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Volumn 25, Issue 12, 2008, Pages 2669-2680

Balancing selection at a frog antimicrobial peptide locus: Fluctuating immune effector alleles?

Author keywords

Antimicrobial peptide; Balancing selection; Fluctuating selection; Rana blairi; Rana palustris; Rana pipiens

Indexed keywords

POLYPEPTIDE ANTIBIOTIC AGENT;

EID: 56449085957     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/msn208     Document Type: Article
Times cited : (36)

References (53)
  • 1
    • 33747496376 scopus 로고    scopus 로고
    • A genome-wide survey of R gene polymorphisms in Arabidopsis
    • Bakker EG, Toomajian C, Kreitman M, Bergelson J. 2006. A genome-wide survey of R gene polymorphisms in Arabidopsis. Plant Cell. 18:1803-1818.
    • (2006) Plant Cell , vol.18 , pp. 1803-1818
    • Bakker, E.G.1    Toomajian, C.2    Kreitman, M.3    Bergelson, J.4
  • 2
    • 0036679358 scopus 로고    scopus 로고
    • Bamshad MJ, Mummidi S, Gonzalez E, et al. (11 co-authors). 2002. A strong signature of balancing selection in the 59 cis-regulatory region of CCR5. Proc Natl Acad Sci USA. 99:10539-10544.
    • Bamshad MJ, Mummidi S, Gonzalez E, et al. (11 co-authors). 2002. A strong signature of balancing selection in the 59 cis-regulatory region of CCR5. Proc Natl Acad Sci USA. 99:10539-10544.
  • 3
    • 0034736299 scopus 로고    scopus 로고
    • Multiple antimicrobial peptides and peptides related to bradykinin and neuromedin N isolated from skin secretions of the pickerel frog, Rana palustris
    • Basir YJ, Knoop FC, Dulka J, Conlon JM. 2000. Multiple antimicrobial peptides and peptides related to bradykinin and neuromedin N isolated from skin secretions of the pickerel frog, Rana palustris. Biochim Biophys Acta. 1543:95-105.
    • (2000) Biochim Biophys Acta , vol.1543 , pp. 95-105
    • Basir, Y.J.1    Knoop, F.C.2    Dulka, J.3    Conlon, J.M.4
  • 4
    • 0030467524 scopus 로고    scopus 로고
    • Evaluating loci for use in genetic analysis of population structure
    • Beaumont MA, Nichols RA. 1996. Evaluating loci for use in genetic analysis of population structure. Proc R Soc Lond B Biol Sci. 263:1619-1626.
    • (1996) Proc R Soc Lond B Biol Sci , vol.263 , pp. 1619-1626
    • Beaumont, M.A.1    Nichols, R.A.2
  • 5
    • 0034612237 scopus 로고    scopus 로고
    • Convergent adaptive radiations in Madagascan and Asian ranid frogs reveal covariation between larval and adult traits
    • Bossuyt F, Milinkovitch MC. 2000. Convergent adaptive radiations in Madagascan and Asian ranid frogs reveal covariation between larval and adult traits. Proc Natl Acad Sci USA. 97:6585-6590.
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 6585-6590
    • Bossuyt, F.1    Milinkovitch, M.C.2
  • 6
    • 0032793708 scopus 로고    scopus 로고
    • Amphibian declines: An immunological perspective
    • Carey C, Cohen N, Rollins-Smith L. 1999. Amphibian declines: an immunological perspective. Dev Comp Immunol. 23:459-472.
    • (1999) Dev Comp Immunol , vol.23 , pp. 459-472
    • Carey, C.1    Cohen, N.2    Rollins-Smith, L.3
  • 7
    • 33646484211 scopus 로고    scopus 로고
    • Balancing selection and its effects on sequences in nearby genome regions
    • Charlesworth D. 2006. Balancing selection and its effects on sequences in nearby genome regions. PLoS Genet. 2:379-384.
