메뉴 건너뛰기




Volumn 10, Issue 12, 2008, Pages 3255-3264

A real-time polymerase chain reaction assay for quantitative detection of the human-specific enterococci surface protein marker in sewage and environmental waters

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; MEMBRANE PROTEIN; ORGANIC COMPOUND; SYBR GREEN I;

EID: 55849116407     PISSN: 14622912     EISSN: 14622920     Source Type: Journal    
DOI: 10.1111/j.1462-2920.2008.01715.x     Document Type: Article
Times cited : (24)

References (41)
  • 1
    • 16444374125 scopus 로고    scopus 로고
    • Evidence of septic system failure determined by a bacterial biochemical fingerprinting method
    • Ahmed, W., Neller, R. Katouli, M. (2005) Evidence of septic system failure determined by a bacterial biochemical fingerprinting method. J Appl Microbiol 98: 910 920.
    • (2005) J Appl Microbiol , vol.98 , pp. 910-920
    • Ahmed, W.1    Neller, R.2    Katouli, M.3
  • 2
    • 34547412984 scopus 로고    scopus 로고
    • A combination of library dependent and library independent methods to identify human fecal pollution in non-sewered catchments
    • Ahmed, W., Stewart, J., Gardner, T., Powell, D., Brooks, P., Sullivan, D. Tindale, N. (2007) A combination of library dependent and library independent methods to identify human fecal pollution in non-sewered catchments. Water Res 41: 3771 3779.
    • (2007) Water Res , vol.41 , pp. 3771-3779
    • Ahmed, W.1    Stewart, J.2    Gardner, T.3    Powell, D.4    Brooks, P.5    Sullivan, D.6    Tindale, N.7
  • 3
    • 38349138542 scopus 로고    scopus 로고
    • Evaluation of Bacteroides markers for the detection of human faecal pollution in non-sewered catchments
    • Ahmed, W., Stewart, J., Powell, D. Gardner, T. (2008a) Evaluation of Bacteroides markers for the detection of human faecal pollution in non-sewered catchments. Lett Appl Microbiol 46: 237 242.
    • (2008) Lett Appl Microbiol , vol.46 , pp. 237-242
    • Ahmed, W.1    Stewart, J.2    Powell, D.3    Gardner, T.4
  • 5
    • 8744247428 scopus 로고    scopus 로고
    • Real-time PCR for detection and quantification of the protistan parasite Perkinsus marinus in environmental waters
    • Audemard, C., Reece, K.S. Burreson, E.M. (2004) Real-time PCR for detection and quantification of the protistan parasite Perkinsus marinus in environmental waters. Appl Environ Microbiol 70: 6611 6618.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 6611-6618
    • Audemard, C.1    Reece, K.S.2    Burreson, E.M.3
  • 6
    • 0033774937 scopus 로고    scopus 로고
    • A PCR assay to discriminate human and ruminant faeces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA
    • Bernhard, A.E. Field, K.G. (2000) A PCR assay to discriminate human and ruminant faeces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA. Appl Environ Microbiol 66: 4571 4574.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 4571-4574
    • Bernhard, A.E.1    Field, K.G.2
  • 7
    • 55849097680 scopus 로고    scopus 로고
    • Identification of sources of faecal source isolates in Ningi Creek, Australia. On-site 07, University of New England, Australia, September 25-27. pp. 83-90.
    • Carroll, S., Dawes, L., Hargreaves, M. Goonetilleke, A. (2007) Identification of sources of faecal source isolates in Ningi Creek, Australia. On-site 07, University of New England, Australia, September 25-27. pp. 83-90.
    • (2007)
    • Carroll, S.1    Dawes, L.2    Hargreaves, M.3    Goonetilleke, A.4
  • 8
    • 32044447431 scopus 로고    scopus 로고
    • Real-time PCR quantification of human adenoviruses in urban rivers indicates genome prevalence but low infectivity
    • Choi, S. Jiang, S.C. (2005) Real-time PCR quantification of human adenoviruses in urban rivers indicates genome prevalence but low infectivity. Appl Environ Microbiol 71: 7426 7433.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 7426-7433
    • Choi, S.1    Jiang, S.C.2
  • 9
    • 0242489236 scopus 로고    scopus 로고
    • Evaluation of F+ RNA and DNA coliphages as source-specific indicators of fecal contamination in surface waters
    • Cole, D., Long, S.C. Sobsey, M.D. (2003) Evaluation of F+ RNA and DNA coliphages as source-specific indicators of fecal contamination in surface waters. Appl Environ Microbiol 69: 6507 6514.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 6507-6514
    • Cole, D.1    Long, S.C.2    Sobsey, M.D.3
  • 10
    • 0028032451 scopus 로고
    • IMS: A new selective enrichment technique for detection of Salmonella in foods
    • Cudjoe, K.S., Krona, R. Olsen, E. (1994) IMS: a new selective enrichment technique for detection of Salmonella in foods. Int J Food Microbiol 23: 159 165.
