probing the evolution of eukaryotic photosynthesis with genomics. IUBMB Life. 57:539-547.
-
(2005)
IUBMB Life
, vol.57
, pp. 539-547
-
-
Archibald, J.M.1
-
6
-
-
6044252163
-
-
Armbrust EV, Berges JA, Bowler C, et al. (45 co-authors). 2004. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Science. 306:79-86.
-
Armbrust EV, Berges JA, Bowler C, et al. (45 co-authors). 2004. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Science. 306:79-86.
-
-
-
-
7
-
-
0142126882
-
Comparison of RNA expression profiles between the two generations of Porphyra yezoensis (Rhodophyta), based on expressed sequence tag frequency analysis
-
Asamizu E, Nakajima M, Kitade Y, Saga N, Nakamura Y, Tabata S. 2003. Comparison of RNA expression profiles between the two generations of Porphyra yezoensis (Rhodophyta), based on expressed sequence tag frequency analysis. J Phycol. 39:923-930.
-
(2003)
J Phycol
, vol.39
, pp. 923-930
-
-
Asamizu, E.1
Nakajima, M.2
Kitade, Y.3
Saga, N.4
Nakamura, Y.5
Tabata, S.6
-
8
-
-
23944527127
-
Chlorophyll c-containing plastid relationships based on analyses of a multigene data set with all four chromalveolate lineages
-
Bachvaroff TR, Sanchez-Puerta MV, Delwiche CF. 2005. Chlorophyll c-containing plastid relationships based on analyses of a multigene data set with all four chromalveolate lineages. Mol Biol Evol. 22:1772-1782.
-
(2005)
Mol Biol Evol
, vol.22
, pp. 1772-1782
-
-
Bachvaroff, T.R.1
Sanchez-Puerta, M.V.2
Delwiche, C.F.3
-
9
-
-
19044379861
-
Comparative genomics of two closely related unicellular thermo-acidophilic red algae, Galdieria sulphuraria and Cyanidioschyzon merolae, reveals the molecular basis of the metabolic flexibility of Galdieria sulphuraria and significant differences in carbohydrate metabolism of both algae
-
Barbier G, Oesterhelt C, Larson MD, Halgren RG, Wilkerson C, Garavito RM, Benning C, Weber APM. 2005. Comparative genomics of two closely related unicellular thermo-acidophilic red algae, Galdieria sulphuraria and Cyanidioschyzon merolae, reveals the molecular basis of the metabolic flexibility of Galdieria sulphuraria and significant differences in carbohydrate metabolism of both algae. Plant Physiol. 137:460-474.
-
(2005)
Plant Physiol
, vol.137
, pp. 460-474
-
-
Barbier, G.1
Oesterhelt, C.2
Larson, M.D.3
Halgren, R.G.4
Wilkerson, C.5
Garavito, R.M.6
Benning, C.7
Weber, A.P.M.8
-
10
-
-
33751082107
-
Subunit composition and pigmentation of fucoxanthin-chlorophyll proteins in diatoms: Evidence for a subunit involved in diadinoxanthin and diatoxanthin binding
-
Beer A, Gundermann K, Beckmann J, Büchel C. 2006. Subunit composition and pigmentation of fucoxanthin-chlorophyll proteins in diatoms: evidence for a subunit involved in diadinoxanthin and diatoxanthin binding. Biochemistry. 45:13046-13053.
-
(2006)
Biochemistry
, vol.45
, pp. 13046-13053
-
-
Beer, A.1
Gundermann, K.2
Beckmann, J.3
Büchel, C.4
-
11
-
-
0347635417
-
Photosynthetic eukaryotes unite: Endosymbiosis connects the dots
-
Bhattacharya D, Yoon HS, Hackett JD. 2004. Photosynthetic eukaryotes unite: endosymbiosis connects the dots. Bioessays. 26:50-60.
-
(2004)
Bioessays
, vol.26
, pp. 50-60
-
-
Bhattacharya, D.1
Yoon, H.S.2
Hackett, J.D.3
-
12
-
-
20644433743
-
Do plastid-related characters support the chromalveolate hypothesis?
-
Bodyl A. 2005. Do plastid-related characters support the chromalveolate hypothesis? J Phycol. 41:712-719.
-
(2005)
J Phycol
, vol.41
, pp. 712-719
-
-
Bodyl, A.1
-
13
-
-
27744577599
-
Biogenesis, molecular regulation and function of plant isoprenoids
-
Bouvier F, Rahier A, Camara B. 2005. Biogenesis, molecular regulation and function of plant isoprenoids. Prog Lipid Res. 44:357-429.
-
(2005)
Prog Lipid Res
, vol.44
, pp. 357-429
-
-
Bouvier, F.1
Rahier, A.2
Camara, B.3
-
14
-
-
0032546960
-
Xanthophyll cycle enzymes are members of the lipocalin family, the first identified from plants
-
Bugos RC, Hieber AD, Yamamoto HY. 1998. Xanthophyll cycle enzymes are members of the lipocalin family, the first identified from plants. J Biol Chem. 273:15321-15324.
-
(1998)
J Biol Chem
, vol.273
, pp. 15321-15324
-
-
Bugos, R.C.1
Hieber, A.D.2
Yamamoto, H.Y.3
-
15
-
-
0031586003
-
Prediction of complete gene structures in human genomic DNA
-
Burge C, Karlin S. 1997. Prediction of complete gene structures in human genomic DNA. J Mol Biol. 268:78-94.
-
(1997)
J Mol Biol
, vol.268
, pp. 78-94
-
-
Burge, C.1
Karlin, S.2
-
16
-
-
40749116835
-
Phylogenomics reshuffles the eukaryotic supergroups
-
Burki F, Shalchian-Tabrizi K, Minge M, Skjæveland Å, Nikolaev SI, Jakobsen KS, Pawlowski J. 2007. Phylogenomics reshuffles the eukaryotic supergroups. PLoS ONE. 2:e790.
-
(2007)
PLoS ONE
, vol.2
-
-
Burki, F.1
Shalchian-Tabrizi, K.2
Minge, M.3
Skjæveland, A.4
Nikolaev, S.I.5
Jakobsen, K.S.6
Pawlowski, J.7
-
17
-
-
46949092431
-
Phylogenomics reveals a new 'megagroup' including most photosynthetic eukaryotes
-
Burki F, Shalchian-Tabrizi K, Pawlowski J. 2008. Phylogenomics reveals a new 'megagroup' including most photosynthetic eukaryotes. Biol Lett. 4:366-369.
