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Volumn 9, Issue , 2008, Pages

A MITE-based genotyping method to reveal hundreds of DNA polymorphisms in an animal genome after a few generations of artificial selection

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA;

EID: 55649109642     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-9-459     Document Type: Article
Times cited : (15)

References (36)
  • 1
    • 0347358913 scopus 로고    scopus 로고
    • The evolution of molecular markers - Just a matter of fashion?
    • 10.1038/nrg1249 14666112
    • Schlötterer C The evolution of molecular markers - just a matter of fashion? Nat Rev Genet 2004, 5:63-69. 10.1038/nrg1249 14666112
    • (2004) Nat Rev Genet , vol.5 , pp. 63-69
    • Schlötterer, C.1
  • 2
    • 0345304399 scopus 로고    scopus 로고
    • The power and promise of population genomics: From genotyping to genome typing
    • 10.1038/nrg1226 14631358
    • Luikart G England PR Tallmon D Jordan S Taberlet P The power and promise of population genomics: From genotyping to genome typing Nat Rev Genet 2003, 4:981-994. 10.1038/nrg1226 14631358
    • (2003) Nat Rev Genet , vol.4 , pp. 981-994
    • Luikart, G.1    England, P.R.2    Tallmon, D.3    Jordan, S.4    Taberlet, P.5
  • 3
    • 1642271573 scopus 로고    scopus 로고
    • SNPs in ecology, evolution and conservation
    • group atSw 10.1016/j.tree.2004.01.009
    • Morin PA Luikart G Wayne RK group atSw SNPs in ecology, evolution and conservation Trends Ecol Evol 2004, 19:208-216. 10.1016/ j.tree.2004.01.009
    • (2004) Trends Ecol Evol , vol.19 , pp. 208-216
    • Morin, P.A.1    Luikart, G.2    Wayne, R.K.3
  • 4
    • 34548555846 scopus 로고    scopus 로고
    • Cross-species transfer of nuclear microsatellite markers: Potential and limitations
    • 10.1111/j.1365-294X.2007.03439.x 17850543
    • Barbara T Palma-Silva C Paggi GM Bered F Fay MF Lexer C Cross-species transfer of nuclear microsatellite markers: Potential and limitations Mol Ecol 2007, 16:3759-3767. 10.1111/j.1365-294X.2007.03439.x 17850543
    • (2007) Mol Ecol , vol.16 , pp. 3759-3767
    • Barbara, T.1    Palma-Silva, C.2    Paggi, G.M.3    Bered, F.4    Fay, M.F.5    Lexer, C.6
  • 5
    • 0035866187 scopus 로고    scopus 로고
    • Diversity Arrays: A solid state technology for sequence information independent genotyping
    • 29632 11160945 10.1093/nar/29.4.e25
    • Jaccoud D Peng K Feinstein D Kilian A Diversity Arrays: A solid state technology for sequence information independent genotyping Nucleic Acids Res 2001, 29:e25. 29632 11160945 10.1093/nar/29.4.e25
    • (2001) Nucleic Acids Res , vol.29
    • Jaccoud, D.1    Peng, K.2    Feinstein, D.3    Kilian, A.4
  • 6
    • 3042840970 scopus 로고    scopus 로고
    • Diversity Arrays Technology (DArT) for whole-genome profiling of barley
    • 470773 15192146 10.1073/pnas.0401076101
    • Wenzl P Carling J Kudrna D Jaccoud D Huttner E Kleinhofs A Kilian A Diversity Arrays Technology (DArT) for whole-genome profiling of barley Proc Natl Acad Sci USA 2004, 101:9915-9920. 470773 15192146 10.1073/ pnas.0401076101
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 9915-9920
    • Wenzl, P.1    Carling, J.2    Kudrna, D.3    Jaccoud, D.4    Huttner, E.5    Kleinhofs, A.6    Kilian, A.7
  • 10
    • 25844445932 scopus 로고    scopus 로고
    • Validation of the high-throughput marker technology DArT using the model plant Arabidopsis thaliana
    • 10.1007/s00438-005-1145-6 15937704