    • (1994) Int J Food Microbiol , vol.23 , pp. 159-165
    • Cudjoe, K.S.1    Krona, R.2    Olsen, E.3
  • 11
    • 36248992961 scopus 로고    scopus 로고
    • Assessment of the 16S-23S rDNA intergenic spacer region in Enterococcus spp. for microbial source tracking
    • Dickerson, J.W., Crozier, J.B., Hagedorn, C. Hassall, A. (2007) Assessment of the 16S-23S rDNA intergenic spacer region in Enterococcus spp. for microbial source tracking. J Environ Qual 36: 1661 1669.
    • (2007) J Environ Qual , vol.36 , pp. 1661-1669
    • Dickerson, J.W.1    Crozier, J.B.2    Hagedorn, C.3    Hassall, A.4
  • 12
    • 0034130242 scopus 로고    scopus 로고
    • Use of repetitive DNA sequences and the PCR to differentiate Escherichia coli isolates from human and animal sources
    • Dombek, P.E., Johnson, L.K., Zimmerley, S.T. Sadowsky, M.J. (2000) Use of repetitive DNA sequences and the PCR to differentiate Escherichia coli isolates from human and animal sources. Appl Environ Microbiol 66: 2572 2577.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 2572-2577
    • Dombek, P.E.1    Johnson, L.K.2    Zimmerley, S.T.3    Sadowsky, M.J.4
  • 13
    • 34547531503 scopus 로고    scopus 로고
    • Fecal source tracking, the indicator paradigm, and managing water quality
    • Field, K.G. Samadpour, M. (2007) Fecal source tracking, the indicator paradigm, and managing water quality. Water Res 41: 3517 3528.
    • (2007) Water Res , vol.41 , pp. 3517-3528
    • Field, K.G.1    Samadpour, M.2
  • 14
    • 17444394882 scopus 로고    scopus 로고
    • Molecular assays for targeting human and bovine enteric viruses in coastal waters and their application for library-independent source tracking
    • Fong, T.T.D.W., Griffin, D.W. Lipp, E.K. (2005) Molecular assays for targeting human and bovine enteric viruses in coastal waters and their application for library-independent source tracking. Appl Environ Microbiol 71: 2070 2078.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 2070-2078
    • Fong, T.T.D.W.1    Griffin, D.W.2    Lipp, E.K.3
  • 15
    • 34547754433 scopus 로고    scopus 로고
    • Evaluation of two-library-independent microbial source tracking methods to identify sources of fecal contamination in French estuaries
    • Gourmelon, M., Caprais, M.P., Ségura, R., Mennec, C.L., Lozach, S., Piriou, J.Y. Rincé, R.A. (2007) Evaluation of two-library-independent microbial source tracking methods to identify sources of fecal contamination in French estuaries. Appl Environ Microbiol 73: 4857 4866.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 4857-4866
    • Gourmelon, M.1    Caprais, M.P.2    Ségura, R.3    Mennec, C.L.4    Lozach, S.5    Piriou, J.Y.6    Rincé, R.A.7
  • 16
    • 4644269734 scopus 로고    scopus 로고
    • Evaluation of microbial source tracking methods using mixed sources in aqueous test samples
    • Griffith, J.F., Weisberg, S.B. McGee, C.D. (2003) Evaluation of microbial source tracking methods using mixed sources in aqueous test samples. J Water Health 1: 141 151.
    • (2003) J Water Health , vol.1 , pp. 141-151
    • Griffith, J.F.1    Weisberg, S.B.2    McGee, C.D.3
  • 18
    • 0036841451 scopus 로고    scopus 로고
    • Prevalence of esp, encoding the enterococcal surface protein in Enterococcus faecalis and Enterococcus faecium isolates from hospital patients, poultry and pigs in Denmark
    • Hammerum, A.M. Jensen, L.B. (2002) Prevalence of esp, encoding the enterococcal surface protein in Enterococcus faecalis and Enterococcus faecium isolates from hospital patients, poultry and pigs in Denmark. J Clin Microbiol 40: 4396.