-
(2008)
Biol Lett
, vol.4
, pp. 366-369
-
-
Burki, F.1
Shalchian-Tabrizi, K.2
Pawlowski, J.3
-
18
-
-
0032838597
-
Principles of protein and lipid targeting in secondary symbiogenesis: Euglenoid, dinoflagellate, and sporozoan plastid origins and the eukaryote family tree
-
Cavalier-Smith T. 1999. Principles of protein and lipid targeting in secondary symbiogenesis: euglenoid, dinoflagellate, and sporozoan plastid origins and the eukaryote family tree. J Eukaryot Microbiol. 46:347-366.
-
(1999)
J Eukaryot Microbiol
, vol.46
, pp. 347-366
-
-
Cavalier-Smith, T.1
-
19
-
-
0042121237
-
Multiple sequence alignment with the Clustal series of programs
-
Chenna R, Sugawara H, Koike T, Lopez R, Gibson TJ, Higgins DG, Thompson JD. 2003. Multiple sequence alignment with the Clustal series of programs. Nucleic Acids Res. 31:3497-3500.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3497-3500
-
-
Chenna, R.1
Sugawara, H.2
Koike, T.3
Lopez, R.4
Gibson, T.J.5
Higgins, D.G.6
Thompson, J.D.7
-
20
-
-
26244463780
-
Candidatus Protochlamydia amoebophila', an endosymbiont of Acanthamoeba spp
-
Collingro A, Toenshoff ER, Taylor MW, Fritsche TR, Wagner M, Horn M. 2005. 'Candidatus Protochlamydia amoebophila', an endosymbiont of Acanthamoeba spp. Int J Syst Evol Microbiol. 55:1863-1866.
-
(2005)
Int J Syst Evol Microbiol
, vol.55
, pp. 1863-1866
-
-
Collingro, A.1
Toenshoff, E.R.2
Taylor, M.W.3
Fritsche, T.R.4
Wagner, M.5
Horn, M.6
-
22
-
-
0033963451
-
Identification of multi-gene families encoding isopentenyl diphosphate isomerase in plants by heterologous complementation in Escherichia coli
-
Cunningham FX, Gantt E. 2000. Identification of multi-gene families encoding isopentenyl diphosphate isomerase in plants by heterologous complementation in Escherichia coli. Plant Cell Physiol. 41:119-123.
-
(2000)
Plant Cell Physiol
, vol.41
, pp. 119-123
-
-
Cunningham, F.X.1
Gantt, E.2
-
23
-
-
0008167496
-
Delta pH-dependent photosystem II fluorescence quenching induced by saturating, multiturnover pulses in red algae
-
Delphin E, Duval JC, Etienne AL, Kirilovsky D. 1998. Delta pH-dependent photosystem II fluorescence quenching induced by saturating, multiturnover pulses in red algae. Plant Physiol. 118:103-113.
-
(1998)
Plant Physiol
, vol.118
, pp. 103-113
-
-
Delphin, E.1
Duval, J.C.2
Etienne, A.L.3
Kirilovsky, D.4
-
24
-
-
33746830079
-
-
Derelle E, Ferraz C, Rombauts S, et al. (26 co-authors). 2006. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Proc Natl Acad Sci USA. 103:11647-11652.
-
Derelle E, Ferraz C, Rombauts S, et al. (26 co-authors). 2006. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Proc Natl Acad Sci USA. 103:11647-11652.
-
-
-
-
25
-
-
0035953753
-
The highly reduced genome of an enslaved algal nucleus
-
Douglas S, Zauner S, Fraunholz M, Beaton M, Penny S, Deng LT, Wu XN, Reith M, Cavalier-Smith T, Maier UG. 2001. The highly reduced genome of an enslaved algal nucleus. Nature. 410:1091-1096.
-
(2001)
Nature
, vol.410
, pp. 1091-1096
-
-
Douglas, S.1
Zauner, S.2
Fraunholz, M.3
Beaton, M.4
Penny, S.5
Deng, L.T.6
Wu, X.N.7
Reith, M.8
Cavalier-Smith, T.9
Maier, U.G.10
-
26
-
-
3042666256
-
MUSCLE: Multiple sequence alignment with high accuracy and high throughput
-
Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32:1792-1797.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
27
-
-
0031106507
-
Algal carotenoids .63. Carotenoids from Prasinophyceae .7. Additional carotenoid prototype representatives and a general chemosystematic evaluation of carotenoids in Prasinophyceae (Chlorophyta)
-
Egeland ES, Guillard RRL, Liaaen-Jensen S. 1997. Algal carotenoids .63. Carotenoids from Prasinophyceae .7. Additional carotenoid prototype representatives and a general chemosystematic evaluation of carotenoids in Prasinophyceae (Chlorophyta). Phytochemistry. 44:1087-1097.
-
(1997)
Phytochemistry
, vol.44
, pp. 1087-1097
-
-
Egeland, E.S.1
Guillard, R.R.L.2
Liaaen-Jensen, S.3
-
28
-
-
0141538324
-
Chemical and mutational modification of histidines in violaxanthin deepoxidase from Spinacia oleracea
-
Emanuelsson A, Eskling M, Åkerlund HE. 2003. Chemical and mutational modification of histidines in violaxanthin deepoxidase from Spinacia oleracea. Physiol Plant. 119:97-104.
-
(2003)
Physiol Plant
, vol.119
, pp. 97-104
-
-
Emanuelsson, A.1
Eskling, M.2
Åkerlund, H.E.3
-
29
-
-
0035103466
-
Nuclear-encoded, plastid-targeted genes suggest a single common origin for apicomplexan and dinoflagellate plastids
-
Fast NM, Kissinger JC, Roos DS, Keeling PJ. 2001. Nuclear-encoded, plastid-targeted genes suggest a single common origin for apicomplexan and dinoflagellate plastids. Mol Biol Evol. 18:418-426.
-
(2001)
Mol Biol Evol
, vol.18
, pp. 418-426
-
-
Fast, N.M.1
Kissinger, J.C.2
Roos, D.S.3
Keeling, P.J.4
-
31
-
-
7444220226
-
Role of histidines in the binding of violaxanthin de-epoxidase to the thylakoid membrane as studied by site-directed mutagenesis
-
Gisselsson A, Szilágyi A, Åkerlund HE. 2004. Role of histidines in the binding of violaxanthin de-epoxidase to the thylakoid membrane as studied by site-directed mutagenesis. Physiol Plant. 122:337-343.
