-
2
-
-
0033567954
-
NuA4, an essential transcription adaptor/histone H4 acetyltransferase complex containing Esa1p and the ATM-related cofactor Tra1p
-
Allard S, Utley RT, Savard J, Clarke A, Grant P, Brandl CJ, Pillus L, Workman JL, Côté J (1999) NuA4, an essential transcription adaptor/histone H4 acetyltransferase complex containing Esa1p and the ATM-related cofactor Tra1p. EMBO J 18: 5108-5119.
-
(1999)
EMBO J
, vol.18
, pp. 5108-5119
-
-
Allard, S.1
Utley, R.T.2
Savard, J.3
Clarke, A.4
Grant, P.5
Brandl, C.J.6
Pillus, L.7
Workman, J.L.8
Côté, J.9
-
3
-
-
41149115039
-
Eaf1 is the platform for NuA4 molecular assembly that evolutionarily links chromatin acetylation to ATP-dependent exchange of histone H2A variants
-
Auger A, Galarneau L, Altaf M, Nourani A, Doyon Y, Utley RT, Cronier D, Allard S, Côté J (2008) Eaf1 is the platform for NuA4 molecular assembly that evolutionarily links chromatin acetylation to ATP-dependent exchange of histone H2A variants. Mol Cell Biol 28: 2257-2270.
-
(2008)
Mol Cell Biol
, vol.28
, pp. 2257-2270
-
-
Auger, A.1
Galarneau, L.2
Altaf, M.3
Nourani, A.4
Doyon, Y.5
Utley, R.T.6
Cronier, D.7
Allard, S.8
Côté, J.9
-
4
-
-
0037179692
-
Acetylation of histone H4 by Esa1 is required for DNA double-strand break repair
-
Bird AW, Yu DY, Pray-Grant MG, Qiu Q, Harmon KE, Megee PC, Grant PA, Smith MM, Christman MF (2002) Acetylation of histone H4 by Esa1 is required for DNA double-strand break repair. Nature 419: 411-415.
-
(2002)
Nature
, vol.419
, pp. 411-415
-
-
Bird, A.W.1
Yu, D.Y.2
Pray-Grant, M.G.3
Qiu, Q.4
Harmon, K.E.5
Megee, P.C.6
Grant, P.A.7
Smith, M.M.8
Christman, M.F.9
-
5
-
-
4143116698
-
Direct physical and functional interaction of the NuA4 complex components Yaf9p and Swc4p
-
Bittner CB, Zeisig DT, Zeisig BB, Slany RK (2004) Direct physical and functional interaction of the NuA4 complex components Yaf9p and Swc4p. Eukaryot Cell 3: 976-983.
-
(2004)
Eukaryot Cell
, vol.3
, pp. 976-983
-
-
Bittner, C.B.1
Zeisig, D.T.2
Zeisig, B.B.3
Slany, R.K.4
-
6
-
-
0021668558
-
A positive selection for mutants lacking orotidine-5-phosphate decarboxylase activity in yeast: 5-fluoro-orotic acid resistance
-
Boeke JD, Lacroute F, Fink GR (1984) A positive selection for mutants lacking orotidine-5-phosphate decarboxylase activity in yeast: 5-fluoro-orotic acid resistance. Mol Gen Genet 197: 345-346.
-
(1984)
Mol Gen Genet
, vol.197
, pp. 345-346
-
-
Boeke, J.D.1
Lacroute, F.2
Fink, G.R.3
-
7
-
-
0036320668
-
Genomic screen for vacuolar protein sorting genes in Saccharomyces cerevisiae
-
Bonangelino CJ, Chavez EM, Bonifacino JS (2002) Genomic screen for vacuolar protein sorting genes in Saccharomyces cerevisiae. Mol Biol Cell 13: 2486-2501.
-
(2002)
Mol Biol Cell
, vol.13
, pp. 2486-2501
-
-
Bonangelino, C.J.1
Chavez, E.M.2
Bonifacino, J.S.3
-
8
-
-
0038284360
-
Yeast enhancer of polycomb defines global Esa1-dependent acetylation of chromatin
-
Boudreault AA, Cronier D, Selleck W, Lacoste N, Utley RT, Allard S, Savard J, Lane WS, Tan S, Côté J (2003) Yeast enhancer of polycomb defines global Esa1-dependent acetylation of chromatin. Genes Dev 17: 1415-1428.
