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Volumn 5199 LNCS, Issue , 2008, Pages 589-598

The influence of mutation on protein-ligand docking optimization: A locality analysis

Author keywords

[No Author keywords available]

Indexed keywords

ANNEALING; DOCKING; KETONES; LIGANDS; TRELLIS CODES; ALGORITHMS; PROTEINS;

EID: 56449115907     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-540-87700-4_59     Document Type: Conference Paper
Times cited : (5)

References (15)
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    • Neumaier, A.1
  • 3
    • 84882401450 scopus 로고    scopus 로고
    • Protein-ligand docking with evolutionary algorithms
    • Fogel, G.B, Corne, D.W, Pan, Y, eds, Wiley-IEEE Press, Chichester
    • Thomsen, R.: Protein-ligand docking with evolutionary algorithms. in: Fogel, G.B., Corne, D.W., Pan, Y. (eds.) Computational intelligence in Bioinformatics, pp. 169-195. Wiley-IEEE Press, Chichester (2008)
    • (2008) Computational intelligence in Bioinformatics , pp. 169-195
    • Thomsen, R.1
  • 4
    • 44649114475 scopus 로고    scopus 로고
    • An ant colony optimization approach to flexible protein-ligand docking
    • Korb, O., Stützle, T., Exner, T.: An ant colony optimization approach to flexible protein-ligand docking. Swarm intelligence 1, 115-134 (2007)
    • (2007) Swarm intelligence , vol.1 , pp. 115-134
    • Korb, O.1    Stützle, T.2    Exner, T.3
  • 5
    • 0345293271 scopus 로고    scopus 로고
    • Flexible ligand docking using evolutionary algorithms: Investigating the effects of variation operators and local search hybrids
    • Thomsen, R.: Flexible ligand docking using evolutionary algorithms: investigating the effects of variation operators and local search hybrids. Biosystems 72, 57-73 (2003)
    • (2003) Biosystems , vol.72 , pp. 57-73
    • Thomsen, R.1
  • 8
    • 33745478099 scopus 로고    scopus 로고
    • Empirical analysis of locality heriability and heuristic bias in evolutionary algorithms: A case study for the multidimensional knapsack problem
    • Raidl, G.R., Gottlieb, J.: Empirical analysis of locality heriability and heuristic bias in evolutionary algorithms: A case study for the multidimensional knapsack problem. Evolutionary Computation Journal 13, 441-475 (2005)
    • (2005) Evolutionary Computation Journal , vol.13 , pp. 441-475
    • Raidl, G.R.1    Gottlieb, J.2
  • 11
    • 55349102267 scopus 로고
    • Flexible docking of ligands to receptor sites using genetic algorithms
    • Leiden, The Netherlands, pp, ESCOM Science Publishers
    • Dixon, J.S.: Flexible docking of ligands to receptor sites using genetic algorithms. In: Proc. of the 9th European Symposium on Structure-Activity Relationships, Leiden, The Netherlands, pp. 412-413. ESCOM Science Publishers (1993)
    • (1993) Proc. of the 9th European Symposium on Structure-Activity Relationships , pp. 412-413
    • Dixon, J.S.1
  • 12
    • 40349087133 scopus 로고    scopus 로고
    • Towards the development of universal, fast and highly accurate docking/scoring methods: A long way to go
    • Moitessier, N., Englebienne, P., Lee, D., Lawandi, J., Corbeil, C: Towards the development of universal, fast and highly accurate docking/scoring methods: a long way to go. British Journal of Pharmacology 153, 1-20 (2007)
    • (2007) British Journal of Pharmacology , vol.153 , pp. 1-20
    • Moitessier, N.1    Englebienne, P.2    Lee, D.3    Lawandi, J.4    Corbeil, C.5
  • 13
    • 0000907353 scopus 로고
    • The roles of mutation, inbreeding, crossbreeding and selection in evolution
    • Wright, S.: The roles of mutation, inbreeding, crossbreeding and selection in evolution. In: Proceedings of the VI International Conference on Genetics, vol. 1, pp. 356-366 (1932)
    • (1932) Proceedings of the VI International Conference on Genetics , vol.1 , pp. 356-366
    • Wright, S.1
  • 15
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    • Correlated and uncorrelated fitness landscapes and how to tell the difference
    • Weinberger, E.D.: Correlated and uncorrelated fitness landscapes and how to tell the difference. Biological Cybernetics 63, 325-336 (1990)
    • (1990) Biological Cybernetics , vol.63 , pp. 325-336
    • Weinberger, E.D.1


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