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Volumn 3, Issue 10, 2008, Pages

HFR1 is crucial for transcriptome regulation in the cryptochrome 1-mediated early response to blue light in Arabidopsis thaliana

Author keywords

[No Author keywords available]

Indexed keywords

CRYPTOCHROME 1; LONG HYPOCOTYL IN FAR RED 1 TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR; TRANSCRIPTOME; UNCLASSIFIED DRUG; ARABIDOPSIS PROTEIN; CRYPTOCHROME; DNA BINDING PROTEIN; FLAVOPROTEIN; HFR1 PROTEIN, ARABIDOPSIS; NUCLEAR PROTEIN; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE FERRIHEMOPROTEIN REDUCTASE;

EID: 55849090312     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0003563     Document Type: Article
Times cited : (20)

References (43)
  • 1
    • 33748943849 scopus 로고    scopus 로고
    • Cryptochrome photoreceptors cry1 and cry2 antagonistically regulate primary root elongation in Arabidopsis thaliana
    • Canamero RC, Bakrim N, Bouly JP, Garay A, Dudkin EE, et al. (2006) Cryptochrome photoreceptors cry1 and cry2 antagonistically regulate primary root elongation in Arabidopsis thaliana. Planta 224: 995-1003.
    • (2006) Planta , vol.224 , pp. 995-1003
    • Canamero, R.C.1    Bakrim, N.2    Bouly, J.P.3    Garay, A.4    Dudkin, E.E.5
  • 2
    • 0033617475 scopus 로고    scopus 로고
    • Cryptochromes: Blue light receptors for plants and animals
    • Cashmore AR, Jarillo JA, Wu YJ, Liu D (1999) Cryptochromes: blue light receptors for plants and animals. Science 284: 760-765.
    • (1999) Science , vol.284 , pp. 760-765
    • Cashmore, A.R.1    Jarillo, J.A.2    Wu, Y.J.3    Liu, D.4
  • 3
    • 0141762747 scopus 로고    scopus 로고
    • Cryptochromes: Enabling plants and animals to determine circadian time
    • Cashmore AR (2003) Cryptochromes: enabling plants and animals to determine circadian time. Cell 114: 537-543.
    • (2003) Cell , vol.114 , pp. 537-543
    • Cashmore, A.R.1
  • 4
    • 24744445152 scopus 로고    scopus 로고
    • From The Cover: A role for Arabidopsis cryptochromes and COP1 in the regulation of stomatal opening
    • Mao J, Zhang YC, Sang Y, Li QH, Yang HQ (2005) From The Cover: A role for Arabidopsis cryptochromes and COP1 in the regulation of stomatal opening. Proc Natl Acad Sci U S A 102: 12270-12275.
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 12270-12275
    • Mao, J.1    Zhang, Y.C.2    Sang, Y.3    Li, Q.H.4    Yang, H.Q.5
  • 5
    • 22044436084 scopus 로고    scopus 로고
    • HYPERSENSITIVE TO RED AND BLUE 1, a ZZ-type zinc finger protein, regulates phytochrome B-mediated red and cryptochrome-mediated blue light responses
    • Kang X, Chong J, Ni M (2005) HYPERSENSITIVE TO RED AND BLUE 1, a ZZ-type zinc finger protein, regulates phytochrome B-mediated red and cryptochrome-mediated blue light responses. Plant Cell 17: 822-835.
    • (2005) Plant Cell , vol.17 , pp. 822-835
    • Kang, X.1    Chong, J.2    Ni, M.3
  • 6
    • 0038079850 scopus 로고    scopus 로고
    • HFR1, a putative bHLH transcription factor, mediates both phytochrome A and cryptochrome signalling
    • Duek PD, Fankhauser C (2003) HFR1, a putative bHLH transcription factor, mediates both phytochrome A and cryptochrome signalling. Plant J 34: 827-836.
    • (2003) Plant J , vol.34 , pp. 827-836
    • Duek, P.D.1    Fankhauser, C.2
  • 7
    • 47749128874 scopus 로고    scopus 로고
    • CRY1 inhibits COP1-mediated degradation of BIT1, a MYB transcription factor, to activate blue light-dependent gene expression in Arabidopsis
    • Hong SH, Kim HJ, Ryu JS, Choi H, Jeong S, et al. (2008) CRY1 inhibits COP1-mediated degradation of BIT1, a MYB transcription factor, to activate blue light-dependent gene expression in Arabidopsis. Plant J 55: 361-371.