    • (2006) PLoS Genet , vol.2 , pp. 379-384
    • Charlesworth, D.1
  • 8
    • 2942592590 scopus 로고    scopus 로고
    • Inactivation of viruses infecting ectothermic animals by amphibian and piscine antimicrobial peptides
    • Chinchar VG, Bryan L, Silphadaung U, Noga E, Wade D, Rollins-Smith L. 2004. Inactivation of viruses infecting ectothermic animals by amphibian and piscine antimicrobial peptides. Virology. 323:268-275.
    • (2004) Virology , vol.323 , pp. 268-275
    • Chinchar, V.G.1    Bryan, L.2    Silphadaung, U.3    Noga, E.4    Wade, D.5    Rollins-Smith, L.6
  • 9
    • 0030882665 scopus 로고    scopus 로고
    • Molecular population genetics of Drosophila immune system genes
    • Clark AG, Wang L. 1997. Molecular population genetics of Drosophila immune system genes. Genetics. 147:713-724.
    • (1997) Genetics , vol.147 , pp. 713-724
    • Clark, A.G.1    Wang, L.2
  • 10
    • 1242306544 scopus 로고    scopus 로고
    • Antimicrobial peptides from ranid frogs: Taxonomic and phylogenetic markers and a potential source of new therapeutic agents
    • Conlon JM, Kolodziejek J, Nowotny N. 2004. Antimicrobial peptides from ranid frogs: taxonomic and phylogenetic markers and a potential source of new therapeutic agents. Biochim Biophys Acta. 1696:1-14.
    • (2004) Biochim Biophys Acta , vol.1696 , pp. 1-14
    • Conlon, J.M.1    Kolodziejek, J.2    Nowotny, N.3
  • 11
    • 0037337826 scopus 로고    scopus 로고
    • Infectious disease and amphibian population declines
    • Daszak P, Cunningham AA, Hyatt AD. 2003. Infectious disease and amphibian population declines. Divers Distrib. 9:141-150.
    • (2003) Divers Distrib , vol.9 , pp. 141-150
    • Daszak, P.1    Cunningham, A.A.2    Hyatt, A.D.3
  • 12
    • 34948856892 scopus 로고    scopus 로고
    • Cytonuclear discordance across a leopard frog contact zone
    • Di Candia MR, Routman EJ. 2007. Cytonuclear discordance across a leopard frog contact zone. Mol Phylogenet Evol. 45:564-575.
    • (2007) Mol Phylogenet Evol , vol.45 , pp. 564-575
    • Di Candia, M.R.1    Routman, E.J.2
  • 13
    • 56449112881 scopus 로고    scopus 로고
    • Felsenstein J. 1989. PHYLIP, phylogeny inference package version 3.2, Cladistics. 5:164-166
    • Felsenstein J. 1989. PHYLIP - phylogeny inference package (version 3.2). Cladistics. 5:164-166.
  • 14
    • 33745748862 scopus 로고    scopus 로고
    • Frost DR, Grant T, Faivovich J, et al. (19 co-authors). 2006. The amphibian tree of life. Bull Am Mus Nat Hist. 297:1-370.
    • Frost DR, Grant T, Faivovich J, et al. (19 co-authors). 2006. The amphibian tree of life. Bull Am Mus Nat Hist. 297:1-370.
  • 15
    • 0042785584 scopus 로고    scopus 로고
    • Perspective: Detecting adaptive molecular polymorphism: lessons from the MHC
    • Garrigan D, Hedrick PW. 2003. Perspective: detecting adaptive molecular polymorphism: lessons from the MHC. Evolution. 57:1707-1722.
    • (2003) Evolution , vol.57 , pp. 1707-1722
    • Garrigan, D.1    Hedrick, P.W.2
  • 16
    • 0033973411 scopus 로고    scopus 로고
    • Peptides with antimicrobial activity from four different families isolated from the skins of the North American frogs Rana luteiventris, Rana berlandieri, and Rana pipiens
    • Goraya J, Wang Y, Li Z, O'Flaherty M, Knoop FC, Platz JE, Conlon JM. 2000. Peptides with antimicrobial activity from four different families isolated from the skins of the North American frogs Rana luteiventris, Rana berlandieri, and Rana pipiens. Eur J Biochem. 267:894-900.