-
(2003)
Genes Dev
, vol.17
, pp. 1415-1428
-
-
Boudreault, A.A.1
Cronier, D.2
Selleck, W.3
Lacoste, N.4
Utley, R.T.5
Allard, S.6
Savard, J.7
Lane, W.S.8
Tan, S.9
Côté, J.10
-
10
-
-
0035893240
-
Histone H3 lysine 4 methylation is mediated by Set1 and required for cell growth and rDNA silencing in Saccharomyces cerevisiae
-
Briggs SD, Bryk M, Strahl BD, Cheung WL, Davie JK, Dent SY, Winston F, Allis CD (2001) Histone H3 lysine 4 methylation is mediated by Set1 and required for cell growth and rDNA silencing in Saccharomyces cerevisiae. Genes Dev 15: 3286-3295.
-
(2001)
Genes Dev
, vol.15
, pp. 3286-3295
-
-
Briggs, S.D.1
Bryk, M.2
Strahl, B.D.3
Cheung, W.L.4
Davie, J.K.5
Dent, S.Y.6
Winston, F.7
Allis, C.D.8
-
11
-
-
35848958821
-
Chromatin remodeling: Insights and intrigue from single-molecule studies
-
Cairns BR (2007) Chromatin remodeling: insights and intrigue from single-molecule studies. Nat Struct Mol Biol 14: 989-996.
-
(2007)
Nat Struct Mol Biol
, vol.14
, pp. 989-996
-
-
Cairns, B.R.1
-
12
-
-
14544303760
-
Structure and dynamic properties of nucleosome core particles
-
Chakravarthy S, Park YJ, Chodaparambil J, Edayathumangalam RS, Luger K (2005) Structure and dynamic properties of nucleosome core particles. FEBS Lett 579: 895-898.
-
(2005)
FEBS Lett
, vol.579
, pp. 895-898
-
-
Chakravarthy, S.1
Park, Y.J.2
Chodaparambil, J.3
Edayathumangalam, R.S.4
Luger, K.5
-
13
-
-
0032965152
-
Esa1p is an essential histone acetyltransferase required for cell cycle progression
-
Clarke AS, Lowell JE, Jacobson SJ, Pillus L (1999) Esa1p is an essential histone acetyltransferase required for cell cycle progression. Mol Cell Biol 19: 2515-2526.
-
(1999)
Mol Cell Biol
, vol.19
, pp. 2515-2526
-
-
Clarke, A.S.1
Lowell, J.E.2
Jacobson, S.J.3
Pillus, L.4
-
14
-
-
1342346531
-
Structural and functional conservation of the NuA4 histone acetyltransferase complex from yeast to humans
-
Doyon Y, Selleck W, Lane WS, Tan S, Côté J (2004) Structural and functional conservation of the NuA4 histone acetyltransferase complex from yeast to humans. Mol Cell Biol 24: 1884-1896.
-
(2004)
Mol Cell Biol
, vol.24
, pp. 1884-1896
-
-
Doyon, Y.1
Selleck, W.2
Lane, W.S.3
Tan, S.4
Côté, J.5
-
15
-
-
0028816556
-
Direct random mutagenesis of gene-sized DNA fragments using polymerase chain reaction
-
Fromant M, Blanquet S, Plateau P (1995) Direct random mutagenesis of gene-sized DNA fragments using polymerase chain reaction. Anal Biochem 224: 347-353.
-
(1995)
Anal Biochem
, vol.224
, pp. 347-353
-
-
Fromant, M.1
Blanquet, S.2
Plateau, P.3
-
16
-
-
77956677762
-
Transformation of yeast by the lithium acetate/single-stranded carrier DNA/PEG method
-
Gietz RD, Woods RA (1998) Transformation of yeast by the lithium acetate/single-stranded carrier DNA/PEG method. Methods Microbiol 26: 53-66.
-
(1998)
Methods Microbiol
, vol.26
, pp. 53-66
-
-
Gietz, R.D.1
Woods, R.A.2
-
17
-
-
56049121450
-
-
Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT. Nucleic Acids Symp Ser.
-
Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT. Nucleic Acids Symp Ser.
-
-
-
-
18
-
-
0030966330
-
A review of phenotypes in Saccharomyces cerevisiae
-
Hampsey M (1997) A review of phenotypes in Saccharomyces cerevisiae. Yeast 13: 1099-1133.