    • Wittenberg A Lee T Cayla C Kilian A Visser R Schouten H Validation of the high-throughput marker technology DArT using the model plant Arabidopsis thaliana Mol Genet Genomics 2005, 274:30-39. 10.1007/ s00438-005-1145-6 15937704
    • (2005) Mol Genet Genomics , vol.274 , pp. 30-39
    • Wittenberg, A.1    Lee, T.2    Cayla, C.3    Kilian, A.4    Visser, R.5    Schouten, H.6
  • 11
    • 33746448684 scopus 로고    scopus 로고
    • Low level of genetic diversity in cultivated pigeonpea compared to its wild relatives is revealed by diversity arrays technology
    • 10.1007/s00122-006-0317-z 16845522
    • Yang S Pang W Ash G Harper J Carling J Wenzl P Huttner E Zong X Kilian A Low level of genetic diversity in cultivated pigeonpea compared to its wild relatives is revealed by diversity arrays technology Theor Appl Genet 2006, 113:585-595. 10.1007/s00122-006-0317-z 16845522
    • (2006) Theor Appl Genet , vol.113 , pp. 585-595
    • Yang, S.1    Pang, W.2    Ash, G.3    Harper, J.4    Carling, J.5    Wenzl, P.6    Huttner, E.7    Zong, X.8    Kilian, A.9
  • 13
    • 4444321387 scopus 로고    scopus 로고
    • Yellow fever: The recurring plague
    • 10.1080/10408360490497474 15487593
    • Tomori O Yellow fever: The recurring plague Crit Rev Clin Lab Sci 2004, 41:391-427. 10.1080/10408360490497474 15487593
    • (2004) Crit Rev Clin Lab Sci , vol.41 , pp. 391-427
    • Tomori, O.1
  • 14
    • 34548084530 scopus 로고    scopus 로고
    • Bacillus thuringiensis serovariety israelensis and Bacillus sphaericus for mosquito control
    • 10.2987/8756-971X(2007)23[133:BTSIAB]2.0.CO;2 17853604
    • Lacey LA Bacillus thuringiensis serovariety israelensis and Bacillus sphaericus for mosquito control J Am Mosq Control Assoc 2007, 23:133-163. 10.2987/8756-971X(2007)23[133:BTSIAB]2.0.CO;2 17853604
    • (2007) J Am Mosq Control Assoc , vol.23 , pp. 133-163
    • Lacey, L.A.1
  • 15
    • 0033865081 scopus 로고    scopus 로고
    • Molecular and evolutionary analysis of two divergent subfamilies of a novel miniature inverted repeat transposable element in the yellow fever mosquito, Aedes aegypti
    • 10958848
    • Tu ZJ Molecular and evolutionary analysis of two divergent subfamilies of a novel miniature inverted repeat transposable element in the yellow fever mosquito, Aedes aegypti Mol Biol Evol 2000, 17:1313-1325. 10958848
    • (2000) Mol Biol Evol , vol.17 , pp. 1313-1325
    • Tu, Z.J.1
  • 16
    • 7044264955 scopus 로고    scopus 로고
    • How to track and assess genotyping errors in population genetics studies
    • 10.1111/j.1365-294X.2004.02346.x 15487987
    • Bonin A Bellemain E Bronken Eidesen P Pompanon F Brochmann C Taberlet P How to track and assess genotyping errors in population genetics studies Mol Ecol 2004, 13:3261-3273. 10.1111/j.1365-294X.2004.02346.x 15487987
    • (2004) Mol Ecol , vol.13 , pp. 3261-3273
    • Bonin, A.1    Bellemain, E.2    Bronken Eidesen, P.3    Pompanon, F.4    Brochmann, C.5    Taberlet, P.6
  • 17
    • 33748586768 scopus 로고    scopus 로고
    • Molecular marker systems in insects: Current trends and future avenues
    • 10.1111/j.1365-294X.2006.03014.x 16968257
    • Behura SK Molecular marker systems in insects: Current trends and future avenues Mol Ecol 2006, 15:3087-3113. 10.1111/j.1365-294X.2006.03014.x 16968257
    • (2006) Mol Ecol , vol.15 , pp. 3087-3113
    • Behura, S.K.1
  • 18
    • 35448968774 scopus 로고    scopus 로고
    • Phylogeography of Iris missouriensis (Iridaceae) based on nuclear and chloroplast markers
    • 10.1111/j.1365-294X.2007.03525.x 17908219