    • (2000) Eur J Biochem , vol.267 , pp. 894-900
    • Goraya, J.1    Wang, Y.2    Li, Z.3    O'Flaherty, M.4    Knoop, F.C.5    Platz, J.E.6    Conlon, J.M.7
  • 17
    • 85007320774 scopus 로고    scopus 로고
    • Goudet J. 1995. FSTAT version 1.2, a computer program to calculate F-statistics. J Hered. 86:485-486
    • Goudet J. 1995. FSTAT (version 1.2): a computer program to calculate F-statistics. J Hered. 86:485-486.
  • 18
    • 0036411698 scopus 로고    scopus 로고
    • Epizootiology of sixty-four amphibian morbidity and mortality events in the USA, 1996-2001
    • Green DE, Converse KA, Schrader AK. 2002. Epizootiology of sixty-four amphibian morbidity and mortality events in the USA, 1996-2001. Ann N Y Acad Sci. 969:323-339.
    • (2002) Ann N Y Acad Sci , vol.969 , pp. 323-339
    • Green, D.E.1    Converse, K.A.2    Schrader, A.K.3
  • 19
    • 28944447640 scopus 로고    scopus 로고
    • Five amphibian mortality events associated with ranavirus infection in south central Ontario, Canada
    • Greer AL, Berrill M, Wilson PJ. 2005. Five amphibian mortality events associated with ranavirus infection in south central Ontario, Canada. Dis Aquat Org. 67:9-14.
    • (2005) Dis Aquat Org , vol.67 , pp. 9-14
    • Greer, A.L.1    Berrill, M.2    Wilson, P.J.3
  • 20
    • 0035496012 scopus 로고    scopus 로고
    • Cationic peptides: Effectors in innate immunity and novel antimicrobials
    • Hancock REW. 2001. Cationic peptides: effectors in innate immunity and novel antimicrobials. Lancet Infect Dis. 1:156-164.
    • (2001) Lancet Infect Dis , vol.1 , pp. 156-164
    • Hancock, R.E.W.1
  • 21
    • 0036807185 scopus 로고    scopus 로고
    • Pathogen resistance and genetic variation at MHC loci
    • Hedrick PW. 2002. Pathogen resistance and genetic variation at MHC loci. Evolution. 56:1902-1908.
    • (2002) Evolution , vol.56 , pp. 1902-1908
    • Hedrick, P.W.1
  • 22
    • 0942273212 scopus 로고    scopus 로고
    • Evolutionary history of the northern leopard frog: Reconstruction of phylogeny, phylogeography, and historical changes in population demography from mitochondrial DNA
    • Hoffman EA, Blouin MS. 2004. Evolutionary history of the northern leopard frog: reconstruction of phylogeny, phylogeography, and historical changes in population demography from mitochondrial DNA. Evolution. 58:145-159.
    • (2004) Evolution , vol.58 , pp. 145-159
    • Hoffman, E.A.1    Blouin, M.S.2
  • 23
    • 33745899651 scopus 로고    scopus 로고
    • An analysis of selection on a colour polymorphism in the northern leopard frog
    • Hoffman EA, Schueler FW, Jones AG, Blouin MS. 2006. An analysis of selection on a colour polymorphism in the northern leopard frog. Mol Ecol. 15:2627-2641.
    • (2006) Mol Ecol , vol.15 , pp. 2627-2641
    • Hoffman, E.A.1    Schueler, F.W.2    Jones, A.G.3    Blouin, M.S.4
  • 24
    • 43149115581 scopus 로고    scopus 로고
    • Directional and balancing selection in human beta-defensins
    • Hollox EJ, Armour JAL. 2008. Directional and balancing selection in human beta-defensins. BMC Evol Biol. 8:113.
    • (2008) BMC Evol Biol , vol.8 , pp. 113
    • Hollox, E.J.1    Armour, J.A.L.2
  • 25
    • 0033050690 scopus 로고    scopus 로고
    • The effect of selection on the amount of nucleotide variation within and between allelic classes
    • Camb
    • Innan H, Tajima F. 1999. The effect of selection on the amount of nucleotide variation within and between allelic classes. Genet Res [Camb]. 73:15-28.