    • (2008) Plant J , vol.55 , pp. 361-371
    • Hong, S.H.1    Kim, H.J.2    Ryu, J.S.3    Choi, H.4    Jeong, S.5
  • 8
    • 33745204478 scopus 로고    scopus 로고
    • KIDARI, encoding a non-DNA Binding bHLH protein, represses light signal transduction in Arabidopsis thaliana
    • Hyun Y, Lee I (2006) KIDARI, encoding a non-DNA Binding bHLH protein, represses light signal transduction in Arabidopsis thaliana. Plant Mol Biol 61: 283-296.
    • (2006) Plant Mol Biol , vol.61 , pp. 283-296
    • Hyun, Y.1    Lee, I.2
  • 9
    • 1842712611 scopus 로고    scopus 로고
    • RPT2 is a signal transducer involved in phototropic response and stomatal opening by association with phototropin 1 in Arabidopsis thaliana
    • Inada S, Ohgishi M, Mayama T, Okada K, Sakai T (2004) RPT2 is a signal transducer involved in phototropic response and stomatal opening by association with phototropin 1 in Arabidopsis thaliana. Plant Cell 16: 887-896.
    • (2004) Plant Cell , vol.16 , pp. 887-896
    • Inada, S.1    Ohgishi, M.2    Mayama, T.3    Okada, K.4    Sakai, T.5
  • 10
    • 33745435776 scopus 로고    scopus 로고
    • Arabidopsis SHORT HYPOCOTYL UNDER BLUE1 contains SPX and EXS domains and acts in cryptochrome signaling
    • Kang X, Ni M (2006) Arabidopsis SHORT HYPOCOTYL UNDER BLUE1 contains SPX and EXS domains and acts in cryptochrome signaling. Plant Cell 18: 921-934.
    • (2006) Plant Cell , vol.18 , pp. 921-934
    • Kang, X.1    Ni, M.2
  • 11
    • 0038076004 scopus 로고    scopus 로고
    • PP7 is a positive regulator of blue light signaling in Arabidopsis
    • Moller SG, Kim YS, Kunkel T, Chua NH (2003) PP7 is a positive regulator of blue light signaling in Arabidopsis. Plant Cell 15: 1111-1119.
    • (2003) Plant Cell , vol.15 , pp. 1111-1119
    • Moller, S.G.1    Kim, Y.S.2    Kunkel, T.3    Chua, N.H.4
  • 12
    • 22044446641 scopus 로고    scopus 로고
    • The Dof transcription factor OBP3 modulates phytochrome and cryptochrome signaling in Arabidopsis
    • Ward JM, Cufr CA, Denzel MA, Neff MM (2005) The Dof transcription factor OBP3 modulates phytochrome and cryptochrome signaling in Arabidopsis. Plant Cell 17: 475-485.
    • (2005) Plant Cell , vol.17 , pp. 475-485
    • Ward, J.M.1    Cufr, C.A.2    Denzel, M.A.3    Neff, M.M.4
  • 13
    • 0034665886 scopus 로고    scopus 로고
    • HFR1 encodes an atypical bHLH protein that acts in phytochrome A signal transduction
    • Fairchild CD, Schumaker MA, Quail PH (2000) HFR1 encodes an atypical bHLH protein that acts in phytochrome A signal transduction. Genes Dev 14: 2377-2391.
    • (2000) Genes Dev , vol.14 , pp. 2377-2391
    • Fairchild, C.D.1    Schumaker, M.A.2    Quail, P.H.3
  • 14
    • 0034485639 scopus 로고    scopus 로고
    • Cloning of the Arabidopsis RSF1 gene by using a mapping strategy based on high-density DNA arrays and denaturing high-performance liquid chromatography
    • Spiegelman JI, Mindrinos MN, Fankhauser C, Richards D, Lutes J, et al. (2000) Cloning of the Arabidopsis RSF1 gene by using a mapping strategy based on high-density DNA arrays and denaturing high-performance liquid chromatography. Plant Cell 12: 2485-2498.