    • Cornman RS Arnold ML Phylogeography of Iris missouriensis (Iridaceae) based on nuclear and chloroplast markers Mol Ecol 2007, 16:4585-4598. 10.1111/j.1365-294X.2007.03525.x 17908219
    • (2007) Mol Ecol , vol.16 , pp. 4585-4598
    • Cornman, R.S.1    Arnold, M.L.2
  • 19
    • 0034160156 scopus 로고    scopus 로고
    • Transposable elements and host genome evolution
    • 10.1016/S0169-5347(99)01817-0 10675923
    • Kidwell MG Lisch DR Transposable elements and host genome evolution Trends Ecol Evol 2000, 15:95-99. 10.1016/S0169-5347(99)01817-0 10675923
    • (2000) Trends Ecol Evol , vol.15 , pp. 95-99
    • Kidwell, M.G.1    Lisch, D.R.2
  • 20
    • 0037633476 scopus 로고    scopus 로고
    • Plant LTR-retrotransposons and MITEs: Control of transposition and impact on the evolution of plant genes and genomes
    • 10.1016/S0378-1119(03)00557-2 12853133
    • Casacuberta JM Santiago N Plant LTR-retrotransposons and MITEs: Control of transposition and impact on the evolution of plant genes and genomes Gene 2003, 311:1-11. 10.1016/S0378-1119(03)00557-2 12853133
    • (2003) Gene , vol.311 , pp. 1-11
    • Casacuberta, J.M.1    Santiago, N.2
  • 21
    • 1542321148 scopus 로고    scopus 로고
    • Using rice to understand the origin and amplification of miniature inverted repeat transposable elements (MITEs)
    • 10.1016/j.pbi.2004.01.004 15003209
    • Jiang N Feschotte C Zhang XY Wessler SR Using rice to understand the origin and amplification of miniature inverted repeat transposable elements (MITEs) Curr Opin Plant Biol 2004, 7:115-119. 10.1016/ j.pbi.2004.01.004 15003209
    • (2004) Curr Opin Plant Biol , vol.7 , pp. 115-119
    • Jiang, N.1    Feschotte, C.2    Zhang, X.Y.3    Wessler, S.R.4
  • 22
    • 0036250001 scopus 로고    scopus 로고
    • Plant transposable elements: Where genetics meets genomics
    • 10.1038/nrg793 11988759
    • Feschotte C Jiang N Wessler SR Plant transposable elements: Where genetics meets genomics Nat Rev Genet 2002, 3:329-341. 10.1038/nrg793 11988759
    • (2002) Nat Rev Genet , vol.3 , pp. 329-341
    • Feschotte, C.1    Jiang, N.2    Wessler, S.R.3
  • 24
    • 0032951187 scopus 로고    scopus 로고
    • Short inverted-repeat transposable elements in teleost fish and implications for a mechanism of their amplification
    • 10.1007/PL00006440 9873073
    • Izsvák Z Ivics Z Shimoda N Mohn D Okamoto H Hackett PB Short inverted-repeat transposable elements in teleost fish and implications for a mechanism of their amplification J Mol Evol 1999, 48:13-21. 10.1007/PL00006440 9873073
    • (1999) J Mol Evol , vol.48 , pp. 13-21
    • Izsvák, Z.1    Ivics, Z.2    Shimoda, N.3    Mohn, D.4    Okamoto, H.5    Hackett, P.B.6
  • 25
    • 0035800472 scopus 로고    scopus 로고
    • Identification of a gene associated with bit resistance in Heliothis virescens
    • 10.1126/science.1060949 11486086
    • Gahan LJ Gould F Heckel DG Identification of a gene associated with bit resistance in Heliothis virescens Science 2001, 293:857-860. 10.1126/ science.1060949 11486086
    • (2001) Science , vol.293 , pp. 857-860
    • Gahan, L.J.1    Gould, F.2    Heckel, D.G.3
  • 26
    • 0027616720 scopus 로고
    • Transposable elements as initiators of insecticide resistance
    • 8391554
    • Wilson TG Transposable elements as initiators of insecticide resistance J Econ Entomol 1993, 86:645-651. 8391554
    • (1993) J Econ Entomol , vol.86 , pp. 645-651
    • Wilson, T.G.1
  • 27
    • 14844313712 scopus 로고    scopus 로고