-
(1997)
Yeast
, vol.13
, pp. 1099-1133
-
-
Hampsey, M.1
-
19
-
-
0017135816
-
Mutagenesis of plasmid DNA with hydroxylamine: Isolation of mutants of multi-copy plasmids
-
Humphreys GO, Willshaw GA, Smith HR, Anderson ES (1976) Mutagenesis of plasmid DNA with hydroxylamine: isolation of mutants of multi-copy plasmids. Mol Gen Genet 145: 101-108.
-
(1976)
Mol Gen Genet
, vol.145
, pp. 101-108
-
-
Humphreys, G.O.1
Willshaw, G.A.2
Smith, H.R.3
Anderson, E.S.4
-
20
-
-
0034307468
-
Histone H2A.Z has a conserved function that is distinct from that of the major H2A sequence variants
-
Jackson JD, Gorovsky MA (2000) Histone H2A.Z has a conserved function that is distinct from that of the major H2A sequence variants. Nucleic Acids Res 28: 3811-3816.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 3811-3816
-
-
Jackson, J.D.1
Gorovsky, M.A.2
-
21
-
-
33645001675
-
The Saccharomyces cerevisiae histone H2A variant Htz1 is acetylated by NuA4
-
Keogh MC, Mennella TA, Sawa C et al. (2006) The Saccharomyces cerevisiae histone H2A variant Htz1 is acetylated by NuA4. Genes Dev 20: 660-665.
-
(2006)
Genes Dev
, vol.20
, pp. 660-665
-
-
Keogh, M.C.1
Mennella, T.A.2
Sawa, C.3
-
22
-
-
19344372948
-
A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin
-
Kobor MS, Venkatasubrahmanyam S, Meneghini MD, Gin JW, Jennings JL, Link AJ, Madhani HD, Rine J (2004) A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin. PLoS Biol 2: 587-599.
-
(2004)
PLoS Biol
, vol.2
, pp. 587-599
-
-
Kobor, M.S.1
Venkatasubrahmanyam, S.2
Meneghini, M.D.3
Gin, J.W.4
Jennings, J.L.5
Link, A.J.6
Madhani, H.D.7
Rine, J.8
-
23
-
-
33847076849
-
Chromatin modifications and their function
-
Kouzarides T (2007) Chromatin modifications and their function. Cell 128: 693-705.
-
(2007)
Cell
, vol.128
, pp. 693-705
-
-
Kouzarides, T.1
-
24
-
-
9144269660
-
A Snf2 family ATPase complex required for recruitment of the histone H2A variant Htz1
-
Krogan NJ, Keogh MC, Datta N, Sawa C, Ryan OW, Ding H, Haw RA, Pootoolal J, Tong A, Canadien V, Richards DP, Wu X, Emili A, Hughes TR, Buratowski S, Greenblatt JF (2003) A Snf2 family ATPase complex required for recruitment of the histone H2A variant Htz1. Mol Cell 12: 1565-1576.
-
(2003)
Mol Cell
, vol.12
, pp. 1565-1576
-
-
Krogan, N.J.1
Keogh, M.C.2
Datta, N.3
Sawa, C.4
Ryan, O.W.5
Ding, H.6
Haw, R.A.7
Pootoolal, J.8
Tong, A.9
Canadien, V.10
Richards, D.P.11
Wu, X.12
Emili, A.13
Hughes, T.R.14
Buratowski, S.15
Greenblatt, J.F.16
-
25
-
-
35848946372
-
Primers on chromatin
-
Lall S (2007) Primers on chromatin. Nat Struct Mol Biol 14: 1110-1155.
-
(2007)
Nat Struct Mol Biol
, vol.14
, pp. 1110-1155
-
-
Lall, S.1
-
26
-
-
0042470632
-
Yaf9, a novel NuA4 histone acetyltransferase subunit, is required for the cellular response to spindle stress in yeast
-
Le Masson I, Yu DY, Jensen K, Chevalier A, Courbeyrette R, Boulard Y, Smith MM, Mann C (2003) Yaf9, a novel NuA4 histone acetyltransferase subunit, is required for the cellular response to spindle stress in yeast. Mol Cell Biol 23: 6086-6102.
-
(2003)
Mol Cell Biol
, vol.23
, pp. 6086-6102
-
-
Le Masson, I.1
Yu, D.Y.2
Jensen, K.3
Chevalier, A.4
Courbeyrette, R.5
Boulard, Y.6
Smith, M.M.7
Mann, C.8
-
27
-
-
17044365726
-
Nucleosome and chromatin fiber dynamics
-
Luger K, Hansen JC (2005) Nucleosome and chromatin fiber dynamics. Curr Opin Struct Biol 15: 188-196.