    • (2000) Plant Cell , vol.12 , pp. 2485-2498
    • Spiegelman, J.I.1    Mindrinos, M.N.2    Fankhauser, C.3    Richards, D.4    Lutes, J.5
  • 15
    • 0034527465 scopus 로고    scopus 로고
    • REP1, a basic helix-loop-helix protein, is required for a branch pathway of phytochrome A signaling in arabidopsis
    • Soh MS, Kim YM, Han SJ, Song PS (2000) REP1, a basic helix-loop-helix protein, is required for a branch pathway of phytochrome A signaling in arabidopsis. Plant Cell 12: 2061-2074.
    • (2000) Plant Cell , vol.12 , pp. 2061-2074
    • Soh, M.S.1    Kim, Y.M.2    Han, S.J.3    Song, P.S.4
  • 16
    • 0347052754 scopus 로고    scopus 로고
    • Overexpression of a mutant basic helix-loop-helix protein HFR1, HFR1-deltaN105, activates a branch pathway of light signaling in Arabidopsis
    • Yang KY, Kim YM, Lee S, Song PS, Soh MS (2003) Overexpression of a mutant basic helix-loop-helix protein HFR1, HFR1-deltaN105, activates a branch pathway of light signaling in Arabidopsis. Plant Physiol 133: 1630-1642.
    • (2003) Plant Physiol , vol.133 , pp. 1630-1642
    • Yang, K.Y.1    Kim, Y.M.2    Lee, S.3    Song, P.S.4    Soh, M.S.5
  • 17
    • 19544376094 scopus 로고    scopus 로고
    • Light regulates COP1-mediated degradation of HFR1, a transcription factor essential for light signaling in Arabidopsis
    • Yang J, Lin R, Sullivan J, Hoecker U, Liu B, et al. (2005) Light regulates COP1-mediated degradation of HFR1, a transcription factor essential for light signaling in Arabidopsis. Plant Cell 17: 804-821.
    • (2005) Plant Cell , vol.17 , pp. 804-821
    • Yang, J.1    Lin, R.2    Sullivan, J.3    Hoecker, U.4    Liu, B.5
  • 18
    • 11144335485 scopus 로고    scopus 로고
    • The degradation of HFR1, a putative bHLH class transcription factor involved in light signaling, is regulated by phosphorylation and requires COP1
    • Duek PD, Elmer MV, van Oosten VR, Fankhauser C (2004) The degradation of HFR1, a putative bHLH class transcription factor involved in light signaling, is regulated by phosphorylation and requires COP1. Curr Biol 14: 2296-2301.
    • (2004) Curr Biol , vol.14 , pp. 2296-2301
    • Duek, P.D.1    Elmer, M.V.2    van Oosten, V.R.3    Fankhauser, C.4
  • 19
    • 4644354063 scopus 로고    scopus 로고
    • Degradation of phytochrome interacting factor 3 in phytochrome-mediated light signaling
    • Park E, Kim J, Lee Y, Shin J, Oh E, et al. (2004) Degradation of phytochrome interacting factor 3 in phytochrome-mediated light signaling. Plant Cell Physiol 45: 968-975.
    • (2004) Plant Cell Physiol , vol.45 , pp. 968-975
    • Park, E.1    Kim, J.2    Lee, Y.3    Shin, J.4    Oh, E.5
  • 20
    • 22044438957 scopus 로고    scopus 로고
    • Repression of light signaling by Arabidopsis SPA1 involves post-translational regulation of HFR1 protein accumulation
    • Yang J, Lin R, Hoecker U, Liu B, Xu L, et al. (2005) Repression of light signaling by Arabidopsis SPA1 involves post-translational regulation of HFR1 protein accumulation. Plant J 43: 131-141.
    • (2005) Plant J , vol.43 , pp. 131-141
    • Yang, J.1    Lin, R.2    Hoecker, U.3    Liu, B.4    Xu, L.5
  • 21
    • 0035542770 scopus 로고    scopus 로고
    • Light control of Arabidopsis development entails coordinated regulation of genome expression and cellular pathways
    • Ma L, Li J, Qu L, Hager J, Chen Z, et al. (2001) Light control of Arabidopsis development entails coordinated regulation of genome expression and cellular pathways. Plant Cell 13: 2589-2607.