-
(2004)
Physiol Plant
, vol.122
, pp. 337-343
-
-
Gisselsson, A.1
Szilágyi, A.2
Åkerlund, H.E.3
-
32
-
-
0242478042
-
The evolution of light-harvesting antennas
-
Green BR, Parson WW, editors, Dordrecht The Netherlands, Kluwer Academic Publishers. p
-
Green BR. 2003. The evolution of light-harvesting antennas. In: Green BR, Parson WW, editors. Light-harvesting antennas in photosynthesis. Dordrecht (The Netherlands): Kluwer Academic Publishers. p. 129-168.
-
(2003)
Light-harvesting antennas in photosynthesis
, pp. 129-168
-
-
Green, B.R.1
-
33
-
-
0025130626
-
Light-harvesting proteins of diatoms: Their relationship to the chlorophyll a/b binding proteins of higher plants and their mode of transport into plastids
-
Grossman A, Manodori A, Snyder D. 1990. Light-harvesting proteins of diatoms: their relationship to the chlorophyll a/b binding proteins of higher plants and their mode of transport into plastids. Mol Gen Genet. 224:91-100.
-
(1990)
Mol Gen Genet
, vol.224
, pp. 91-100
-
-
Grossman, A.1
Manodori, A.2
Snyder, D.3
-
34
-
-
10944249480
-
Chlamydomonas reinhardtii in the landscape of pigments
-
Grossman AR, Lohr M, Im CS. 2004. Chlamydomonas reinhardtii in the landscape of pigments. Annu Rev Genet. 38:119-173.
-
(2004)
Annu Rev Genet
, vol.38
, pp. 119-173
-
-
Grossman, A.R.1
Lohr, M.2
Im, C.S.3
-
35
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S, Gascuel O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol. 52:696-704.
-
(2003)
Syst Biol
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
36
-
-
37749026998
-
The fluorescence yield of the trimeric fucoxanthin-chlorophyll-protein FCPa in the diatom Cyclotella meneghiniana is dependent on the amount of bound diatoxanthin
-
Gundermann K, Büchel C. 2008. The fluorescence yield of the trimeric fucoxanthin-chlorophyll-protein FCPa in the diatom Cyclotella meneghiniana is dependent on the amount of bound diatoxanthin. Photosynth Res. 95:229-235.
-
(2008)
Photosynth Res
, vol.95
, pp. 229-235
-
-
Gundermann, K.1
Büchel, C.2
-
37
-
-
0033823160
-
The phylogeny of proteobacteria: Relationships to other eubacterial phyla and eukaryotes
-
Gupta RS. 2000. The phylogeny of proteobacteria: relationships to other eubacterial phyla and eukaryotes. FEMS Microbiol Rev. 24:367-402.
-
(2000)
FEMS Microbiol Rev
, vol.24
, pp. 367-402
-
-
Gupta, R.S.1
-
38
-
-
34547754024
-
Phylogenomic analysis supports the monophyly of cryptophytes and haptophytes and the association of Rhizaria with chromalveolates
-
Hackett JD, Yoon HS, Li S, Reyes-Prieto A, Rummele SE, Bhattacharya D. 2007. Phylogenomic analysis supports the monophyly of cryptophytes and haptophytes and the association of Rhizaria with chromalveolates. Mol Biol Evol. 24:1702-1713.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1702-1713
-
-
Hackett, J.D.1
Yoon, H.S.2
Li, S.3
Reyes-Prieto, A.4
Rummele, S.E.5
Bhattacharya, D.6
-
39
-
-
56449114676
-
-
Hall TA. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/ NT. Nucleic Acids Symp Ser. 41:95-98.
-
Hall TA. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/ NT. Nucleic Acids Symp Ser. 41:95-98.
-
-
-
-
40
-
-
0344440735
-
Nucleus-encoded, plastid-targeted glyceraldehyde-3-phosphate dehydrogenase (GAPDH) indicates a single origin for chromalveolate plastids
-
Harper JT, Keeling PJ. 2003. Nucleus-encoded, plastid-targeted glyceraldehyde-3-phosphate dehydrogenase (GAPDH) indicates a single origin for chromalveolate plastids. Mol Biol Evol. 20:1730-1735.
-
(2003)
Mol Biol Evol
, vol.20
, pp. 1730-1735
-
-
Harper, J.T.1
Keeling, P.J.2
-
41
-
-
13244270095
-
On the monophyly of chromalveolates using a six-protein phylogeny of eukaryotes
-
Harper JT, Waanders E, Keeling PJ. 2005. On the monophyly of chromalveolates using a six-protein phylogeny of eukaryotes. Int J Syst Evol Microbiol. 55:487-496.
-
(2005)
Int J Syst Evol Microbiol
, vol.55
, pp. 487-496
-
-
Harper, J.T.1
Waanders, E.2
Keeling, P.J.3
-
43
-
-
23644441921
-
Control of the light harvesting function of chloroplast membranes: The LHCII-aggregation model for non-photochemical quenching
-
Horton P, Wentworth M, Ruban A. 2005. Control of the light harvesting function of chloroplast membranes: the LHCII-aggregation model for non-photochemical quenching. FEBS Lett. 579:4201-4206.
-
(2005)
FEBS Lett
, vol.579
, pp. 4201-4206
-
-
Horton, P.1
Wentworth, M.2
Ruban, A.3
-
44
-
-
39549122214
-
Did an ancient chlamydial endosymbiosis facilitate the establishment of primary plastids?
-
Huang JL, Gogarten JP. 2007. Did an ancient chlamydial endosymbiosis facilitate the establishment of primary plastids? Genome Biol. 8:R99.
-
(2007)
Genome Biol
, vol.8
-
-
Huang, J.L.1
Gogarten, J.P.2
-
45
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogenetic trees
-
Huelsenbeck JP, Ronquist F. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics. 17:754-755.
