DNA duplex-based fluorescence probes/sensors using monomer-excimer switching

Yakugaku Zasshi

Volumn 128, Issue 11, 2008, Pages 1605-1613

  Fujimoto, Kazuhisa ^a   Inouye, Masahiko ^a  

^a UNIVERSITY OF TOYAMA   (Japan)

Author keywords

DNA duplex; Fluorescence probe sensor; Monomer excimer switching; Pyrene

Indexed keywords

DOUBLE STRANDED DNA; MONOMER; OLIGONUCLEOTIDE; PYRENE; RIBONUCLEASE; SINGLE STRANDED DNA;

DNA BINDING; DNA PROBE; DNA STRUCTURE; ENZYME ACTIVITY; FLUORESCENCE ANALYSIS; GENE TARGETING; REVIEW; SENSOR; SINGLE NUCLEOTIDE POLYMORPHISM;

DNA; FLUORESCENT DYES; MOLECULAR PROBE TECHNIQUES; PYRENES;

EID: 56049113806     PISSN: 00316903     EISSN: 13475231     Source Type: Journal    
DOI: 10.1248/yakushi.128.1605     Document Type: Review

References (25)

1. Winnik F. M., Chem. Rev., 93, 587-614 (1993).
2. Saito Y., Okamoto A., Saito I., Bioindustry, 23, 56-62 (2006).
3. Zama M., Bryan P. N., Harrington R. E., Olins A. L., Olins D. E., Cold Spring Harb. Symp. Quant. Biol., 42, 31-41 (1978).
4. Lehrer S. S., "Subcellular Biochemistry, Vol. 24: Proteins: Structure, Function, and Engineering," eds. by Biswas B. B., Roy S., Plenum, New York, 1995, pp. 115-132.
5. Wieb van der Meew B., "Subcellular Biochemistry, Vol. 13: Fluorescence Studies on Biological Membranes," ed. by Hilderson H. J., Plenum, New York, 1988, pp. 1-53.
6. Yang R.-H., Chan W.-H., Lee A. W. M., Xia P.-F., Zhang H.-K., Li K., J. Am. Chem. Soc., 125, 2884-2885 (2003).
7. Tyagi S., Kramer F. R., Nat. Biotechnol., 14, 303-308 (1996).
8. Fang X., Mi Y., Li J., Beck T., Schuster S., Tan W., Cell Biochem. Biophys., 37, 71-81 (2002).
9. Tan W., Fang X., Mi Y., Li J., Liu X., Chem. Eur. J., 6, 1107-1111 (2000).
10. Stryer L., Annu. Rev. Biochem., 47, 819-846 (1978).
11. Masuko M., Ohtani H., Ebata K., Shimadzu A., Nucleic Acids Res., 26, 5409-5416 (1998).
12. Paris P. L., Langenhan J. M., Kool E. T., Nucleic Acids Res., 26, 3789-3793 (1998).
13. Fujimoto K., Shimizu H., Inouye M., J. Org. Chem., 69, 3271-3275 (2004).
14. Maeda H., Maeda T., Mizuno K., Fujimoto K., Shimizu H., Inouye M., Chem. Eur. J., 12, 824-831 (2006).
15. Chen Y., Yang C. J., Wu Y., Conlon P., Kim Y., Lin H., Tan W., ChemBioChem., 9, 355-359 (2008).
16. Fujimoto K., Muto Y., Inouye M., Chem. Commun., 4780-4782 (2005).
17. Poomia N. S., J. Am. Chem. Soc., 96, 1012-1019 (1974).
18. Yamauchi A., Hayashita T., Kato A., Nishizawa S., Watanabe M., Teramae N., Anal. Chem., 72, 5841-5846 (2000).
19. Yamauchi A., Hayashita T., Nishizawa S., Watanabe M., Teramae N., J. Am. Chem. Soc., 121, 2319-2320 (1999).
20. Wolfe A. R., Meehan T., Nucleic Acids Res., 22, 3147-3150 (1994).
21. Ueyama H., Takagi M., Takenaka S., J. Am. Chem. Soc., 124, 14286-14287 (2002).
22. He H., Mortellaro M. A., Leiner M. J. P., Fraatz R. J., Tusa J. K., J. Am. Chem. Soc., 125, 1468-1469 (2003).
23. Gunnlaugsson T., Leonard J. P., Chem. Commun., 2424-2425 (2003).
24. Kano K., Nishiyabu R., Asada T., Kuroda Y., J. Am. Chem. Soc., 124, 9937-9944 (2002).
25. Fujimoto K., Muto Y., Inouye M., Bioconjugate. Chem., 19, 1132-1134 (2008).