-
(2005)
Curr Opin Struct Biol
, vol.15
, pp. 188-196
-
-
Luger, K.1
Hansen, J.C.2
-
28
-
-
13244280001
-
The SYSTERS Protein Family Database in 2005
-
Meinel T, Krause A, Luz H, Vingron M, Staub E (2005) The SYSTERS Protein Family Database in 2005. Nucleic Acids Res 33: D226-D229.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Meinel, T.1
Krause, A.2
Luz, H.3
Vingron, M.4
Staub, E.5
-
29
-
-
0033557326
-
Random mutagenesis by recombinational capture of PCR products in Bacillus subtilis and Acinetobacter calcoaceticus
-
Melnikov A, Youngman PJ (1999) Random mutagenesis by recombinational capture of PCR products in Bacillus subtilis and Acinetobacter calcoaceticus. Nucleic Acids Res 27: 1056-1062.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 1056-1062
-
-
Melnikov, A.1
Youngman, P.J.2
-
30
-
-
41149083933
-
Functional dissection of the NuA4 histone acetyltransferase reveals its role as a genetic hub and that Eaf1 is essential for complex integrity
-
Mitchell L, Lambert JP, Gerdes M, Al-Madhoun AS, Skerjanc IS, Figeys D, Baetz K (2008) Functional dissection of the NuA4 histone acetyltransferase reveals its role as a genetic hub and that Eaf1 is essential for complex integrity. Mol Cell Biol 28: 2244-2256.
-
(2008)
Mol Cell Biol
, vol.28
, pp. 2244-2256
-
-
Mitchell, L.1
Lambert, J.P.2
Gerdes, M.3
Al-Madhoun, A.S.4
Skerjanc, I.S.5
Figeys, D.6
Baetz, K.7
-
31
-
-
0348184963
-
ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex
-
Mizuguchi G, Shen X, Landry J, Wu WH, Sen S, Wu C (2004) ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex. Science 303: 343-348.
-
(2004)
Science
, vol.303
, pp. 343-348
-
-
Mizuguchi, G.1
Shen, X.2
Landry, J.3
Wu, W.H.4
Sen, S.5
Wu, C.6
-
32
-
-
0028953840
-
Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds
-
Mumberg D, Müller R, Funk M (1995) Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds. Gene 156: 119-122.
-
(1995)
Gene
, vol.156
, pp. 119-122
-
-
Mumberg, D.1
Müller, R.2
Funk, M.3
-
33
-
-
0026695941
-
A simple and highly efficient procedure for rescuing autonomous plasmids from yeast
-
Robzyk K, Kassir Y (1992) A simple and highly efficient procedure for rescuing autonomous plasmids from yeast. Nucleic Acids Res 20: 3790.
-
(1992)
Nucleic Acids Res
, vol.20
, pp. 3790
-
-
Robzyk, K.1
Kassir, Y.2
-
34
-
-
0033945861
-
DNMT1 binds HDAC2 and a new co-repressor, DMAP1, to form a complex at replication foci
-
Rountree MR, Bachman KE, Baylin SB (2000) DNMT1 binds HDAC2 and a new co-repressor, DMAP1, to form a complex at replication foci. Nat Genet 25: 269-277.
-
(2000)
Nat Genet
, vol.25
, pp. 269-277
-
-
Rountree, M.R.1
Bachman, K.E.2
Baylin, S.B.3
-
35
-
-
36448949026
-
Multivalent engagement of chromatin modifications by linked binding modules
-
Ruthenburg AJ, Li H, Patel DJ, Allis CD (2007) Multivalent engagement of chromatin modifications by linked binding modules. Nat Rev Mol Cell Biol 8: 983-994.
-
(2007)
Nat Rev Mol Cell Biol
, vol.8
, pp. 983-994
-
-
Ruthenburg, A.J.1
Li, H.2
Patel, D.J.3
Allis, C.D.4
-
36
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, USA
-
Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, USA.
-
(1989)
Molecular cloning: A laboratory manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
37
-
-
34547890019
-
Functions of site-specific histone acetylation and deacetylation
-
Shahbazian MD, Grunstein M (2007) Functions of site-specific histone acetylation and deacetylation. Annu Rev Biochem 76: 75-100.