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
46
-
-
0037047078
-
Second- and third-hand chloroplasts in dinoflagellates: Phylogeny of oxygen-evolving enhancer 1 (PsbO) protein reveals replacement of a nuclear-encoded plastid gene by that of a haptophyte tertiary endosymbiont
-
Ishida K, Green BR. 2002. Second- and third-hand chloroplasts in dinoflagellates: phylogeny of oxygen-evolving enhancer 1 (PsbO) protein reveals replacement of a nuclear-encoded plastid gene by that of a haptophyte tertiary endosymbiont. Proc Natl Acad Sci USA. 99:9294-9299.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 9294-9299
-
-
Ishida, K.1
Green, B.R.2
-
47
-
-
36148946687
-
Tryptophan biosynthesis in stramenopiles: Eukaryotic winners in the diatom complex chloroplast
-
Jiroutova K, Horak A, Bowler C, Oborník M. 2007. Tryptophan biosynthesis in stramenopiles: eukaryotic winners in the diatom complex chloroplast. J Mol Evol. 65:496-511.
-
(2007)
J Mol Evol
, vol.65
, pp. 496-511
-
-
Jiroutova, K.1
Horak, A.2
Bowler, C.3
Oborník, M.4
-
48
-
-
13244259056
-
Diversity and evolutionary history of plastids and their hosts
-
Keeling PJ. 2004. Diversity and evolutionary history of plastids and their hosts. Am J Bot. 91:1481-1493.
-
(2004)
Am J Bot
, vol.91
, pp. 1481-1493
-
-
Keeling, P.J.1
-
49
-
-
34547781748
-
Plastid genome sequence of the cryptophyte alga Rhodomonas salina CCMP1319: Lateral transfer of putative DNA replication machinery and a test of chromist plastid phylogeny
-
Khan H, Parks N, Kozera C, Curtis BA, Parsons BJ, Bowman S, Archibald JM. 2007. Plastid genome sequence of the cryptophyte alga Rhodomonas salina CCMP1319: lateral transfer of putative DNA replication machinery and a test of chromist plastid phylogeny. Mol Biol Evol. 24:1832-1842.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1832-1842
-
-
Khan, H.1
Parks, N.2
Kozera, C.3
Curtis, B.A.4
Parsons, B.J.5
Bowman, S.6
Archibald, J.M.7
-
50
-
-
34249814314
-
Tracing the evolution of the light-harvesting antennae in chlorophyll a/b-containing organisms
-
Koziol AG, Borza T, Ishida KI, Keeling P, Lee RW, Durnford DG. 2007. Tracing the evolution of the light-harvesting antennae in chlorophyll a/b-containing organisms. Plant Physiol. 143:1802-1816.
-
(2007)
Plant Physiol
, vol.143
, pp. 1802-1816
-
-
Koziol, A.G.1
Borza, T.2
Ishida, K.I.3
Keeling, P.4
Lee, R.W.5
Durnford, D.G.6
-
51
-
-
0038554229
-
Genome organization in Arabidopsis thaliana: A survey for genes involved in isoprenoid and chlorophyll metabolism
-
Lange BM, Ghassemian M. 2003. Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism. Plant Mol Biol. 51:925-948.
-
(2003)
Plant Mol Biol
, vol.51
, pp. 925-948
-
-
Lange, B.M.1
Ghassemian, M.2
-
52
-
-
0034700150
-
Isoprenoid biosynthesis: The evolution of two ancient and distinct pathways across genomes
-
Lange BM, Rujan T, Martin W, Croteau R. 2000. Isoprenoid biosynthesis: the evolution of two ancient and distinct pathways across genomes. Proc Natl Acad Sci USA. 97:13172-13177.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 13172-13177
-
-
Lange, B.M.1
Rujan, T.2
Martin, W.3
Croteau, R.4
-
53
-
-
38949160209
-
Fast regulation of photosynthesis in diatoms: Mechanisms, evolution and ecophysiology
-
Lavaud J. 2007. Fast regulation of photosynthesis in diatoms: mechanisms, evolution and ecophysiology. Funct Plant Sci Biotechnol. 1:267-287.
-
(2007)
Funct Plant Sci Biotechnol
, vol.1
, pp. 267-287
-
-
Lavaud, J.1
-
54
-
-
33244468402
-
Phylogenomic analysis identifies red algal genes of endosymbiotic origin in the chromalveolates
-
Li SL, Nosenko T, Hackett JD, Bhattacharya D. 2006. Phylogenomic analysis identifies red algal genes of endosymbiotic origin in the chromalveolates. Mol Biol Evol. 23:663-674.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 663-674
-
-
Li, S.L.1
Nosenko, T.2
Hackett, J.D.3
Bhattacharya, D.4
-
55
-
-
27244453757
-
Genome-based examination of chlorophyll and carotenoid biosynthesis in Chlamydomonas reinhardtii
-
Lohr M, Im CS, Grossman AR. 2005. Genome-based examination of chlorophyll and carotenoid biosynthesis in Chlamydomonas reinhardtii. Plant Physiol. 138:490-515.
-
(2005)
Plant Physiol
, vol.138
, pp. 490-515
-
-
Lohr, M.1
Im, C.S.2
Grossman, A.R.3
-
56
-
-
0033587763
-
Algae displaying the diadinoxanthin cycle also possess the violaxanthin cycle
-
Lohr M, Wilhelm C. 1999. Algae displaying the diadinoxanthin cycle also possess the violaxanthin cycle. Proc Natl Acad Sci USA. 96:8784-8789.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 8784-8789
-
-
Lohr, M.1
Wilhelm, C.2
-
57
-
-
0035126918
-
Xanthophyll synthesis in diatoms: Quantification of putative intermediates and comparison of pigment conversion kinetics with rate constants derived from a model
-
Lohr M, Wilhelm C. 2001. Xanthophyll synthesis in diatoms: quantification of putative intermediates and comparison of pigment conversion kinetics with rate constants derived from a model. Planta. 212:382-391.
-
(2001)
Planta
, vol.212
, pp. 382-391
-
-
Lohr, M.1
Wilhelm, C.2
-
58
-
-
0033381389
-
Mesostigmatophyceae, a new class of streptophyte green algae revealed by SSU rRNA sequence comparisons
-
Marin B, Melkonian M. 1999. Mesostigmatophyceae, a new class of streptophyte green algae revealed by SSU rRNA sequence comparisons. Protist. 150:399-417.