    • (1999) Genet Res , vol.73 , pp. 15-28
    • Innan, H.1    Tajima, F.2
  • 26
    • 37349076498 scopus 로고    scopus 로고
    • Spatially and temporally fluctuating selection at non-MHC immune genes: Evidence from TAP polymorphism in populations of brown trout (Salmo trutta, L.)
    • Jensen LF, Hansen MM, Mensberg K-LD, Loeschcke V. 2008. Spatially and temporally fluctuating selection at non-MHC immune genes: evidence from TAP polymorphism in populations of brown trout (Salmo trutta, L.). Heredity. 100:79-91.
    • (2008) Heredity , vol.100 , pp. 79-91
    • Jensen, L.F.1    Hansen, M.M.2    Mensberg, K.-L.D.3    Loeschcke, V.4
  • 27
    • 0030873114 scopus 로고    scopus 로고
    • A test of neutrality based on interlocus associations
    • Kelly JK. 1997. A test of neutrality based on interlocus associations. Genetics. 146:1179-1206.
    • (1997) Genetics , vol.146 , pp. 1179-1206
    • Kelly, J.K.1
  • 28
    • 0036139211 scopus 로고    scopus 로고
    • MEGA2: Molecular evolutionary genetics analysis software
    • Kumar S, Tamura K, Jakobsen IB, Nei M. 2001. MEGA2: molecular evolutionary genetics analysis software. Bioinformatics. 17:1244-1245.
    • (2001) Bioinformatics , vol.17 , pp. 1244-1245
    • Kumar, S.1    Tamura, K.2    Jakobsen, I.B.3    Nei, M.4
  • 29
    • 0038247875 scopus 로고    scopus 로고
    • Molecular population genetics of inducible antibacterial peptide genes in Drosophila melanogaster
    • Lazzaro BP, Clark AG. 2003. Molecular population genetics of inducible antibacterial peptide genes in Drosophila melanogaster. Mol Biol Evol. 20:914-923.
    • (2003) Mol Biol Evol , vol.20 , pp. 914-923
    • Lazzaro, B.P.1    Clark, A.G.2
  • 30
    • 1642416091 scopus 로고    scopus 로고
    • Genetic basis of natural variation in D. melanogaster antibacterial immunity
    • Lazzaro BP, Sceurman BK, Clark AG. 2004. Genetic basis of natural variation in D. melanogaster antibacterial immunity. Science. 303:1873-1876.
    • (2004) Science , vol.303 , pp. 1873-1876
    • Lazzaro, B.P.1    Sceurman, B.K.2    Clark, A.G.3
  • 32
    • 44649102625 scopus 로고    scopus 로고
    • Molecular diversity and evolution of myticin-C antimicrobial peptide variants in the Mediterranean mussel, Mytilus galloprovincialis
    • Pahdi A, Verghese B. 2008. Molecular diversity and evolution of myticin-C antimicrobial peptide variants in the Mediterranean mussel, Mytilus galloprovincialis. Peptides. 29:1094-1101.
    • (2008) Peptides , vol.29 , pp. 1094-1101
    • Pahdi, A.1    Verghese, B.2
  • 33
    • 33644998297 scopus 로고    scopus 로고
    • The evolutionary ecology of the major histocompatibility complex
    • Piertney SB, Oliver MK. 2006. The evolutionary ecology of the major histocompatibility complex. Heredity. 96:7-21.
    • (2006) Heredity , vol.96 , pp. 7-21
    • Piertney, S.B.1    Oliver, M.K.2
  • 34
    • 0021038163 scopus 로고
    • Estimation of the coancestry coefficient: Basis for a short term genetic distance
    • Reynolds J, Weir BS, Cockerham CC. 1983. Estimation of the coancestry coefficient: basis for a short term genetic distance. Genetics. 105:767-779.
