Sensitivity of phage lambda upon variations of the gibbs free energy

Israel Journal of Chemistry

Volumn 44, Issue 1-3, 2004, Pages 309-315

  Bakk, Audun ^a   Metzler, Ralf ^a   Sneppen, Kim ^a  

^a NORDITA   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN CI; PROTEIN CRO; REGULATOR PROTEIN; REPRESSOR PROTEIN; RNA POLYMERASE; UNCLASSIFIED DRUG;

BACTERIOPHAGE LAMBDA; CONFERENCE PAPER; DNA BINDING; ERROR; MATHEMATICAL COMPUTING; NONHUMAN; PROMOTER REGION; PROTEIN DNA BINDING; RANDOMIZATION; WILD TYPE;

EID: 5644259236     PISSN: 00212148     EISSN: None     Source Type: Journal    
DOI: 10.1560/GB3T-2B64-PFWK-1Q96     Document Type: Conference Paper

References (22)

1. Rao, C.V.; Arkin, A.P. Annu. Rev. Biomed. Eng. 2001, 3, 391-419.
2. Snustad, D.P.; Simmons, M.J. Principles of Genetics, 2nd ed.; Wiley: New York, 2000.
3. Alberts, B.; Bray, D.; Lewis, J.; Raff, M.; Roberts, K.; Watson, J.D. Molecular Biology of the Cell, 3rd ed.; Garland: New York, 1994; Chapter 9.
4. Ptashne, M.; Gann, A. Genes and Signals; Cold Spring Harbor Laboratory Press: Plainview, NY, 2002.
5. Ptashne, M. A Genetic Switch: Phage λ and Higher Organisms, 2nd ed.; Cell Press and Blackwell: Cambridge, MA, 1992.
6. Ackers, G.K.; Johnson, A.D.; Shea, M.A. Proc. Natl. Acad. Sci. U.S.A. 1982, 79, 1129-1133.
7. Shea, M.A.; Ackers, G.K. J. Mol. Biol 1985, 181, 211-230.
8. Aurell, E.; Brown, S.; Johanson, J.; Sneppen, K. Phys. Rev. E. 2002, 65, 051914-1-051914-9.
9. Hill, T.L. An Introduction to Statistical Thermodynamics: Addison-Wesley: London, 1960.
10. Koblan, K.S.; Ackers, G.K. Biochemistry 1992, 31, 57-65.
11. Darling, P.J.; Holt, Jo M.; Ackers, G.K. J. Mol. Biol. 2000, 302, 625-638.
12. Kao-Huang, Y.; Revzin, A.; Butler, A.P.; O'Conner, P.; Noble, D.W.; von Hippel, P.H. Proc. Natl. Acad. Sci. U.S.A. 1977, 74, 4228-4232.
13. Koblan, K.S.; Ackers. G.K. Biochemistry 1991, 30, 7817-7821.
14. Darling, P.J.; Holt, Jo M.; Ackers, G.K. Biochemistry 2000, 39, 11500-11507.
15. Ptashne, M.; Jeffrey, A.; Johnson, A.D.; Maurer, R.; Meyer, B.J.; Pabo, C.O.; Roberts, T.M.; Sauer, R.T. Cell 1980, 19, 1-11.
16. McClure, W.R. Proc. Natl. Acad. Sci. U.S.A. 1980, 77, 5634-5638.
17. Bakk, A.; Metzler, R.; Sneppen, K. Biophys. J. 2004, 86, 58-66.
18. Bailone, A.; Levine, A.; Devoret, R. J. Mol. Biol. 1979, 131, 553-572.
19. Little, J.W.; Shepley, D.P.; Wert, D.W. EMBO J. 1999, 18, 4299-4307.
20. Pakula, A.A.; Young, V.B.; Sauer, R.T. Proc. Natl. Acad. Sci. U.S.A. 1986, 83, 8829-8833.
21. Metzler, R. Phys. Rev. Lett. 2001, 87, 068103-1-068103-4.
22. Sasai, M.; Wolynes, P.G. Proc. Natl. Acad. Sci. U.S.A. 2003, 100, 2374-2379.