    • (2001) Plant Cell , vol.13 , pp. 2589-2607
    • Ma, L.1    Li, J.2    Qu, L.3    Hager, J.4    Chen, Z.5
  • 22
    • 33847042609 scopus 로고    scopus 로고
    • Light-regulated transcriptional networks in higher plants
    • Jiao Y, Lau OS, Deng XW (2007) Light-regulated transcriptional networks in higher plants. Nat Rev Genet 8: 217-230.
    • (2007) Nat Rev Genet , vol.8 , pp. 217-230
    • Jiao, Y.1    Lau, O.S.2    Deng, X.W.3
  • 23
    • 0142134233 scopus 로고    scopus 로고
    • Genomic and physiological studies of early cryptochrome 1 action demonstrate roles for auxin and gibberellin in the control of hypocotyl growth by blue light
    • Folta KM, Pontin MA, Karlin-Neumann G, Bottini R, Spalding EP (2003) Genomic and physiological studies of early cryptochrome 1 action demonstrate roles for auxin and gibberellin in the control of hypocotyl growth by blue light. Plant J 36: 203-214.
    • (2003) Plant J , vol.36 , pp. 203-214
    • Folta, K.M.1    Pontin, M.A.2    Karlin-Neumann, G.3    Bottini, R.4    Spalding, E.P.5
  • 24
    • 1442281536 scopus 로고    scopus 로고
    • Functional analysis of each blue light receptor, cry1, cry2, phot1, and phot2, by using combinatorial multiple mutants in Arabidopsis
    • Ohgishi M, Saji K, Okada K, Sakai T (2004) Functional analysis of each blue light receptor, cry1, cry2, phot1, and phot2, by using combinatorial multiple mutants in Arabidopsis. Proc Natl Acad Sci U S A 101: 2223-2228.
    • (2004) Proc Natl Acad Sci U S A , vol.101 , pp. 2223-2228
    • Ohgishi, M.1    Saji, K.2    Okada, K.3    Sakai, T.4
  • 25
    • 9144221499 scopus 로고    scopus 로고
    • A genome-wide analysis of blue-light regulation of Arabidopsis transcription factor gene expression during seedling development
    • Jiao Y, Yang H, Ma L, Sun N, Yu H, et al. (2003) A genome-wide analysis of blue-light regulation of Arabidopsis transcription factor gene expression during seedling development. Plant Physiol 133: 1480-1493.
    • (2003) Plant Physiol , vol.133 , pp. 1480-1493
    • Jiao, Y.1    Yang, H.2    Ma, L.3    Sun, N.4    Yu, H.5
  • 26
    • 0035812725 scopus 로고    scopus 로고
    • Direct interaction of Arabidopsis cryptochromes with COP1 in light control development
    • Wang H, Ma LG, Li JM, Zhao HY, Deng XW (2001) Direct interaction of Arabidopsis cryptochromes with COP1 in light control development. Science 294: 154-158.
    • (2001) Science , vol.294 , pp. 154-158
    • Wang, H.1    Ma, L.G.2    Li, J.M.3    Zhao, H.Y.4    Deng, X.W.5
  • 27
    • 0033180001 scopus 로고    scopus 로고
    • The Arabidopsis blue light receptor cryptochrome 2 is a nuclear protein regulated by a blue light-dependent post-transcriptional mechanism
    • Guo H, Duong H, Ma N, Lin C (1999) The Arabidopsis blue light receptor cryptochrome 2 is a nuclear protein regulated by a blue light-dependent post-transcriptional mechanism. Plant J 19: 279-287.
    • (1999) Plant J , vol.19 , pp. 279-287
    • Guo, H.1    Duong, H.2    Ma, N.3    Lin, C.4
  • 28
    • 0037629260 scopus 로고    scopus 로고
    • An Arabidopsis protein closely related to Synechocystis cryptochrome is targeted to organelles
    • Kleine T, Lockhart P, Batschauer A (2003) An Arabidopsis protein closely related to Synechocystis cryptochrome is targeted to organelles. Plant J 35: 93-103.