    • Using genome scans of DNA polymorphism to infer adaptive population divergence
    • 10.1111/j.1365-294X.2005.02437.x 15723660
    • Storz JF Using genome scans of DNA polymorphism to infer adaptive population divergence Mol Ecol 2005, 14:671-688. 10.1111/ j.1365-294X.2005.02437.x 15723660
    • (2005) Mol Ecol , vol.14 , pp. 671-688
    • Storz, J.F.1
  • 28
    • 55649105773 scopus 로고    scopus 로고
    • Long lasting persistence of Bacillus thuringiensis israelensis spores in mosquitoes' natural habitats
    • 2563433 18941501
    • Tilquin M Paris M Reynaud S Després L Ravanel P Gérémia R Gury J Long lasting persistence of Bacillus thuringiensis israelensis spores in mosquitoes' natural habitats PLoS ONE 2563433 18941501
    • PLoS ONE
    • Tilquin, M.1    Paris, M.2    Reynaud, S.3    Després, L.4    Ravanel, P.5    Gérémia, R.6    Gury, J.7
  • 29
    • 0034029317 scopus 로고    scopus 로고
    • Differential toxicity of leaf litter to dipteran larvae of mosquito developmental sites
    • 10.1006/jipa.1999.4886 10631052
    • David JP Rey D Pautou MP Meyran JC Differential toxicity of leaf litter to dipteran larvae of mosquito developmental sites J Invertebr Pathol 2000, 75:9-18. 10.1006/jipa.1999.4886 10631052
    • (2000) J Invertebr Pathol , vol.75 , pp. 9-18
    • David, J.P.1    Rey, D.2    Pautou, M.P.3    Meyran, J.C.4
  • 31
    • 84856043672 scopus 로고
    • A mathematical theory of communication
    • Shannon CE A mathematical theory of communication Bell System Technical Journal 1948, 27:379-423.
    • (1948) Bell System Technical Journal , vol.27 , pp. 379-423
    • Shannon, C.E.1
  • 33
    • 0033150530 scopus 로고    scopus 로고
    • Estimating population structure in diploids with multilocus dominant DNA markers
    • 10.1046/j.1365-294x.1999.00620.x 10434412
    • Zhivotovsky LA Estimating population structure in diploids with multilocus dominant DNA markers Mol Ecol 1999, 8:907-913. 10.1046/ j.1365-294x.1999.00620.x 10434412
    • (1999) Mol Ecol , vol.8 , pp. 907-913
    • Zhivotovsky, L.A.1
  • 34
    • 0036007449 scopus 로고    scopus 로고
    • Data from amplified fragment length polymorphism (AFLP) markers show indication of size homoplasy and of a relationship between degree of homoplasy and fragment size
    • 10.1046/j.0962-1083.2001.01415.x 11903911
    • Vekemans X Beauwens T Lemaire M Roldan-Ruiz I Data from amplified fragment length polymorphism (AFLP) markers show indication of size homoplasy and of a relationship between degree of homoplasy and fragment size Mol Ecol 2002, 11:139-151. 10.1046/j.0962-1083.2001.01415.x 11903911
    • (2002) Mol Ecol , vol.11 , pp. 139-151
    • Vekemans, X.1    Beauwens, T.2    Lemaire, M.3    Roldan-Ruiz, I.4
  • 35
    • 0006919926 scopus 로고
    • Analysis of gene diversity in subdivided populations
    • 427228 4519626 10.1073/pnas.70.12.3321
    • Nei M Analysis of gene diversity in subdivided populations Proc Natl Acad Sci USA 1973, 70:3321-3323. 427228 4519626 10.1073/pnas.70.12.3321
    • (1973) Proc Natl Acad Sci USA , vol.70 , pp. 3321-3323
    • Nei, M.1
  • 36
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin ver. 3.0: An integrated software package for population genetics data analysis
    • Excoffier L Laval G Schneider S Arlequin ver. 3.0: An integrated software package for population genetics data analysis Evol Bioinform Online 2005, 1:47-50.
    • (2005) Evol Bioinform Online , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3


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