A novel chimeric low-molecular-weight glutenin subunit gene from the wild relatives of wheat Aegilops kotschyi and Ae. juvenalis: Evolution at the Glu-3 loci

Genetics

Volumn 180, Issue 1, 2008, Pages 93-101

  Li, Xiaohui ^a   Ma, Wujun ^b   Gao, Liyan ^a   Zhang, Yanzhen ^a   Wang, Aili ^a,b   Ji, Kangmin ^a   Wang, Ke ^a   Appels, Rudi ^b   Yan, Yueming ^a  

^a CAPITAL NORMAL UNIVERSITY   (China)

^b MURDOCH UNIVERSITY   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

GLUTENIN; GLUTEN; VEGETABLE PROTEIN;

AMINO ACID SUBSTITUTION; ARTICLE; CHIMERA; CONTROLLED STUDY; GENE ISOLATION; GENE LOCUS; GENETIC VARIABILITY; GLUTENIN I GENE; GLUTENIN M GENE; HEXAPLOIDY; HOMOLOGOUS RECOMBINATION; MOLECULAR EVOLUTION; MOLECULAR WEIGHT; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLANT GENE; PLANT GENETICS; PLANT GENOME; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; SINGLE NUCLEOTIDE POLYMORPHISM; WHEAT; AMINO ACID SEQUENCE; BIOLOGICAL MODEL; CHEMISTRY; GENE; GENE EXPRESSION REGULATION; GENETIC RECOMBINATION; GENETICS; GENOME; MOLECULAR GENETICS; SPECIES DIFFERENCE;

AEGILOPS KOTSCHYI; AEGILOPS NEGLECTA; TRITICUM AESTIVUM;

AMINO ACID SEQUENCE; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; GENOME, PLANT; GLUTEN; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLANT PROTEINS; POLYMORPHISM, SINGLE NUCLEOTIDE; RECOMBINATION, GENETIC; SEQUENCE HOMOLOGY, AMINO ACID; SPECIES SPECIFICITY; TRITICUM;

EID: 56049122711     PISSN: 00166731     EISSN: 00166731     Source Type: Journal    
DOI: 10.1534/genetics.108.092403     Document Type: Article

References (52)