    • (1983) Genetics , vol.105 , pp. 767-779
    • Reynolds, J.1    Weir, B.S.2    Cockerham, C.C.3
  • 35
    • 0034848435 scopus 로고    scopus 로고
    • Can microsatellites be used to infer phylogenies? Evidence from population affinities of the western Canary Island lizard (Gallotia galloti)
    • Richard M, Thorpe RS. 2001. Can microsatellites be used to infer phylogenies? Evidence from population affinities of the western Canary Island lizard (Gallotia galloti). Mol Phylogenet Evol. 20:351-360.
    • (2001) Mol Phylogenet Evol , vol.20 , pp. 351-360
    • Richard, M.1    Thorpe, R.S.2
  • 36
    • 15244355765 scopus 로고    scopus 로고
    • Antimicrobial peptide defenses against chytridiomycosis, an emerging infectious disease of amphibian populations
    • Rollins-Smith LA, Conlon JM. 2005. Antimicrobial peptide defenses against chytridiomycosis, an emerging infectious disease of amphibian populations. Dev Comp Immunol. 29:589-598.
    • (2005) Dev Comp Immunol , vol.29 , pp. 589-598
    • Rollins-Smith, L.A.1    Conlon, J.M.2
  • 37
  • 39
    • 0024280111 scopus 로고
    • Dynamics of some simple host-parasite models with more than two genotypes in each species
    • Seger J. 1988. Dynamics of some simple host-parasite models with more than two genotypes in each species. Philos Trans R Soc Lond B Biol Sci. 319:541-555.
    • (1988) Philos Trans R Soc Lond B Biol Sci , vol.319 , pp. 541-555
    • Seger, J.1
  • 40
    • 0033549777 scopus 로고    scopus 로고
    • Dynamics of disease resistance polymorphism at the Rpm1 locus of Arabidopsis
    • Stahl EA, Dwyer G, Mauricio R, Kreitman M, Bergelson J. 1999. Dynamics of disease resistance polymorphism at the Rpm1 locus of Arabidopsis. Nature. 400:667-671.
    • (1999) Nature , vol.400 , pp. 667-671
    • Stahl, E.A.1    Dwyer, G.2    Mauricio, R.3    Kreitman, M.4    Bergelson, J.5
  • 41
    • 35248898086 scopus 로고    scopus 로고
    • Complex signatures of selection and gene conversion in the duplicated globin genes of house mice
    • Storz JF, Baze M, Waite JL, Hoffmann FG, Opazo JC, Hayes JP. 2007. Complex signatures of selection and gene conversion in the duplicated globin genes of house mice. Genetics. 177:481-500.
    • (2007) Genetics , vol.177 , pp. 481-500
    • Storz, J.F.1    Baze, M.2    Waite, J.L.3    Hoffmann, F.G.4    Opazo, J.C.5    Hayes, J.P.6
  • 42
    • 0033578308 scopus 로고    scopus 로고
    • Fifty-million-year-old polymorphism at an immunoglobulin variable region gene locus in the rabbit evolutionary lineage
    • Su C, Nei M. 1999. Fifty-million-year-old polymorphism at an immunoglobulin variable region gene locus in the rabbit evolutionary lineage. Proc Natl Acad Sci USA. 96: 9710-9715.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 9710-9715
    • Su, C.1    Nei, M.2
  • 43
    • 56449093557 scopus 로고    scopus 로고
    • Swofford DL. 2002. PAUP*. Phylogenetic analysis using parsimony (*and other methods) version 4.0b10. Sunderland MA, Sinauer Associates
    • Swofford DL. 2002. PAUP*. Phylogenetic analysis using parsimony (*and other methods) version 4.0b10. Sunderland (MA): Sinauer Associates.
  • 44
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima F. 1989. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics. 123:585-595.
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 45
    • 0025255468 scopus 로고
    • Allelic genealogy under overdominant and frequency-dependent selection and polymorphism of major histocompatibility complex loci
    • Takahata N, Nei M. 1990. Allelic genealogy under overdominant and frequency-dependent selection and polymorphism of major histocompatibility complex loci. Genetics. 124: 967-978.