    • (2002) J Clin Microbiol , vol.40 , pp. 4396
    • Hammerum, A.M.1    Jensen, L.B.2
  • 19
    • 14544307873 scopus 로고    scopus 로고
    • Detection of the esp gene in high-level gentamicin resistant Enterococcus faecalis strains from pet animals in Japan
    • Harada, T., Tsuji, N., Otsuki, K. Murase, T. (2005) Detection of the esp gene in high-level gentamicin resistant Enterococcus faecalis strains from pet animals in Japan. Vet Microbiol 106: 139 143.
    • (2005) Vet Microbiol , vol.106 , pp. 139-143
    • Harada, T.1    Tsuji, N.2    Otsuki, K.3    Murase, T.4
  • 20
    • 1642561792 scopus 로고    scopus 로고
    • A biomarker for the identification of swine fecal pollution in water, using the STII toxin gene from enterotoxigenic Escherichia coli
    • Khatib, L.A., Tsai, Y.L. Olson, B.H. (2003) A biomarker for the identification of swine fecal pollution in water, using the STII toxin gene from enterotoxigenic Escherichia coli. Appl Microbiol Biotechnol 63: 231 238.
    • (2003) Appl Microbiol Biotechnol , vol.63 , pp. 231-238
    • Khatib, L.A.1    Tsai, Y.L.2    Olson, B.H.3
  • 21
    • 34547597968 scopus 로고    scopus 로고
    • 16S rRNA-based assays for quantitative detection of universal, human-, cow-, and dog-specific fecal Bacteroidales: A Bayesian approach
    • Kildare, B.J., Leutenegger, C.M., McSwain, B.S., Bambic, D.G., Rajal, V.B. Wuertz, S. (2007) 16S rRNA-based assays for quantitative detection of universal, human-, cow-, and dog-specific fecal Bacteroidales: a Bayesian approach. Water Res 41: 3701 3715.
    • (2007) Water Res , vol.41 , pp. 3701-3715
    • Kildare, B.J.1    Leutenegger, C.M.2    McSwain, B.S.3    Bambic, D.G.4    Rajal, V.B.5    Wuertz, S.6
  • 22
    • 1642500157 scopus 로고    scopus 로고
    • A novel putative enterococcal pathogenicity island linked to the esp virulence genes of Enterococcus faecium and associated with epidemicity
    • Leavis, H., Top, J., Shankar, N., Borgen, K., Bonten, M. van Embden, J. Willems, R.J.L. (2004) A novel putative enterococcal pathogenicity island linked to the esp virulence genes of Enterococcus faecium and associated with epidemicity. J Bacteriol 186: 672 682.
    • (2004) J Bacteriol , vol.186 , pp. 672-682
    • Leavis, H.1    Top, J.2    Shankar, N.3    Borgen, K.4    Bonten, M.5    Van Embden, J.6    Willems, R.J.L.7
  • 23
    • 34447550867 scopus 로고    scopus 로고
    • Simple and rapid F+ coliphage culture, latex agglutination, and typing assay to detect and source track fecal contamination
    • Love, D.C. Sobsey, M.D. (2007) Simple and rapid F+ coliphage culture, latex agglutination, and typing assay to detect and source track fecal contamination. Appl Environ Microbiol 73: 4110 4118.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 4110-4118
    • Love, D.C.1    Sobsey, M.D.2
  • 24
    • 33845542335 scopus 로고    scopus 로고
    • Detection of human-derived fecal pollution in environmental waters by use of a PCR-based human polyomavirus assay
    • McQuaig, S.M., Scott, T.M., Harwood, V.J., Farrah, S.R. Lukasik, J.O. (2006) Detection of human-derived fecal pollution in environmental waters by use of a PCR-based human polyomavirus assay. Appl Environ Microbiol 72: 7567 7574.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 7567-7574
    • McQuaig, S.M.1    Scott, T.M.2    Harwood, V.J.3    Farrah, S.R.4    Lukasik, J.O.5
  • 25
    • 0242573472 scopus 로고    scopus 로고
    • Receiver operating characteristics curve analysis of beach water quality indicator variables
    • Morrison, A.M., Coughlin, K., Shine, J.P., Coull, B.A. Rex, A.C. (2003) Receiver operating characteristics curve analysis of beach water quality indicator variables. Appl Environ Microbiol 69: 6405 6411.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 6405-6411
    • Morrison, A.M.1    Coughlin, K.2    Shine, J.P.3    Coull, B.A.4    Rex, A.C.5
  • 26
    • 0037022422 scopus 로고    scopus 로고
    • Physical and genetic map of Enterococcus faecium ATCC
    • 19434 and demonstration of intra- and inter-specific genomic diversity in enterococci.