    • (2003) Plant J , vol.35 , pp. 93-103
    • Kleine, T.1    Lockhart, P.2    Batschauer, A.3
  • 29
    • 0033180250 scopus 로고    scopus 로고
    • Nuclear localization of the Arabidopsis blue light receptor cryptochrome 2
    • Kleiner O, Kircher S, Harter K, Batschauer A (1999) Nuclear localization of the Arabidopsis blue light receptor cryptochrome 2. Plant J 19: 289-296.
    • (1999) Plant J , vol.19 , pp. 289-296
    • Kleiner, O.1    Kircher, S.2    Harter, K.3    Batschauer, A.4
  • 30
    • 0142134233 scopus 로고    scopus 로고
    • Genomic and physiological studies of early cryptochrome 1 action demonstrate roles for auxin and gibberellin in the control of hypocotyls growth by blue light
    • Folta KM, Pontin MA, Karlin-Neumann G, Bottini R, Spalding EP (2003) Genomic and physiological studies of early cryptochrome 1 action demonstrate roles for auxin and gibberellin in the control of hypocotyls growth by blue light. The Plant Journal 36: 203-214.
    • (2003) The Plant Journal , vol.36 , pp. 203-214
    • Folta, K.M.1    Pontin, M.A.2    Karlin-Neumann, G.3    Bottini, R.4    Spalding, E.P.5
  • 31
    • 34248152117 scopus 로고    scopus 로고
    • Cryptochrome blue light photoreceptors are activated through interconversion of flavin redox states
    • Bouly JP, Schleicher E, Dionisio-Sese M, Vandenbussche F, Van Der Straeten D, et al. (2007) Cryptochrome blue light photoreceptors are activated through interconversion of flavin redox states. J Biol Chem 282: 9383-9391.
    • (2007) J Biol Chem , vol.282 , pp. 9383-9391
    • Bouly, J.P.1    Schleicher, E.2    Dionisio-Sese, M.3    Vandenbussche, F.4    Van Der Straeten, D.5
  • 32
    • 21244502156 scopus 로고    scopus 로고
    • Light-induced electron transfer in Arabidopsis cryptochrome-1 correlates with in vivo function
    • Zeugner A, Byrdin M, Bouly JP, Bakrim N, Giovani B, et al. (2005) Light-induced electron transfer in Arabidopsis cryptochrome-1 correlates with in vivo function. J Biol Chem 280: 19437-19440.
    • (2005) J Biol Chem , vol.280 , pp. 19437-19440
    • Zeugner, A.1    Byrdin, M.2    Bouly, J.P.3    Bakrim, N.4    Giovani, B.5
  • 33
    • 25844468618 scopus 로고    scopus 로고
    • Redox homeostasis and antioxidant signaling: A metabolic interface between stress perception and physiological responses
    • Foyer CH, Noctor G (2005) Redox homeostasis and antioxidant signaling: a metabolic interface between stress perception and physiological responses. Plant Cell 17: 1866-1875.
    • (2005) Plant Cell , vol.17 , pp. 1866-1875
    • Foyer, C.H.1    Noctor, G.2
  • 34
    • 0035543363 scopus 로고    scopus 로고
    • The signaling mechanism of Arabidopsis CRY1 involves direct interaction with COP1
    • Yang HQ, Tang RH, Cashmore AR (2001) The signaling mechanism of Arabidopsis CRY1 involves direct interaction with COP1. Plant Cell 13: 2573-2587.
    • (2001) Plant Cell , vol.13 , pp. 2573-2587
    • Yang, H.Q.1    Tang, R.H.2    Cashmore, A.R.3
  • 35
    • 14644408802 scopus 로고    scopus 로고
    • HFR1 is targeted by COP1 E3 ligase for post-translational proteolysis during phytochrome A signaling
    • Jang IC, Yang JY, Seo HS, Chua NH (2005) HFR1 is targeted by COP1 E3 ligase for post-translational proteolysis during phytochrome A signaling. Genes Dev 19: 593-602.
