Automatic factorization of biological signals by using boltzmann non-negative matrix factorization

Proceedings of the International Joint Conference on Neural Networks

Volumn , Issue , 2008, Pages 1122-1128

  Watanabe, Kenji ^a   Hidaka, Akinori ^a   Kurita, Takio ^b  

^a UNIVERSITY OF TSUKUBA   (Japan)

^b NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY AIST   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BLIND SOURCE SEPARATION; BOLTZMANN EQUATION; FACTORIZATION; FLUORESCENCE SPECTROSCOPY; LIGHT MEASUREMENT; MOLECULAR SPECTROSCOPY; NEURAL NETWORKS; PROBABILITY; PROBABILITY DISTRIBUTIONS; TIME SERIES ANALYSIS;

BIOLOGICAL SIGNALS; BOLTZMANN; BOLTZMANN DISTRIBUTIONS; ENERGY DISTRIBUTIONS; ENERGY DYNAMICS; FACTORIZATION METHODS; FLUORESCENCE CORRELATION SPECTROSCOPIES; MEASURED SIGNALS; MODEL FUNCTIONS; MODEL SELECTION METHODS; NON-NEGATIVE MATRIX FACTORIZATIONS; NUMBER OF COMPONENTS; PROBABILITY DENSITIES; TIME SERIES SIGNALS;

PROBABILITY DENSITY FUNCTION;

EID: 56349141233     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/IJCNN.2008.4633940     Document Type: Conference Paper

References (14)

1. L. R. Hochberg, M. D. Serruya, G. M. Friehs, J. A. Mukand, M. Saleh, A. H. Captan, A. Branner, D. Chen, R. D. Penn, and J. P. Donoghue, "Neuronal ensemble control of prosthetic devices by a human with tetraplegia," Nature, Vol. 442, pp. 164-171, Jul. 2006
2. K. Watanabe, K. Saito, M. Kinjo, T. Matsuda, M. Tamura, S. Kon, T. Miyazaki, and T. Uede, "Molecular dynamics of STAT3 on IL-6 signaling pathway in living cells," Biochem. Biophys. Res. Commun., Vol. 324, pp. 1264-1273, 2004
3. A. Kitamura, H. Kubota, C.-G. Pack, G. Matsumoto, S. Hirayama, Y. Takahashi, H. Kimura, M. Kinjo, R. I. Morimoto, and K. Nagata, "Cytosolic chaperonin prevents polyglutamine toxicity with altering the aggregation, state," Nature Cell. Biol., Vol. 8, No. 10, pp. 1163-1170, Oct. 2006
4. M. Ehrenberg, and R. Rigler, "ROTATIONAL BROWNIAN MOTION AND FLUORESCENCE INTENSITY FLUCTUATIONS," Chem. Phys., 4 (1974) 390-401
5. E. L. Elson, and D. Magde, "Fluorescence correlation spectroscopy. I. Conceptual basis and theory," Biopolymers, Vol. 13, pp. 1-27, Feb. 2004
6. D. E. Koppel, "Statistical accuracy in fluorescence correlation spectroscopy,". Phys. Rev. A, Vol. 10, No. 6, pp. 1938-1945, Dec. 1974
7. P. Comon, "Independent component analysis, A new concept?," Signal Processing, vol. 36, pp. 287-314, 1994
8. A. Delorme, T. Sejnowski, and S. Makeig, "Enhanced detection, of artifacts in EEG data using higher-order statistics and independent component analysis," Neurolmage, vol. 34, pp. 1443-1449, 2007
9. D. D. Lee, and H. S. Seung, "Learning the parts of objects by non-negative matrix factorization," Nature, vol. 401, pp. 788-791, Oct. 1999
10. D. D. Lee, and H. S. Seung, "Algorithms for Non-negative Matrix Factorization," Adv. Neural Info. Proc. Syst., vol. 13, pp. 556-562, 2001
11. K. Watanabe, and T. Kurita, "Automatic Factorization of Biological Signals Measured by Fluorescence Correlation. Spectroscopy using Non-negative Matrix Factorization," ICONIP 2007 14th Int. Conf. on Neural Information Processing, W.MB-3, accepted.
12. J. Shao, "Linear Model Selection by Cross-Validation," Journal of the American Statistical Association, Vol. 88, No. 422, pp. 486-494, Jun. 1993
13. R. Rao, R. Langoju, M. Gösch, P. Rigler, A. Serov, and T. Lasser, "Stochastic Approach, to Data Analysis in Fluorescence Correlation Spectroscopy," J. Phys. Chem. A, Vol. 110, No. 37, pp. 10674-10682, 2006
14. 2+-dependent conformational change of RNA studied by fluorescence correlation and FRET on immobilized single molecules," Proc. Natl. Acad. Sci. USA, Vol. 99, No. 7, pp. 4284-4289, Apr. 2002