    • (1990) Genetics , vol.124 , pp. 967-978
    • Takahata, N.1    Nei, M.2
  • 46
    • 26244445179 scopus 로고    scopus 로고
    • Enhanced synonymous site divergence in positively selected vertebrate antimicrobial peptide genes
    • Tennessen JA. 2005a. Enhanced synonymous site divergence in positively selected vertebrate antimicrobial peptide genes. J Mol Evol. 61:445-455.
    • (2005) J Mol Evol , vol.61 , pp. 445-455
    • Tennessen, J.A.1
  • 47
    • 28444479815 scopus 로고    scopus 로고
    • Molecular evolution of animal antimicrobial peptides: Widespread moderate positive selection
    • Tennessen JA. 2005b. Molecular evolution of animal antimicrobial peptides: widespread moderate positive selection. J Evol Biol. 18:1387-1394.
    • (2005) J Evol Biol , vol.18 , pp. 1387-1394
    • Tennessen, J.A.1
  • 48
    • 36148990699 scopus 로고    scopus 로고
    • Selection for antimicrobial peptide diversity in frogs leads to gene duplication and low allelic variation
    • Tennessen JA, Blouin MS. 2007. Selection for antimicrobial peptide diversity in frogs leads to gene duplication and low allelic variation. J Mol Evol. 65:605-615.
    • (2007) J Mol Evol , vol.65 , pp. 605-615
    • Tennessen, J.A.1    Blouin, M.S.2
  • 49
    • 0037653656 scopus 로고    scopus 로고
    • Fitness costs of R-gene-mediated resistance in Arabidopsis thaliana
    • Tian D, Traw MB, Chen JQ, Kreitman M, Bergelson J. 2003. Fitness costs of R-gene-mediated resistance in Arabidopsis thaliana. Nature. 423:74-77.
    • (2003) Nature , vol.423 , pp. 74-77
    • Tian, D.1    Traw, M.B.2    Chen, J.Q.3    Kreitman, M.4    Bergelson, J.5
  • 50
    • 3843128155 scopus 로고    scopus 로고
    • Tiffin P, Hacker R, Gaut BS. 2004. Population genetic evidence for rapid changes in intraspecific diversity and allelic cycling of a specialist defense gene in Zea. Genetics. 168:425-434.
    • Tiffin P, Hacker R, Gaut BS. 2004. Population genetic evidence for rapid changes in intraspecific diversity and allelic cycling of a specialist defense gene in Zea. Genetics. 168:425-434.
  • 51
    • 33751073183 scopus 로고    scopus 로고
    • Molecular evolution of plant immune system genes
    • Tiffin P, Moeller DA. 2006. Molecular evolution of plant immune system genes. Trends Genet. 22:662-670.
    • (2006) Trends Genet , vol.22 , pp. 662-670
    • Tiffin, P.1    Moeller, D.A.2
  • 52
    • 29144465485 scopus 로고    scopus 로고
    • Population trends associated with skin peptide defenses against chytridiomycosis in Australian frogs
    • Woodhams DC, Rollins-Smith LA, Carey C, Reinert L, Tyler MJ, Alford RA. 2006. Population trends associated with skin peptide defenses against chytridiomycosis in Australian frogs. Oecologia. 146:531-540.
    • (2006) Oecologia , vol.146 , pp. 531-540
    • Woodhams, D.C.1    Rollins-Smith, L.A.2    Carey, C.3    Reinert, L.4    Tyler, M.J.5    Alford, R.A.6
  • 53
    • 33748265896 scopus 로고    scopus 로고
    • Predicted disease susceptibility in a Panamanian amphibian assemblage based on skin peptide defenses
    • Woodhams DC, Voyles J, Lips KR, Carey C, Rollins-Smith LA. 2006. Predicted disease susceptibility in a Panamanian amphibian assemblage based on skin peptide defenses. J Wildl Dis. 42:207-218.
    • (2006) J Wildl Dis , vol.42 , pp. 207-218
    • Woodhams, D.C.1    Voyles, J.2    Lips, K.R.3    Carey, C.4    Rollins-Smith, L.A.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.