메뉴 건너뛰기




Volumn 1240, Issue , 2008, Pages 12-21

Population-based association study and contrasting linkage disequilibrium pattern reveal genetic association of SLC6A4 with autism in the Indian population from West Bengal

Author keywords

Autism; Case control analysis; Genetic association; Indian population; Linkage disequilibrium; Serotonin transporter

Indexed keywords

SEROTONIN TRANSPORTER;

EID: 54949116893     PISSN: 00068993     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.brainres.2008.08.063     Document Type: Article
Times cited : (16)

References (52)
  • 2
    • 33745028902 scopus 로고    scopus 로고
    • A family-based study of Indian subjects from Kolkata reveals allelic association of the serotonin transporter intron-2 (STin2) polymorphism and attention-deficit-hyperactivity disorder (ADHD)
    • Banerjee E., Sinha S., Chatterjee A., Gangopadhyay P.K., Singh M., and Nandagopal K. A family-based study of Indian subjects from Kolkata reveals allelic association of the serotonin transporter intron-2 (STin2) polymorphism and attention-deficit-hyperactivity disorder (ADHD). Am. J. Med. Genet. Part B Neuropsychiatr. Genet. 141 (2006) 361-366
    • (2006) Am. J. Med. Genet. Part B Neuropsychiatr. Genet. , vol.141 , pp. 361-366
    • Banerjee, E.1    Sinha, S.2    Chatterjee, A.3    Gangopadhyay, P.K.4    Singh, M.5    Nandagopal, K.6
  • 3
    • 13444269543 scopus 로고    scopus 로고
    • Haploview: analysis and visualization of LD and haplotype maps
    • Barrett J.C., Fry B., Maller J., and Daly M.J. Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 21 (2005) 263-265
    • (2005) Bioinformatics , vol.21 , pp. 263-265
    • Barrett, J.C.1    Fry, B.2    Maller, J.3    Daly, M.J.4
  • 4
    • 0032993895 scopus 로고    scopus 로고
    • Presence of multiple functional polyadenylation signals and a single nucleotide polymorphism in the 3′ untranslated region of the human serotonin transporter gene
    • Battersby S., Ogilvie A.D., Blackwood D.H., Shen S., Muqit M.M., Muir W.J., Teague P., Goodwin G.M., and Harmar A.J. Presence of multiple functional polyadenylation signals and a single nucleotide polymorphism in the 3′ untranslated region of the human serotonin transporter gene. Neurochem. 72 (1999) 1384-1388
    • (1999) Neurochem. , vol.72 , pp. 1384-1388
    • Battersby, S.1    Ogilvie, A.D.2    Blackwood, D.H.3    Shen, S.4    Muqit, M.M.5    Muir, W.J.6    Teague, P.7    Goodwin, G.M.8    Harmar, A.J.9
  • 8
    • 2342520299 scopus 로고    scopus 로고
    • Serotonin transporter gene and autism: a haplotype analysis in an Irish autistic population
    • Conroy J., Meally E., Kearney G., Fitzgerald M., Gill M., and Gallagher L. Serotonin transporter gene and autism: a haplotype analysis in an Irish autistic population. Mol. Psychiatry 9 (2004) 587-593
    • (2004) Mol. Psychiatry , vol.9 , pp. 587-593
    • Conroy, J.1    Meally, E.2    Kearney, G.3    Fitzgerald, M.4    Gill, M.5    Gallagher, L.6
  • 13
    • 0029823635 scopus 로고    scopus 로고
    • Systematic screening for mutations in the coding region of the human serotonin transporter (5-HTT) gene using PCR and DGGE
    • Di Bella D., Catalano M., Balling U., Smeraldi E., and Lesch K.P. Systematic screening for mutations in the coding region of the human serotonin transporter (5-HTT) gene using PCR and DGGE. Am. J. Med. Genet. 67 (1996) 541-545
    • (1996) Am. J. Med. Genet. , vol.67 , pp. 541-545
    • Di Bella, D.1    Catalano, M.2    Balling, U.3    Smeraldi, E.4    Lesch, K.P.5
  • 14
    • 41649094148 scopus 로고    scopus 로고