-
(1999)
Protist
, vol.150
, pp. 399-417
-
-
Marin, B.1
Melkonian, M.2
-
59
-
-
4544249478
-
Carotenoid composition of Delesseria lancifolia and other marine red algae from polar and temperate habitats
-
Marquardt J, Hanelt D. 2004. Carotenoid composition of Delesseria lancifolia and other marine red algae from polar and temperate habitats. Eur J Phycol. 39:285-292.
-
(2004)
Eur J Phycol
, vol.39
, pp. 285-292
-
-
Marquardt, J.1
Hanelt, D.2
-
60
-
-
0037126071
-
Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus
-
Martin W, Rujan T, Richly E, Hansen A, Cornelsen S, Lins T, Leister D, Stoebe B, Hasegawa M, Penny D. 2002. Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus. Proc Natl Acad Sci USA. 99:12246-12251.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 12246-12251
-
-
Martin, W.1
Rujan, T.2
Richly, E.3
Hansen, A.4
Cornelsen, S.5
Lins, T.6
Leister, D.7
Stoebe, B.8
Hasegawa, M.9
Penny, D.10
-
61
-
-
11144354393
-
-
Matsuzaki M, Misumi O, Shin-I T, et al. (42 co-authors). 2004. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Nature. 428:653-657.
-
Matsuzaki M, Misumi O, Shin-I T, et al. (42 co-authors). 2004. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Nature. 428:653-657.
-
-
-
-
62
-
-
0032536848
-
Gene structure, expression in Escherichia coli and biochemical properties of the NAD(+)-dependent glyceraldehyde-3-phosphate dehydrogenase from Pinus sylvestris chloroplasts
-
Meyer-Gauen G, Herbrand H, Pahnke J, Cerff R, Martin W. 1998. Gene structure, expression in Escherichia coli and biochemical properties of the NAD(+)-dependent glyceraldehyde-3-phosphate dehydrogenase from Pinus sylvestris chloroplasts. Gene. 209:167-174.
-
(1998)
Gene
, vol.209
, pp. 167-174
-
-
Meyer-Gauen, G.1
Herbrand, H.2
Pahnke, J.3
Cerff, R.4
Martin, W.5
-
63
-
-
0034604170
-
The origin of red algae and the evolution of chloroplasts
-
Moreira D, Le Guyader H, Philippe H. 2000. The origin of red algae and the evolution of chloroplasts. Nature. 405:69-72.
-
(2000)
Nature
, vol.405
, pp. 69-72
-
-
Moreira, D.1
Le Guyader, H.2
Philippe, H.3
-
64
-
-
0242309100
-
Mechanistic aspects of the xanthophyll dynamics in higher plant thylakoids
-
Morosinotto T, Caffarri S, Dall'Osto L, Bassi R. 2003. Mechanistic aspects of the xanthophyll dynamics in higher plant thylakoids. Physiol Plant. 119:347-354.
-
(2003)
Physiol Plant
, vol.119
, pp. 347-354
-
-
Morosinotto, T.1
Caffarri, S.2
Dall'Osto, L.3
Bassi, R.4
-
65
-
-
48249125417
-
Chlamydiae have contributed over sixty genes to plantae with a variety of different functions
-
Moustafa A, Reyes-Prieto A, Bhattacharya D. 2008. Chlamydiae have contributed over sixty genes to plantae with a variety of different functions. PLoS ONE. 3:e2205.
-
(2008)
PLoS ONE
, vol.3
-
-
Moustafa, A.1
Reyes-Prieto, A.2
Bhattacharya, D.3
-
66
-
-
0035028317
-
Non-photochemical quenching. A response to excess light energy
-
Müller P, Li XP, Niyogi KK. 2001. Non-photochemical quenching. A response to excess light energy. Plant Physiol. 125:1558-1566.
-
(2001)
Plant Physiol
, vol.125
, pp. 1558-1566
-
-
Müller, P.1
Li, X.P.2
Niyogi, K.K.3
-
67
-
-
13944258526
-
Is PsbS the site of non-photochemical quenching in photosynthesis?
-
Niyogi KK, Li XP, Rosenberg V, Jung HS. 2005. Is PsbS the site of non-photochemical quenching in photosynthesis? J Exp Bot. 56:375-382.
-
(2005)
J Exp Bot
, vol.56
, pp. 375-382
-
-
Niyogi, K.K.1
Li, X.P.2
Rosenberg, V.3
Jung, H.S.4
-
68
-
-
35948973954
-
Horizontal gene transfer in chromalveolates
-
Nosenko T, Bhattacharya D. 2007. Horizontal gene transfer in chromalveolates. BMC Evol Biol. 7:173.
-
(2007)
BMC Evol Biol
, vol.7
, pp. 173
-
-
Nosenko, T.1
Bhattacharya, D.2
-
69
-
-
33749542719
-
US Department of Energy-Joint Genome Institute, Chimeric plastid proteome in the Florida "red tide" dinoflagellate Karenia brevis
-
Nosenko T, Lidie KL, Van Dolah FM, Lindquist E, Cheng JF, Bhattacharya D. 2006. US Department of Energy-Joint Genome Institute, Chimeric plastid proteome in the Florida "red tide" dinoflagellate Karenia brevis. Mol Biol Evol. 23:2026-2038.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 2026-2038
-
-
Nosenko, T.1
Lidie, K.L.2
Van Dolah, F.M.3
Lindquist, E.4
Cheng, J.F.5
Bhattacharya, D.6
-
70
-
-
33846502698
-
Picobiliphytes: A marine picoplanktonic algal group with unknown affinities to other eukaryotes
-
Not F, Valentin K, Romari K, Lovejoy C, Massana R, Tobe K, Vaulot D, Medlin LK. 2007. Picobiliphytes: a marine picoplanktonic algal group with unknown affinities to other eukaryotes. Science. 315:253-255.
-
(2007)
Science
, vol.315
, pp. 253-255
-
-
Not, F.1
Valentin, K.2
Romari, K.3
Lovejoy, C.4
Massana, R.5
Tobe, K.6
Vaulot, D.7
Medlin, L.K.8
-
71
-
-
26044468458
-
A new scenario of plastid evolution: Plastid primary endosymbiosis before the divergence of the "Plantae," emended
-
Nozaki H. 2005. A new scenario of plastid evolution: plastid primary endosymbiosis before the divergence of the "Plantae," emended. J Plant Res. 118:247-255.