1. ALLABY, R. G., M. BANERJEE and T. A. BROWN, 1999 Evolution of the high molecular weight glutenin loci of the A, B, D, and R genomes of wheat. Genome 42: 296-307.
2. ALLGOOD, N. D., and T. J. SILHAVY, 1988 Illegitimate recombination in bacteria, pp. 309-330 in Genetic Recombination, edited by R. KUCHERLAPATI and G. R. SIMTH. American Society for Microbiology, Washington, DC.
3. AN, X., Y. YAN, Y. XIAO, Q. LI, S. L. K. HSAM et al., 2005 Genetic diversity of European spelt wheat (Triticum spelta L.) revealed by glutenin subunit variations at Glu-1 and Glu-3 loci. Euphytica 146: 193-201.
4. AN, X., Q. ZHANG, Y. YAN, Q. LI, Y. ZHANG et al., 2006 Cloning and molecular characterization of three novel LMW-i glutenin subunit genes from cultivatied einkorn (Triticum monococcum L.). Theor. Appl. Genet. 113: 383-395.
5. ANDERSON, O. D., and F. C. GREENE, 1989 The characterization and comparative analysis of high-molecular-weight glutenin genes from genomes A and B of a hexaploid bread wheat. Theor. Appl. Genet. 77: 689-700.
6. ARGUELLO, J. R., Y. CHEN, S. YANG, W. WANG and M. LONG, 2006 Origination of an X-Linked testes chimeric gene by illegitimate recombination in Drosophila. PLoS Genet. 2: 745-754.
7. CASSIDY, B. G., J. DVORAK and O. D. ANDERSON, 1998 The wheat low-molecular-weight glutenin genes: characterization of six new genes and progress in understanding gene family structure. Theor. Appl. Genet. 96: 743-750.
8. CLOUTIER, S., C. RAMPITSCH, G. A. PENNER and O. M. LUKOW, 2001 Cloning and expression of a LMW-i glutenin Gene. J. Cereal Sci. 33: 143-154.
9. D'OVIDIO, R., and S. MASCI, 2004 The low-molecular-weight glutenin subunits of wheat gluten. J. Cereal Sci. 39: 321-339.
10. D'OVIDIO, R., D. LAFIANDRA and E. PORCEDDU, 1996 Identification and molecular characterization of a large insertion within the repetitive domain of a high-molecular-weight glutenin subunit gene from hexaploid wheat. Theor. Appl. Genet. 93: 1048-1053.
11. D'OVIDIO, R., C. MARCHITELLI, C. L. ERCOLI and E. PORCEDDU, 1999 Sequence similarity between allelic Glu-B3 genes related to quality properties of durum wheat. Theor. Appl. Genet. 98: 455-461.
12. DEVOS, K. M., J. K. M. BROWN and J. F. BENNETZEN, 2002 Genome size reduction through illegitimate recombination counteracts genome expansion in Arabidopsis. Genome Res. 12: 1075-1079.
13. DUBCOVSKY, J., M. ECHAIDE, S. GIANCOLA, M. ROUSSET, M. C. LUO et al., 1997 Seed-storage-loci in RFLP maps of diploid, tetraploid, and hexaploid wheat. Theor. Appl. Genet. 95: 1169-1180.
14. GAUT, B. S., B. R. MORTON, B. C. MCC AIG and M. T. CLEGG, 1996 Substitution rate comparisons between grasses and palms: synonymous rate differences at the nuclear gene Adh parallel rate differences at the plastid gene rbcL. Proc. Natl. Acad. Sci. USA 93: 10274-10279.
15. r glutenin subunits in Triticum tauschii. J. Cereal Sci. 35: 277-286.
16. GUPTA, R. B., and K. W. SHEPHERD, 1990 Two-step one-dimensional SDS-PAGE analysis of LMW subunits of glutenin. 1. Variation and genetic control of the subunits in hexaploid wheats. Theor. Appl. Genet. 80: 65-74.
17. HARBERD, N. P., D. BARTELS and R. D. THOMPSON, 1985 Analysis of the gliadin moltigene loci in bread wheat using nullisomic-tetrasomic lines. Mol. Gen. Genet. 198: 234-242.
18. HEDGCOTH, C., A. M. EL-SHEHAWI, P. WEI, M. CLARKSON and D. TAMALIS, 2002 A chimeric open reading frame associated with cytoplasmic male sterility in alloplasmic wheat with Triticum timopheevi mitochondria is present in several Triticum and Aegilops species, barley, and rye. Curr. Genet. 41: 357-365.
19. IKEDA, T. M., T. NAGAMINE, H. FUKUPKA and H. YANO, 2002 Identification of new low-molecular-weight glutenin subunit genes in wheat. Theor. Appl. Genet. 104: 680-687.
20. IKEDA, T..M., E. ARAKI, Y. FUJITA and H. YANO, 2006 Characterization of low-molecular- weight glutenin subunit genes and their protein products in common wheats. Theor. Appl. Genet. 112: 327-334.
21. JOHAL, J., M. C. GIANIBELLI, S. RAHMAN, M. K. MORELL and K. R. GALE, 2004 Characterization of low-molecular-weight glutenin genes in Aegilops tauschii. Theor. Appl. Genet. 109: 1028-1040.
22. KATJU, V., and M. LYNCH, 2003 The structure and early evolution of recently arisen gene duplicates in the Caenorhabditis elegans genome. Genetics 165: 1793-1803.
23. KUMAR, S., K. TAMURA and M. NEI, 2004 MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief. Bioinformatics 5: 150-163.
24. LEE, Y. K., M. CIAFFI, R. APPELS and M. K. MOREL, 1999 The low-molecular-weight glutenin subunit proteins of primitive wheats. II. The genes from A-genome species. Theor. Appl. Genet. 98: 126-134.
25. LI, Q., H. YE, Q. YANG and S. JIANG, 2003 Relationship between several biochemical indexes and resistance of Aegilops species to oat-bird cherry aphids (Homoptera: Aphididae). Sci. Agric. Sin. 2: 994-999.