    • Oana, K., Okimura, Y., Kawakami, Y., Hayashida, N., Shimosaka, M., Okazaki, M., et al. (2002) Physical and genetic map of Enterococcus faecium ATCC 19434 and demonstration of intra- and inter-specific genomic diversity in enterococci. FEMS Microbiol Lett 207: 133 139.
    • (2002) FEMS Microbiol Lett , vol.207 , pp. 133-139
    • Oana, K.1    Okimura, Y.2    Kawakami, Y.3    Hayashida, N.4    Shimosaka, M.5    Okazaki, M.6
  • 27
    • 33847312252 scopus 로고    scopus 로고
    • Quantification of host-specific Bacteroides-Prevotella 16S rRNA genetic markers for assessment of fecal pollution in freshwater
    • Okabe, S., Okayama, N., Savichtcheva, O. Ito, T. (2006) Quantification of host-specific Bacteroides-Prevotella 16S rRNA genetic markers for assessment of fecal pollution in freshwater. Appl Microbiol Biotechnol 74: 894 901.
    • (2006) Appl Microbiol Biotechnol , vol.74 , pp. 894-901
    • Okabe, S.1    Okayama, N.2    Savichtcheva, O.3    Ito, T.4
  • 28
    • 34547421264 scopus 로고    scopus 로고
    • Relationships between Bacteroides 16S rRNA genetic markers and presence of bacterial enteric pathogens and conventional fecal indicators
    • Olga, S., Okayama, N. Satoshi, O. (2007) Relationships between Bacteroides 16S rRNA genetic markers and presence of bacterial enteric pathogens and conventional fecal indicators. Water Res 41: 3615 3628.
    • (2007) Water Res , vol.41 , pp. 3615-3628
    • Olga, S.1    Okayama, N.2    Satoshi, O.3
  • 29
    • 0032974775 scopus 로고    scopus 로고
    • Discriminant analysis of ribotype profiles of Escherichia coli for differentiating human and non-human sources of fecal pollution
    • Parveen, S., Portier, K.M., Robinson, K., Edmiston, L. Tamplin, M.L. (1999) Discriminant analysis of ribotype profiles of Escherichia coli for differentiating human and non-human sources of fecal pollution. Appl Environ Microbiol 65: 3142 3147.
    • (1999) Appl Environ Microbiol , vol.65 , pp. 3142-3147
    • Parveen, S.1    Portier, K.M.2    Robinson, K.3    Edmiston, L.4    Tamplin, M.L.5
  • 30
    • 34547476651 scopus 로고    scopus 로고
    • Quo vadis source tracking? Towards a strategic framework for environmental monitoring of fecal pollution
    • Santo Domingo, J.W., Bambic, D.G., Edge, T.A. Wuertz, S. (2007) Quo vadis source tracking? Towards a strategic framework for environmental monitoring of fecal pollution. Water Res 41: 3539 3552.
    • (2007) Water Res , vol.41 , pp. 3539-3552
    • Santo Domingo, J.W.1    Bambic, D.G.2    Edge, T.A.3    Wuertz, S.4
  • 32
    • 11244270375 scopus 로고    scopus 로고
    • Potential use of a host-associated molecular in Enterococcus faecium as an index of human fecal pollution
    • Scott, T.M., Jenkins, T.M., Lukasik, J. Rose, J.B. (2005) Potential use of a host-associated molecular in Enterococcus faecium as an index of human fecal pollution. Environ Sci Technol 39: 283 287.
    • (2005) Environ Sci Technol , vol.39 , pp. 283-287
    • Scott, T.M.1    Jenkins, T.M.2    Lukasik, J.3    Rose, J.B.4
  • 33
    • 12744260019 scopus 로고    scopus 로고
    • Detection and quantification of the human-specific HF183 Bacteroides 16S rRNA genetic marker with real-time PCR for assessment of human faecal pollution in freshwater
    • Seurinck, S., Defoirdt, T., Verstraete, W. Siciliano, S.D. (2005) Detection and quantification of the human-specific HF183 Bacteroides 16S rRNA genetic marker with real-time PCR for assessment of human faecal pollution in freshwater. Environ Microbiol 7: 249 259.