-
(2005)
J Plant Res
, vol.118
, pp. 247-255
-
-
Nozaki, H.1
-
72
-
-
34547785048
-
Phylogeny of primary photosynthetic eukaryotes as deduced from slowly evolving nuclear genes
-
Nozaki H, Iseki M, Hasegawa M, Misawa K, Nakada T, Sasaki N, Watanabe M. 2007. Phylogeny of primary photosynthetic eukaryotes as deduced from slowly evolving nuclear genes. Mol Biol Evol. 24:1592-1595.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1592-1595
-
-
Nozaki, H.1
Iseki, M.2
Hasegawa, M.3
Misawa, K.4
Nakada, T.5
Sasaki, N.6
Watanabe, M.7
-
73
-
-
0037381973
-
The phylogenetic position of red algae revealed by multiple nuclear genes from mitochondria-containing eukaryotes and an alternative hypothesis on the origin of plastids
-
Nozaki H, Matsuzaki M, Takahara M, Misumi O, Kuroiwa H, Hasegawa M, Shin-I T, Kohara Y, Ogasawara N, Kuroiwa T. 2003. The phylogenetic position of red algae revealed by multiple nuclear genes from mitochondria-containing eukaryotes and an alternative hypothesis on the origin of plastids. J Mol Evol. 56:485-497.
-
(2003)
J Mol Evol
, vol.56
, pp. 485-497
-
-
Nozaki, H.1
Matsuzaki, M.2
Takahara, M.3
Misumi, O.4
Kuroiwa, H.5
Hasegawa, M.6
Shin-I, T.7
Kohara, Y.8
Ogasawara, N.9
Kuroiwa, T.10
-
74
-
-
27844552845
-
Mosaic origin of the heme biosynthesis pathway in photosynthetic eukaryotes
-
Oborník M, Green BR. 2005. Mosaic origin of the heme biosynthesis pathway in photosynthetic eukaryotes. Mol Biol Evol. 22:2343-2353.
-
(2005)
Mol Biol Evol
, vol.22
, pp. 2343-2353
-
-
Oborník, M.1
Green, B.R.2
-
75
-
-
34250689932
-
-
Palenik B, Grimwood J, Aerts A, et al. (38 co-authors). 2007. The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation. Proc Natl Acad Sci USA. 104:7705-7710.
-
Palenik B, Grimwood J, Aerts A, et al. (38 co-authors). 2007. The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation. Proc Natl Acad Sci USA. 104:7705-7710.
-
-
-
-
76
-
-
0037327022
-
The symbiotic birth and spread of plastids: How many times and whodunit?
-
Palmer JD. 2003. The symbiotic birth and spread of plastids: how many times and whodunit? J Phycol. 39:4-11.
-
(2003)
J Phycol
, vol.39
, pp. 4-11
-
-
Palmer, J.D.1
-
77
-
-
34247899047
-
Multiple gene phylogenies support the monophyly of cryptomonad and haptophyte host lineages
-
Patron NJ, Inagaki Y, Keeling PJ. 2007. Multiple gene phylogenies support the monophyly of cryptomonad and haptophyte host lineages. Curr Biol. 17:887-891.
-
(2007)
Curr Biol
, vol.17
, pp. 887-891
-
-
Patron, N.J.1
Inagaki, Y.2
Keeling, P.J.3
-
78
-
-
6344265521
-
Gene replacement of fructose-1,6-bisphosphate aldolase supports the hypothesis of a single photosynthetic ancestor of chromalveolates
-
Patron NJ, Rogers MB, Keeling PJ. 2004. Gene replacement of fructose-1,6-bisphosphate aldolase supports the hypothesis of a single photosynthetic ancestor of chromalveolates. Eukaryot Cell. 3:1169-1175.
-
(2004)
Eukaryot Cell
, vol.3
, pp. 1169-1175
-
-
Patron, N.J.1
Rogers, M.B.2
Keeling, P.J.3
-
79
-
-
33645100385
-
A tertiary plastid uses genes from two endosymbionts
-
Patron NJ, Waller RF, Keeling PJ. 2006. A tertiary plastid uses genes from two endosymbionts. J Mol Biol. 357:1373-1382.
-
(2006)
J Mol Biol
, vol.357
, pp. 1373-1382
-
-
Patron, N.J.1
Waller, R.F.2
Keeling, P.J.3
-
80
-
-
47749116396
-
A nonphotochemical quenching mutant of Chlamydomonas reveals a role for L1818/LHCSR proteins
-
Peers G, Truong T, Elrad D, Grossman A, Niyogi K. 2007. A nonphotochemical quenching mutant of Chlamydomonas reveals a role for L1818/LHCSR proteins. Photosynth Res. 91:250.
-
(2007)
Photosynth Res
, vol.91
, pp. 250
-
-
Peers, G.1
Truong, T.2
Elrad, D.3
Grossman, A.4
Niyogi, K.5
-
81
-
-
34548501300
-
Phylogeny of Calvin cycle enzymes supports Plantae monophyly
-
Reyes-Prieto A, Bhattacharya D. 2007. Phylogeny of Calvin cycle enzymes supports Plantae monophyly. Mol Phylogenet Evol. 45:384-391.
-
(2007)
Mol Phylogenet Evol
, vol.45
, pp. 384-391
-
-
Reyes-Prieto, A.1
Bhattacharya, D.2
-
82
-
-
33751422757
-
Cyanobacterial contribution to algal nuclear genomes is primarily limited to plastid functions
-
Reyes-Prieto A, Hackett JD, Soares MB, Bonaldo MF, Bhattacharya D. 2006. Cyanobacterial contribution to algal nuclear genomes is primarily limited to plastid functions. Curr Biol. 16:2320-2325.
-
(2006)
Curr Biol
, vol.16
, pp. 2320-2325
-
-
Reyes-Prieto, A.1
Hackett, J.D.2
Soares, M.B.3
Bonaldo, M.F.4
Bhattacharya, D.5
-
83
-
-
33748895571
-
An exceptional horizontal gene transfer in plastids: Gene replacement by a distant bacterial paralog and evidence that haptophyte and cryptophyte plastids are sisters
-
Rice DW, Palmer JD. 2006. An exceptional horizontal gene transfer in plastids: gene replacement by a distant bacterial paralog and evidence that haptophyte and cryptophyte plastids are sisters. BMC Biol. 4:31.