    • Likelihood-based association analysis for nuclear families and unrelated subjects with missing genotype data.
    • Dudbridge F. Likelihood-based association analysis for nuclear families and unrelated subjects with missing genotype data. Hum. Hered. 66 (2008) 87-98
    • (2008) Hum. Hered. , vol.66 , pp. 87-98
    • Dudbridge, F.1
  • 16
    • 0032841176 scopus 로고    scopus 로고
    • An intronic polymorphic domain often associated with susceptibility to affective disorders has allele dependent differential enhancer activity in embryonic stem cells
    • Fiskerstrand C.E., Lovejoy E.A., and Quinn J.P. An intronic polymorphic domain often associated with susceptibility to affective disorders has allele dependent differential enhancer activity in embryonic stem cells. F.E.B.S. Lett. 458 (1999) 171-174
    • (1999) F.E.B.S. Lett. , vol.458 , pp. 171-174
    • Fiskerstrand, C.E.1    Lovejoy, E.A.2    Quinn, J.P.3
  • 17
    • 0029068850 scopus 로고
    • Linkage mapping of serotonin transporter protein gene SLC6A4 on chromosome 17
    • Gelernter J., Pakstis A.J., and Kidd K.K. Linkage mapping of serotonin transporter protein gene SLC6A4 on chromosome 17. Hum. Genet. 95 (1995) 677-680
    • (1995) Hum. Genet. , vol.95 , pp. 677-680
    • Gelernter, J.1    Pakstis, A.J.2    Kidd, K.K.3
  • 18
    • 0031441095 scopus 로고    scopus 로고
    • Serotonin transporter protein (SLC6A4) allele and haplotype frequencies and linkage disequilibria in African- and European-American and Japanese populations and in alcohol-dependent subjects
    • Gelernter J., Kranzler H., and Cubells J.F. Serotonin transporter protein (SLC6A4) allele and haplotype frequencies and linkage disequilibria in African- and European-American and Japanese populations and in alcohol-dependent subjects. Hum. Genet. 101 (1997) 243-246
    • (1997) Hum. Genet. , vol.101 , pp. 243-246
    • Gelernter, J.1    Kranzler, H.2    Cubells, J.F.3
  • 27
  • 30
    • 0023796209 scopus 로고
    • On measures of gametic disequilibrium
    • Lewontin R. On measures of gametic disequilibrium. Genetics 120 (1988) 849-852
    • (1988) Genetics , vol.120 , pp. 849-852
    • Lewontin, R.1
  • 31
    • 0037270399 scopus 로고    scopus 로고
    • The serotonin transporter intronic VNTR enhancer correlated with a predisposition to affective disorders has distinct regulatory elements within the domain based on the primary DNA sequence of the repeat unit
    • Lovejoy E.A., Scott A.C., Fiskerstrand C.E., Bubb V.J., and Quinn J.P. The serotonin transporter intronic VNTR enhancer correlated with a predisposition to affective disorders has distinct regulatory elements within the domain based on the primary DNA sequence of the repeat unit. Eur. J. Neurosci. 17 (2003) 417-420
    • (2003) Eur. J. Neurosci. , vol.17 , pp. 417-420
    • Lovejoy, E.A.1    Scott, A.C.2    Fiskerstrand, C.E.3    Bubb, V.J.4    Quinn, J.P.5
  • 32
    • 0033569931 scopus 로고    scopus 로고
    • Serotonin transporter (5-HTT) and gamma-aminobutyric acid receptor subunit beta3 (GABRB3) gene polymorphisms are not associated with autism in the IMGSA families. the International Molecular Genetic Study of Autism Consortium
    • Maestrini E., Lai C., Marlow A., Matthews N., Wallace S., Bailey A., Cook E.H., Weeks D.E., and Monaco A.P. Serotonin transporter (5-HTT) and gamma-aminobutyric acid receptor subunit beta3 (GABRB3) gene polymorphisms are not associated with autism in the IMGSA families. the International Molecular Genetic Study of Autism Consortium. Am. J. Med. Genet. B Neuropsychiatr. Genet. 88 (1999) 492-496
    • (1999) Am. J. Med. Genet. B Neuropsychiatr. Genet. , vol.88 , pp. 492-496