    • (2005) Environ Microbiol , vol.7 , pp. 249-259
    • Seurinck, S.1    Defoirdt, T.2    Verstraete, W.3    Siciliano, S.D.4
  • 34
    • 33745271405 scopus 로고    scopus 로고
    • Identification of human fecal pollution sources in a coastal area: A case study at Oostende (Belgium)
    • Seurinck, S., Verdievel, M., Verstraete, W. Siciliano, S.D. (2006) Identification of human fecal pollution sources in a coastal area: a case study at Oostende (Belgium). J Water Health 4: 167 175.
    • (2006) J Water Health , vol.4 , pp. 167-175
    • Seurinck, S.1    Verdievel, M.2    Verstraete, W.3    Siciliano, S.D.4
  • 35
    • 34247622189 scopus 로고    scopus 로고
    • Performance, design, and analysis in microbial source tracking studies
    • Stoeckel, D.M. Harwood, V.J. (2007) Performance, design, and analysis in microbial source tracking studies. Appl Environ Microbiol 73: 2405 2415.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 2405-2415
    • Stoeckel, D.M.1    Harwood, V.J.2
  • 36
    • 33645644465 scopus 로고    scopus 로고
    • Detection of Salmonella spp. in water using magnetic capture hybridization combined with PCR or real-time PCR
    • Thomson, D.E., Rajal, V.B. De Batz, S. Wuertz, S. (2006) Detection of Salmonella spp. In water using magnetic capture hybridization combined with PCR or real-time PCR. J Water Health 4: 67 75.
    • (2006) J Water Health , vol.4 , pp. 67-75
    • Thomson, D.E.1    Rajal, V.B.2    De Batz, S.3    Wuertz, S.4
  • 37
    • 32544440176 scopus 로고    scopus 로고
    • Numbers of fecal streptococci and Escherichia coli in fresh and dry cattle, horse, and sheep manure
    • Weaver, R.W., Entry, J.A. Graves, A. (2005) Numbers of fecal streptococci and Escherichia coli in fresh and dry cattle, horse, and sheep manure. Can J Microbiol 51: 847 851.
    • (2005) Can J Microbiol , vol.51 , pp. 847-851
    • Weaver, R.W.1    Entry, J.A.2    Graves, A.3
  • 38
    • 34548598402 scopus 로고    scopus 로고
    • Incidence of the enterococcal surface protein (esp) gene in human and animal faecal sources
    • Whitman, R.L., Przzybyla-Kelly, K., Shivley, D.A. Byappanhalli. M.N. (2007) Incidence of the enterococcal surface protein (esp) gene in human and animal faecal sources. Environ Sci Technol 41: 6090 6095.
    • (2007) Environ Sci Technol , vol.41 , pp. 6090-6095
    • Whitman, R.L.1    Przzybyla-Kelly, K.2    Shivley, D.A.3    Byappanhalli., M.N.4
  • 39
    • 0038316485 scopus 로고    scopus 로고
    • Use of antibiotic resistance analysis for representativeness testing of multi-watershed libraries
    • Wiggins, B.A., Cash, P.W., Creamer, W.S., Dart, S.E., Garcia, P.P., Gerecke, T.M., et al. (2003) Use of antibiotic resistance analysis for representativeness testing of multi-watershed libraries. Appl Environ Microbiol 69: 3399 3405.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 3399-3405
    • Wiggins, B.A.1    Cash, P.W.2    Creamer, W.S.3    Dart, S.E.4    Garcia, P.P.5    Gerecke, T.M.6
  • 40
    • 22144460213 scopus 로고    scopus 로고
    • Quantitative detection of Legionella pneumophila in water samples by immunomagnetic purification and real-time PCR amplification of the dotA gene
    • Yáňez, M.A., Carrasco-Serrano, C., Barberá, V.M. Catálan, V. (2005) Quantitative detection of Legionella pneumophila in water samples by immunomagnetic purification and real-time PCR amplification of the dotA gene. Appl Environ Microbiol 71: 3433 3441.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 3433-3441
    • Yáňez, M.A.1    Carrasco-Serrano, C.2    Barberá, V.M.3    Catálan, V.4
  • 41
    • 35448976530 scopus 로고    scopus 로고
    • Development of a SYBR Green I real-time PCR for quantitative detection of Vibrio alginolyticus in seawater and seafood
    • Zhou, S.Z., Hou, Z., Li, N. Qin, Q. (2007) Development of a SYBR Green I real-time PCR for quantitative detection of Vibrio alginolyticus in seawater and seafood. J Appl Microbiol 103: 1897 1906.
    • (2007) J Appl Microbiol , vol.103 , pp. 1897-1906
    • Zhou, S.Z.1    Hou, Z.2    Li, N.3    Qin, Q.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.