-
(2007)
Annu Rev Biochem
, vol.76
, pp. 75-100
-
-
Shahbazian, M.D.1
Grunstein, M.2
-
38
-
-
0034601464
-
A chromatin remodelling complex involved in transcription and DNA processing
-
Shen X, Mizuguchi G, Hamiche A, Wu C (2000) A chromatin remodelling complex involved in transcription and DNA processing. Nature 406: 541-544.
-
(2000)
Nature
, vol.406
, pp. 541-544
-
-
Shen, X.1
Mizuguchi, G.2
Hamiche, A.3
Wu, C.4
-
39
-
-
0036275447
-
Getting started with yeast
-
Sherman F (2002) Getting started with yeast. Methods Enzymol 350: 3-41.
-
(2002)
Methods Enzymol
, vol.350
, pp. 3-41
-
-
Sherman, F.1
-
40
-
-
33746324216
-
Chromatin modifications by methylation and ubiquitination: Implications in the regulation of gene expression
-
Shilatifard A (2006) Chromatin modifications by methylation and ubiquitination: implications in the regulation of gene expression. Annu Rev Biochem 75: 243-269.
-
(2006)
Annu Rev Biochem
, vol.75
, pp. 243-269
-
-
Shilatifard, A.1
-
41
-
-
0024669291
-
A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae
-
Sikorski RS, Hieter P (1989) A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 122: 19-27.
-
(1989)
Genetics
, vol.122
, pp. 19-27
-
-
Sikorski, R.S.1
Hieter, P.2
-
42
-
-
0032584196
-
ESA1 is a histone acetyltransferase that is essential for growth in yeast
-
Smith ER, Eisen A, Gu W, Sattah M, Pannuti A, Zhou J, Cook RG, Lucchesi JC, Allis CD (1998) ESA1 is a histone acetyltransferase that is essential for growth in yeast. Proc Natl Acad Sci USA 95: 3561-3565.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 3561-3565
-
-
Smith, E.R.1
Eisen, A.2
Gu, W.3
Sattah, M.4
Pannuti, A.5
Zhou, J.6
Cook, R.G.7
Lucchesi, J.C.8
Allis, C.D.9
-
43
-
-
0027309148
-
Efficient random mutagenesis method with adjustable mutation frequency by use of PCR and dITP
-
Spee JH, de Vos WM, Kuipers OP (1993) Efficient random mutagenesis method with adjustable mutation frequency by use of PCR and dITP. Nucleic Acids Res 21: 777-778.
-
(1993)
Nucleic Acids Res
, vol.21
, pp. 777-778
-
-
Spee, J.H.1
de Vos, W.M.2
Kuipers, O.P.3
-
44
-
-
35848961668
-
How chromatin-binding modules interpret histone modifications: Lessons from professional pocket pickers
-
Taverna SD, Li H, Ruthenburg AJ, Allis CD, Patel DJ (2007) How chromatin-binding modules interpret histone modifications: lessons from professional pocket pickers. Nat Struct Mol Biol 14: 1025-1040.
-
(2007)
Nat Struct Mol Biol
, vol.14
, pp. 1025-1040
-
-
Taverna, S.D.1
Li, H.2
Ruthenburg, A.J.3
Allis, C.D.4
Patel, D.J.5
-
45
-
-
28544442465
-
Swc2 is a widely conserved H2AZ-binding module essential for ATP-dependent histone exchange
-
Wu WH, Alami S, Luk E, Wu CH, Sen S, Mizuguchi G, Wei D, Wu C (2005) Swc2 is a widely conserved H2AZ-binding module essential for ATP-dependent histone exchange. Nat Struct Mol Biol 12: 1064-1071.
-
(2005)
Nat Struct Mol Biol
, vol.12
, pp. 1064-1071
-
-
Wu, W.H.1
Alami, S.2
Luk, E.3
Wu, C.H.4
Sen, S.5
Mizuguchi, G.6
Wei, D.7
Wu, C.8
-
46
-
-
0032761936
-
Random mutagenesis libraries: Optimization and simplification by PCR
-
1106, 1108
-
Xu H, Petersen EI, Petersen SB, el-Gewely MR (1999) Random mutagenesis libraries: optimization and simplification by PCR. Biotechniques 7: 1102-1104, 1106, 1108.
-
(1999)
Biotechniques
, vol.7
, pp. 1102-1104
-
-
Xu, H.1
Petersen, E.I.2
Petersen, S.B.3
el-Gewely, M.R.4
|