    • (2005) Genes Dev , vol.19 , pp. 593-602
    • Jang, I.C.1    Yang, J.Y.2    Seo, H.S.3    Chua, N.H.4
  • 36
    • 0034928207 scopus 로고    scopus 로고
    • Unexpected roles for cryptochrome 2 and phototropin revealed by high-resolution analysis of blue light-mediated hypocotyl growth inhibition
    • Folta KM, Spalding EP (2001) Unexpected roles for cryptochrome 2 and phototropin revealed by high-resolution analysis of blue light-mediated hypocotyl growth inhibition. Plant J 26: 471-478.
    • (2001) Plant J , vol.26 , pp. 471-478
    • Folta, K.M.1    Spalding, E.P.2
  • 37
    • 34447115720 scopus 로고    scopus 로고
    • Genome-wide gene expression analysis reveals a critical role for CRYPTOCHROME1 in the response of Arabidopsis to high irradiance
    • Kleine T, Kindgren P, Benedict C, Hendrickson L, Strand A (2007) Genome-wide gene expression analysis reveals a critical role for CRYPTOCHROME1 in the response of Arabidopsis to high irradiance. Plant Physiol 144: 1391-1406.
    • (2007) Plant Physiol , vol.144 , pp. 1391-1406
    • Kleine, T.1    Kindgren, P.2    Benedict, C.3    Hendrickson, L.4    Strand, A.5
  • 38
    • 0042421751 scopus 로고    scopus 로고
    • The Arabidopsis basic/ helix-loop-helix transcription factor family
    • Toledo-Ortiz G, Huq E, Quail PH (2003) The Arabidopsis basic/ helix-loop-helix transcription factor family. Plant Cell 15: 1749-1770.
    • (2003) Plant Cell , vol.15 , pp. 1749-1770
    • Toledo-Ortiz, G.1    Huq, E.2    Quail, P.H.3
  • 39
    • 1842737693 scopus 로고    scopus 로고
    • TGA5 acts as a positive and TGA4 acts as a negative regulator of ocs element activity in Arabidopsis roots in response to defence signals
    • Foley RC, Singh KB (2004) TGA5 acts as a positive and TGA4 acts as a negative regulator of ocs element activity in Arabidopsis roots in response to defence signals. FEBS Lett 563: 141-145.
    • (2004) FEBS Lett , vol.563 , pp. 141-145
    • Foley, R.C.1    Singh, K.B.2
  • 40
    • 0024788938 scopus 로고
    • The ocs-element is a component of the promoters of several T-DNA and plant viral genes
    • Bouchez D, Tokuhisa JG, Llewellyn DJ, Dennis ES, Ellis JG (1989) The ocs-element is a component of the promoters of several T-DNA and plant viral genes. Embo J 8: 4197-4204.
    • (1989) Embo J , vol.8 , pp. 4197-4204
    • Bouchez, D.1    Tokuhisa, J.G.2    Llewellyn, D.J.3    Dennis, E.S.4    Ellis, J.G.5
  • 41
    • 0027493250 scopus 로고
    • HY4 gene of A. thaliana encodes a protein with characteristics of a blue-light photoreceptor
    • Ahmad M, Cashmore AR (1993) HY4 gene of A. thaliana encodes a protein with characteristics of a blue-light photoreceptor. Nature 366: 162-166.
    • (1993) Nature , vol.366 , pp. 162-166
    • Ahmad, M.1    Cashmore, A.R.2
  • 42
    • 0032126374 scopus 로고    scopus 로고
    • Adaptor ligation-based polymerase chain reaction-mediated walking
    • Padegimas LSaNAR (1998) Adaptor ligation-based polymerase chain reaction-mediated walking. Analytical Biochemistry 260: 149-153.
    • (1998) Analytical Biochemistry , vol.260 , pp. 149-153
    • Padegimas, L.S.N.A.R.1
  • 43
    • 0038444122 scopus 로고    scopus 로고
    • Genome-wide in silico identification of transcriptional regulators controlling the cell cycle in human cells
    • Elkon R, Linhart C, Sharan R, Shamir R, Shiloh Y (2003) Genome-wide in silico identification of transcriptional regulators controlling the cell cycle in human cells. Genome Res 13: 773-780.
    • (2003) Genome Res , vol.13 , pp. 773-780
    • Elkon, R.1    Linhart, C.2    Sharan, R.3    Shamir, R.4    Shiloh, Y.5


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