Dynamic observation of 2686 bp DNA-BAL 31 nuclease interaction with single molecule level using high-speed atomic force microscopy

Japanese Journal of Applied Physics

Volumn 47, Issue 7 PART 3, 2008, Pages 6168-6172

  Sugasawa, Hiroaki ^a   Sugiyama, Yukihiro ^a   Morii, Takashi ^a   Okada, Takao ^a  

^a Research Institute of Biomolecule Metrology   (Japan)

Author keywords

AFM; BAL 31 nuclease; Digestion; DNA; Dynamics; Enzyme; High speed AFM; Interactions; Real time imaging

Indexed keywords

ATOMIC PHYSICS; ATOMS; BIOLOGICAL MATERIALS PRESERVATION; BIOMOLECULES; BIOSENSORS; CONFORMATIONS; DNA; ENZYMES; FLOW INTERACTIONS; GENES; MICROSCOPIC EXAMINATION; MOLECULES; NUCLEIC ACIDS; ORGANIC ACIDS; SCANNING PROBE MICROSCOPY; SPEED;

AFM; BAL 31 NUCLEASE; DIGESTION; HIGH-SPEED AFM; INTERACTIONS; REAL-TIME IMAGING;

ATOMIC FORCE MICROSCOPY;

EID: 55149117772     PISSN: 00214922     EISSN: 13474065     Source Type: Journal    
DOI: 10.1143/JJAP.47.6168     Document Type: Article

References (17)

1. G. Binnig, C. F. Quate, and Ch. Gerber: Phys. Rev, Lett. 56 (1986) 930.
2. P. K. Hansma, V. B. Elings, O. Marti, and C. E. Bracken Science 242 (1988) 209.
3. P. K. Hansma, J. P. Cleveland, M. Radmacher, D. A. Walters, P. E. Hillner, M. Bezanilla, M. Fritz, D. Vie, H. G. Hansma, C. B. Prater, J. Massie, L. Fukunaga, J. Gurley, and V. Elings: Appl. Phys, Lett. 64 (1994) 1738.
4. M. Bezanilla, B. Drake, E. Nudler, M. Kashlev, P. K. Hansma, and H. G. Hansma: Biophys. J. 67 (1994) 2454.
5. D. A. Erie, G. Yang, H. C. Schultz, and C. Bustamante: Science 266 (1994) 1562.
6. H. G. Hansma, D. E. Laney, M. Bezanilla, R. L. Sinsheimer, and P. K. Hansma: Biophys. J. 68 (1995) 1672.
7. K. Hori, T. Takahashi, and T. Okada: Eur. Biophys. J. 27 (1998) 63.
8. W. A. Rees, R. W. Keller, J. P. Vesenka, C. Yang, and C. Bustamante: Science 260 (1993) 1646.
9. C. Wyman, E. Grotkopp, C. Bustamante, and H. Nelson: EMBO J. 14 (1995) 117.
10. M. Kitazawa, K. Shiotani, and A. Toda: Jpn. J. Appl. Phys. 42 (2003) 4844.
11. J. L. Hutter and J. Bechhoefer: Rev, Sci. Instrum. 64 (1993) 1868.
12. T. Ando, N. Kodera, E. Takai, D. Maruyama, K. Saito, and A. Toda: Proc, Natl, Acad, Sci. U.S.A. 98 (2001) 12468.
13. M. Yokokawa, C. Wada, T. Ando, N. Sakai, A. Yagi, S. H. Yoshimura, and K. Takeyasu: EMBO J. 25 (2006) 4567.
14. H. Sugasawa, Y. Sugiyama, T. Morii, and T. Okada: to be submitted to Jpn. J. Appl. Phys.
15. M. Kobayashi, K. Sumitomo, and K. Torimitsu: Ultramicroscopy 107 (2007) 184.
16. N. Crampton, M. Yokokawa, D. F. Dryden, J. M. Edwardson, D. N. Nao, K. Takeyasu, S. H. Yoshimura, and R. M. Henderson: Proc. Natl. Acad. Sci. U.S.A. 104 (2007) 12755.
17. H. B. Gray: in Gene Amplification and Analysis, ed. J. G. Chirikjian and T. S. Papas (Elsevier, Amsterdam, 1982) Vol. 2, p. 169.