-
(2006)
BMC Biol
, vol.4
, pp. 31
-
-
Rice, D.W.1
Palmer, J.D.2
-
84
-
-
0034048274
-
Characterization of the LI818 polypeptide from the green unicellular alga Chlamydomonas reinhardtii
-
Richard C, Ouellet H, Guertin M. 2000. Characterization of the LI818 polypeptide from the green unicellular alga Chlamydomonas reinhardtii. Plant Mol Biol. 42:303-316.
-
(2000)
Plant Mol Biol
, vol.42
, pp. 303-316
-
-
Richard, C.1
Ouellet, H.2
Guertin, M.3
-
85
-
-
33748857142
-
Evolutionary origins of the eukaryotic shikimate pathway: Gene fusions, horizontal gene transfer, and endosymbiotic replacements
-
Richards TA, Dacks JB, Campbell SA, Blanchard JL, Foster PG, McLeod R, Roberts CW. 2006. Evolutionary origins of the eukaryotic shikimate pathway: gene fusions, horizontal gene transfer, and endosymbiotic replacements. Eukaryot Cell. 5:1517-1531.
-
(2006)
Eukaryot Cell
, vol.5
, pp. 1517-1531
-
-
Richards, T.A.1
Dacks, J.B.2
Campbell, S.A.3
Blanchard, J.L.4
Foster, P.G.5
McLeod, R.6
Roberts, C.W.7
-
86
-
-
0036851226
-
Elucidation of the methylerythritol phosphate pathway for isoprenoid biosynthesis in bacteria and plastids. A metabolic milestone achieved through genomics
-
Rodríguez-Concepción M, Boronat A. 2002. Elucidation of the methylerythritol phosphate pathway for isoprenoid biosynthesis in bacteria and plastids. A metabolic milestone achieved through genomics. Plant Physiol. 130:1079-1089.
-
(2002)
Plant Physiol
, vol.130
, pp. 1079-1089
-
-
Rodríguez-Concepción, M.1
Boronat, A.2
-
87
-
-
22744445156
-
Monophyly of primary photosynthetic eukaryotes: Green plants, red algae, and glaucophytes
-
Rodríguez-Ezpeleta N, Brinkmann H, Burey SC, Roure B, Burger G, Löffelhardt W, Bohnert HJ, Philippe H, Lang BF. 2005. Monophyly of primary photosynthetic eukaryotes: green plants, red algae, and glaucophytes. Curr Biol. 15:1325-1330.
-
(2005)
Curr Biol
, vol.15
, pp. 1325-1330
-
-
Rodríguez-Ezpeleta, N.1
Brinkmann, H.2
Burey, S.C.3
Roure, B.4
Burger, G.5
Löffelhardt, W.6
Bohnert, H.J.7
Philippe, H.8
Lang, B.F.9
-
88
-
-
34547883900
-
Toward resolving the eukaryotic tree: The phylogenetic positions of jakobids and cercozoans
-
Rodríguez-Ezpeleta N, Brinkmann H, Burger G, Roger AJ, Gray MW, Philippe H, Lang BF. 2007. Toward resolving the eukaryotic tree: the phylogenetic positions of jakobids and cercozoans. Curr Biol. 17:1420-1425.
-
(2007)
Curr Biol
, vol.17
, pp. 1420-1425
-
-
Rodríguez-Ezpeleta, N.1
Brinkmann, H.2
Burger, G.3
Roger, A.J.4
Gray, M.W.5
Philippe, H.6
Lang, B.F.7
-
89
-
-
33845891330
-
The complete chloroplast genome of the chlorarachniophyte Bigelowiella natans: Evidence for independent origins of chlorarachniophyte and euglenid secondary endosymbionts
-
Rogers MB, Gilson PR, Su V, McFadden GI, Keeling PJ. 2007. The complete chloroplast genome of the chlorarachniophyte Bigelowiella natans: evidence for independent origins of chlorarachniophyte and euglenid secondary endosymbionts. Mol Biol Evol. 24:54-62.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 54-62
-
-
Rogers, M.B.1
Gilson, P.R.2
Su, V.3
McFadden, G.I.4
Keeling, P.J.5
-
90
-
-
0037313208
-
Mevalonate-independent methylerythritol phosphate pathway for isoprenoid biosynthesis. Elucidation and distribution
-
Rohmer M. 2003. Mevalonate-independent methylerythritol phosphate pathway for isoprenoid biosynthesis. Elucidation and distribution. Pure Appl Chem. 75:375-387.
-
(2003)
Pure Appl Chem
, vol.75
, pp. 375-387
-
-
Rohmer, M.1
-
91
-
-
34447271967
-
Sorting wheat from chaff in multi-gene analyses of chlorophyll c-containing plastids
-
Sanchez-Puerta MV, Bachvaroff TR, Delwiche CF. 2007. Sorting wheat from chaff in multi-gene analyses of chlorophyll c-containing plastids. Mol Phylogenet Evol. 44:885-897.
-
(2007)
Mol Phylogenet Evol
, vol.44
, pp. 885-897
-
-
Sanchez-Puerta, M.V.1
Bachvaroff, T.R.2
Delwiche, C.F.3
-
92
-
-
0036896020
-
Molecular evolution of carotenoid biosynthesis from bacteria to plants
-
Sandmann G. 2002. Molecular evolution of carotenoid biosynthesis from bacteria to plants. Physiol Plant. 116:431-440.
-
(2002)
Physiol Plant
, vol.116
, pp. 431-440
-
-
Sandmann, G.1
-
93
-
-
44349187651
-
Relationship between photosynthesis and non-photochemical quenching of chlorophyll fluorescence in two red algae with different carotenoid compositions
-
Schubert H, Andersson M, Snoeijs P. 2006. Relationship between photosynthesis and non-photochemical quenching of chlorophyll fluorescence in two red algae with different carotenoid compositions. Mar Biol. 149:1003-1013.
-
(2006)
Mar Biol
, vol.149
, pp. 1003-1013
-
-
Schubert, H.1
Andersson, M.2
Snoeijs, P.3
-
95
-
-
14344273992
-
-
Seoighe C, Federspiel N, Jones T, et al. (20 co-authors). 2000. Prevalence of small inversions in yeast gene order evolution. Proc Natl Acad Sci USA. 97:14433-14437.