26. LI, Q., Y. YAN, A. WANG, X. AN, Y. ZHANG et al., 2006 Detection of HMW glutenin subunit variations among 205 cultivated emmer accessions (Triticum turgidum ssp. dicoccum). Plant Breed. 125: 120-124.
27. LI, Q., X. AN, Y. XIAO, Q. ZANG, Y. ZANG et al., 2007 Cloning and molecular characterization of LMW glutenin subunit genes in Triticum dicoccoides. Sci. Agric. Sin. 40: 457-463.
28. LI, W., Y. WAN, Z. LIU, K. LIU, X. LIU et al., 2004 Molecular characterization of HMWglutenin subunit allele 1Bx14: further insights into the evolution of Glu-B1-1 alleles in wheat and related species. Theor. Appl. Genet. 109: 1093-1104.
29. LI, X., Y. ZHANG, L. GAO, A. WANG, K. JI et al., 2007 Molecular cloning, heterologous expression and phylogenetic analysis of a novel y-type HMW glutenin subunit gene from G genome of Triticum timopheevi. Genome 50: 1130-1140.
30. LI, X., A. WANG, Y. XIAO, Y. YAN, Z. HE et al., 2008 Cloning and characterization of a novel low molecular weight glutenin subunit gene at the Glu-A3 locus from wild emmer wheat (Triticum turgidum L. var. dicoccoides). Euphytica 159: 181-190.
31. LI, Z., X. ZHANG, H. ZHANG, S. CAO, D. WANG et al., 2007 Isolation and characterization of a novel variant of HMW glutenin subunit gene from the St genome of Pseudoroegneria stipifolia. J. Cereal Sci. 47: 429-437.
32. LUMBRERAS, V., M. M. ALBÀ, T. KLEINOW, C. KONCZ and M. PAGÈS, 2001 Domain fusion between SNF1-related kinase subunits during plant evolution. EMBO Rep. 2: 55-60.
33. MA, W., R. APPELS, F. BEKES, O. LARROQUE, M. K. MORELL et al., 2005 Genetic characterisation of dough rheological properties in a wheat doubled haploid population: additive genetic effects and epistatic interactions. Theor. Appl. Genet. 111: 410-422.
34. NAGY, I. J., I. TAKÀCS, A. JUHÁ SZ, L. TAMÁS and Z. BEDÖ, 2005 Identification of a new class of recombinant prolamin genes in wheat. Genome 48: 840-847.
35. PATTHY, L., 1999 Genome evolution and the evolution of exonshuffling: a review. Gene 238: 103-114.
36. PAYNE, P. I., M. A. NIGHTINGALE, A. F. KRATTIGER and L. M. HOLT, 1987 The relationship between HMW glutenin subunit composition and the bread-making quality of British-grown wheat varieties. J. Sci. Food Agric. 40: 51-65.
37. PEI, Y., A. WANG, X. AN, X. LI, Y. ZHANG et al., 2007 Characterization and comparative analysis of three low molecular weight glutenin C-subunit genes isolated from Aegilops tauschii. Can. J. Plant Sci. 87: 273-280.
38. ROTH, D. B., and J. H. WILSON, 1986 Nonhomologous recombination in mammalian cells: role for short sequence homologies in the joining reaction. Mol. Cell. Biol. 6: 4295-4304.
39. SABELLI, P. A., and P. R. SHEWRY, 1991 Characterization and organization of gene families at the Gli-1 loci of bread and durum wheats by restriction fragment analysis. Theor. Appl. Genet. 83: 209-216.
40. SINGH, N. K., and K. W. SHEPHERD, 1988 Linkage mapping of the genes controlling endosperm proteins in wheat. 1. Genes on the short arms of group 1 chromosomes. Theor. Appl. Genet. 75: 628-641.
41. SMITH, C. M., S. STARKEY, B. S. GILL, H. HAVLÍCKOVÁ and V. HOLUBEC, 2004 Identification of Aegilops germplasm with multiple aphid resistance. Euphytica 135: 265-273.
42. SPIELMEYER, W., O. MOULLET, A. LAROCHE and E. S. LAGUDAH, 2000 Highly recombinogenic regions at seed storage protein loci on chromosome 1DS of Aegilops tauschii, the D-genome donor of wheat. Genetics 155: 361-367.
43. m genomes of wheat. Plant Cell 15: 1186-1197.
44. WRIGLEY, C. W., 1996 Giant proteins with flour power. Nature 381: 738-739.
45. YAN, Y., S. PRODANOVIC, N. MLADENOV and M. MILOVANOVIC, 1999 Genetic control of low molecular weight glutenin subunits in wheat by A-PAGE analysis. Cereal Res. Commun. 27: 251-257.
46. YAN, Y., S. L. K. HSAM, J. YU, Y. JIANG, I. OHTSUKA et al., 2003a HMW and LMW glutenin alleles among putative tetraploid and hexaploid T. spelta progenitors. Theor. Appl. Genet. 107: 1321-1330.
47. YAN, Y., S. L. K. HSAM, J. Z. YU, Y. JIANG and F. J. ZELLER, 2003b Allelic variation of the HMW glutenin subunits in Aegilops tauschii accessions detected by sodium dodecyl sulphate (SDS-PAGE), acid polyacrylamide gel (A-PAGE) and capillary electrophoresis. Euphytica 130: 377-385.
48. t gliadin loci in Aegilops tauschii as revealed by acid polyacrylamide gel and capillary electrophoresis. Plant Breed. 122: 120-124.
49. t 1 glutenin gene of Aegilops tauschii. Theor. Appl. Genet. 108: 1349-1358.
50. ZHANG, W., M. C. GIANIBELLI, L. R. RAMPLING and K. R. GALE, 2004 Characterisation and marker development for low molecular weight glutenin genes from Glu-A3 alleles of bread wheat (Triticum aestivum L.). Theor. Appl. Genet. 108: 1409-1419.
51. t) from Aegilops tauschii. Genome 49: 735-745.
52. ZHANG, Y. Z., X. H. LI, A. L. WANG, X. L. AN, Q. ZHANG et al., 2008 Novel x-type HMW glutenin genes from Aegilops tauschii and their implications on the wheat origin and evolution mechanism of Glu-D1-1 proteins. Genetics 178: 23-33.