    • Maestrini, E.1    Lai, C.2    Marlow, A.3    Matthews, N.4    Wallace, S.5    Bailey, A.6    Cook, E.H.7    Weeks, D.E.8    Monaco, A.P.9
  • 38
    • 12244264435 scopus 로고    scopus 로고
    • Genetic power calculator: design of linkage and association genetic mapping studies of complex traits
    • Purcell S., Cherny S.S., and Sham P.C. Genetic power calculator: design of linkage and association genetic mapping studies of complex traits. Bioinformatics 19 (2003) 149-150
    • (2003) Bioinformatics , vol.19 , pp. 149-150
    • Purcell, S.1    Cherny, S.S.2    Sham, P.C.3
  • 41
    • 0003252192 scopus 로고    scopus 로고
    • Isolation of high molecular weight DNA from mammalian cells using proteinase K and phenol
    • Cold Spring Harbor Laboratory Press, New York
    • Sambrook J., and Russell D.W. Isolation of high molecular weight DNA from mammalian cells using proteinase K and phenol. Molecular Cloning: A Laboratory Manual Vol. 1 (2001), Cold Spring Harbor Laboratory Press, New York 6.0-6.64
    • (2001) Molecular Cloning: A Laboratory Manual , vol.1
    • Sambrook, J.1    Russell, D.W.2
  • 42
    • 0000526929 scopus 로고
    • Studies on 5-hydroxyindole metabolism in autistic and other mentally retarded children
    • Schain R.J., and Freedman D.X. Studies on 5-hydroxyindole metabolism in autistic and other mentally retarded children. J. Pediatr. 58 (1961) 315-320
    • (1961) J. Pediatr. , vol.58 , pp. 315-320
    • Schain, R.J.1    Freedman, D.X.2
  • 44
    • 0028909113 scopus 로고
    • Monte Carlo tests for associations between disease and alleles at highly polymorphic loci
    • Sham P.C., and Curtis D. Monte Carlo tests for associations between disease and alleles at highly polymorphic loci. Ann. Hum. Genet. 59 (1995) 97-105
    • (1995) Ann. Hum. Genet. , vol.59 , pp. 97-105
    • Sham, P.C.1    Curtis, D.2
  • 45
    • 0027377799 scopus 로고
    • Transmission test for linkage disequilibrium: the insulin gene region and insulin-dependent diabetes mellitus (IDDM)
    • Spielman R.S., McGinnis R.E., and Ewens W.J. Transmission test for linkage disequilibrium: the insulin gene region and insulin-dependent diabetes mellitus (IDDM). Am. J. Hum. Genet. 52 (1993) 506-516
    • (1993) Am. J. Hum. Genet. , vol.52 , pp. 506-516
    • Spielman, R.S.1    McGinnis, R.E.2    Ewens, W.J.3
  • 48
    • 0003377384 scopus 로고    scopus 로고
    • Population genetic analysis of co-dominant and dominant markers and quantitative traits
    • Yeh F.C., and Boyle T.J.B. Population genetic analysis of co-dominant and dominant markers and quantitative traits. Belgian J. Botany 129 (1997) 157
    • (1997) Belgian J. Botany , vol.129 , pp. 157
    • Yeh, F.C.1    Boyle, T.J.B.2
  • 51
    • 33646028514 scopus 로고    scopus 로고
    • Contrasting linkage-disequilibrium patterns between cases and controls as a novel association-mapping method
    • Zaykin D.V., Meng Z., and Ehm M.G. Contrasting linkage-disequilibrium patterns between cases and controls as a novel association-mapping method. Am. J. Hum. Genet. 78 (2006) 737-746
    • (2006) Am. J. Hum. Genet. , vol.78 , pp. 737-746
    • Zaykin, D.V.1    Meng, Z.2    Ehm, M.G.3
  • 52
    • 0032904498 scopus 로고    scopus 로고
    • 5-HTTLPR variants not associated with autistic spectrum disorders
    • Zhong N., Ye L., Ju W., Tsiouris J., Cohen I., and Brown W.T. 5-HTTLPR variants not associated with autistic spectrum disorders. Neurogenetics 2 (1999) 129-131
    • (1999) Neurogenetics , vol.2 , pp. 129-131
    • Zhong, N.1    Ye, L.2    Ju, W.3    Tsiouris, J.4    Cohen, I.5    Brown, W.T.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.