-
Seoighe C, Federspiel N, Jones T, et al. (20 co-authors). 2000. Prevalence of small inversions in yeast gene order evolution. Proc Natl Acad Sci USA. 97:14433-14437.
-
-
-
-
96
-
-
33748041084
-
Heterotachy processes in rhodophyte-derived secondhand plastid genes: Implications for addressing the origin and evolution of dinoflagellate plastids
-
Shalchian-Tabrizi K, Skånseng M, Ronquist F, Klaveness D, Bachvaroff TR, Delwiche CF, Botnen A, Tengs T, Jakobsen KS. 2006. Heterotachy processes in rhodophyte-derived secondhand plastid genes: implications for addressing the origin and evolution of dinoflagellate plastids. Mol Biol Evol. 23: 1504-1515.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 1504-1515
-
-
Shalchian-Tabrizi, K.1
Skånseng, M.2
Ronquist, F.3
Klaveness, D.4
Bachvaroff, T.R.5
Delwiche, C.F.6
Botnen, A.7
Tengs, T.8
Jakobsen, K.S.9
-
97
-
-
33750403801
-
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
Stamatakis A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics. 22:2688-2690.
-
(2006)
Bioinformatics
, vol.22
, pp. 2688-2690
-
-
Stamatakis, A.1
-
98
-
-
4644282569
-
-
Sterky F, Bhalerao RR, Unneberg P, et al. (19 co-authors). 2004. A Populus EST resource for plant functional genomics. Proc Natl Acad Sci USA. 101:13951-13956.
-
Sterky F, Bhalerao RR, Unneberg P, et al. (19 co-authors). 2004. A Populus EST resource for plant functional genomics. Proc Natl Acad Sci USA. 101:13951-13956.
-
-
-
-
100
-
-
23744464776
-
Light and oxygenic photosynthesis: Energy dissipation as a protection mechanism against photo-oxidation
-
6:629-634
-
Szabo I, Bergantino E, Giacometti GM. 2005. Light and oxygenic photosynthesis: energy dissipation as a protection mechanism against photo-oxidation. EMBO Rep. 6:629-634.
-
(2005)
EMBO Rep
-
-
Szabo, I.1
Bergantino, E.2
Giacometti, G.M.3
-
101
-
-
40849124801
-
Host origin of plastid solute transporters in the first photosynthetic eukaryotes
-
Tyra HM, Linka M, Weber AP, Bhattacharya D. 2007. Host origin of plastid solute transporters in the first photosynthetic eukaryotes. Genome Biol. 8:R212.
-
(2007)
Genome Biol
, vol.8
-
-
Tyra, H.M.1
Linka, M.2
Weber, A.P.3
Bhattacharya, D.4
-
102
-
-
0037601745
-
Intraspecific variation of photosynthesis, respiration and photoprotective carotenoids in Gracilaria birdiae (Gracilariales: Rhodophyta)
-
Ursi S, Pedersen M, Plastino E, Snoeijs P. 2003. Intraspecific variation of photosynthesis, respiration and photoprotective carotenoids in Gracilaria birdiae (Gracilariales: Rhodophyta). Mar Biol. 142:997-1007.
-
(2003)
Mar Biol
, vol.142
, pp. 997-1007
-
-
Ursi, S.1
Pedersen, M.2
Plastino, E.3
Snoeijs, P.4
-
103
-
-
33747415749
-
-
Wilhelm C, Büchel C, Fisahn J, et al. (12 co-authors). 2006. The regulation of carbon and nutrient assimilation in diatoms is significantly different from green algae. Protist. 157:91-124.
-
Wilhelm C, Büchel C, Fisahn J, et al. (12 co-authors). 2006. The regulation of carbon and nutrient assimilation in diatoms is significantly different from green algae. Protist. 157:91-124.
-
-
-
-
104
-
-
33745445226
-
A soluble carotenoid protein involved in phycobilisome-related energy dissipation in cyanobacteria
-
Wilson A, Ajlani G, Verbavatz JM, Vass I, Kerfeld CA, Kirilovskya D. 2006. A soluble carotenoid protein involved in phycobilisome-related energy dissipation in cyanobacteria. Plant Cell. 18:992-1007.
-
(2006)
Plant Cell
, vol.18
, pp. 992-1007
-
-
Wilson, A.1
Ajlani, G.2
Verbavatz, J.M.3
Vass, I.4
Kerfeld, C.A.5
Kirilovskya, D.6
-
105
-
-
50149083653
-
-
Wilson A, Punginelli C, Gall A, et al. (11 co-authors). 2008. A photoactive carotenoid protein acting as light intensity sensor. Proc Natl Acad Sci USA. 105:12075-12080.
-
Wilson A, Punginelli C, Gall A, et al. (11 co-authors). 2008. A photoactive carotenoid protein acting as light intensity sensor. Proc Natl Acad Sci USA. 105:12075-12080.
-
-
-
-
106
-
-
39749201627
-
Broadly sampled multigene trees of eukaryotes
-
Yoon HS, Grant J, Tekle Y, Wu M, Chaon B, Cole J, Logsdon J, Patterson D, Bhattacharya D, Katz L. 2008. Broadly sampled multigene trees of eukaryotes. BMC Evol Biol. 8:14.
-
(2008)
BMC Evol Biol
, vol.8
, pp. 14
-
-
Yoon, H.S.1
Grant, J.2
Tekle, Y.3
Wu, M.4
Chaon, B.5
Cole, J.6
Logsdon, J.7
Patterson, D.8
Bhattacharya, D.9
Katz, L.10
-
107
-
-
0037180558
-
The single, ancient origin of chromist plastids
-
Yoon HS, Hackett JD, Pinto G, Bhattacharya D. 2002. The single, ancient origin of chromist plastids. Proc Natl Acad Sci USA. 99:15507-15512.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 15507-15512
-
-
Yoon, H.S.1
Hackett, J.D.2
Pinto, G.3
Bhattacharya, D.4
-
108
-
-
0002222374
-
Occurrence and distribution of carotenoids in photosynthetic systems
-
Young AJ, Britton G, editors, London: Chapmann & Hall. p
-
Young AJ. 1993. Occurrence and distribution of carotenoids in photosynthetic systems. In: Young AJ, Britton G, editors. Carotenoids in photosynthesis. London: Chapmann & Hall. p. 16-71.
-
(1993)
Carotenoids in photosynthesis
, pp. 16-71
-
-
Young, A.J.1
|