Resistance of Pinus taeda families under artificial inoculations with diverse fusiform rust pathogen populations and comparison with field trials

Canadian Journal of Forest Research

Volumn 38, Issue 10, 2008, Pages 2687-2696

  Isik, Fikret ^a   Amerson, Henry V ^a   Whetten, Ross W ^a   Garcia, Saul A ^a   Li, Bailian ^a,b   McKeand, Steven E ^a  

^a NORTH CAROLINA STATE UNIVERSITY   (United States)

^b Cooperative Tree Improvement ^*

Author keywords

[No Author keywords available]

Indexed keywords

ARTIFICIAL INOCULATIONS; FIELD TRIALS; FUSIFORM RUSTS; FUSIFORME; GENETIC DIFFERENCES; INOCULA; PATHOGEN POPULATIONS; PINUS TAEDA L.; TOTAL VARIATIONS;

FLOW INTERACTIONS;

COMPARATIVE STUDY; CONIFEROUS TREE; DISEASE RESISTANCE; FUNGUS; HERITABILITY;

CRONARTIUM QUERCUUM; PINUS TAEDA;

EID: 54349086652     PISSN: 00455067     EISSN: None     Source Type: Journal    
DOI: 10.1139/X08-111     Document Type: Article

References (41)

1. Amerson, H.V., Kubisiak, T.L., Garcia, S.A., Kuhlman, E.G., Nelson, C.D., and McKeand, S.E. Mullin, T.J., and Li, B. (2005) Interacting genes in the pine-fusiform rust forest pathosystem. In Proccedings of the 28th Southern Forest Tree Improvement Conference, 21-23 June 2005, Raleigh, N.C. Edited by S.E. McKeand and B. Li. p. 60. Available from http://www.rngr.net/Publications/sftic/2005 [accessed 8 September 2008].
2. Anderson, R.L., McClure, J.P., Cost, N.D., and Uhler, R.J. 1986. Estimating fusiform rust losses in five southeast states. South. J. Appl. For. 10: 237-240.
3. Browne, W.J., Subramanian, S.V., Jones, K., and Goldstein, H. 2005. Variance partitioning in multilevel logistic models that exhibit overdispersion. J. R. Stat. Soc. [Ser. A], 168: 599-613. doi:10.1111/j.1467-985X.2004. 00365.x.
4. Cubbage, F., Pye, J., Holmes, T., and Wagner, J. 2000. An economic analysis of fusiform rust protection research. South. J. Appl. For. 24: 77-85.
5. Falconer, D.S., and Mackay, T.F.C. 1996. Introduction to quantitative genetics. 4th ed. Longman Group Ltd, Essex, UK.
6. Gilmour, A.R., Anderson, R.D., and Rae, A.L. 1985. The analysis of binomial data by a generalized linear mixed model. Biometrika, 72: 593-599. doi:10.1093/biomet/72.3.593.
7. Gilmour, A.R., Anderson, R.D., and Rae, A.L. 1987. Variance components on an underlying scale for ordered multiple threshold categorical data using a generalized linear mixed model. J. Anim. Breed. Genet. 104: 149-155.
8. Goldstein, H., Browne, W.J., and Rasbash, J. 2002. Partitioning variation in multilevel models. Understand. Statist. 1: 223-231. doi:10.1207/S15328031US0104_02.
9. Isik, F., Goldfarb, B., LeBude, A., Li, B., and McKeand, S. 2005. Predicted genetic gains and testing efficiency from two loblolly pine clonal trials. Can. J. For. Res. 35: 1754-1766. doi:10.1139/x05-064.
10. Isik, F., Gumpertz, M., Li, B., Goldfarb, B., and Sun, X. 2008. Analysis of cellulose microfibril angle (MFA) using a linear mixed model in Pinus taeda clones. Can. J. For. Res. 38: 1676-1689. doi:10.1139/X08-010.
11. Kang, M.S., and Magari, R. 1996. New developments in selecting for phenotypic stability in crop breeding. In genotype by environment interaction. Edited by M.S. Kang and H.G. Gauch Jr. CRC Press, Boca Raton, Fla. pp. 1-14.
12. Kinloch, B.B., and Stonecypher, R.W. 1969. Genetic variation in susceptibility to fusiform rust in seedlings from a wild population of loblolly pine. Phytopathology, 59: 1246-1255.
13. Kinloch, B.B., and Walkinshaw, C.H. 1991. Resistance to fusiform rust in southern pines: how is it inherited? In Rusts of Pine. Proceedings IUFRO Rusts of Pine Working Party Conference. Edited by Y. Hiratsuka et al. For. Can. Northwest. Reg. Info. Rep. NOR-X-317, Edmonton, Alta. pp. 219-228.
14. Knighten, J.L., Young, C.H., McCartney, T.C., and Anderson, R.L. 1988. Resistance screening center procedures manual: a step by step guide used in the operational screening of southern pines for resistance to fusiform rust. USDA For. Serv. For. Pest Manage. Rep. 83-1-18 [revised 1988].
15. Kuhlman, E.G. 1992. Interaction of virulent single-gall isolates of Cronartium quercuum f.sp. fusiforme and resistant families of loblolly pine. For. Sci. 38: 641-651.
16. Kuhlman, E.G., and Powers, H.R., Jr. 1988. Resistance responses in half-sib loblolly pine progenies after inoculation with Cronartium quercuum f.sp. fusiforme. Phytopathology, 78: 484-487. doi:10.1094/Phyto-78-484.
17. Kuhlman, E.G., and Matthews, F.R. 1993. Variation in virulence among single-aeciospore isolates from single-gall isolates of Cronartium quercuum f.sp. fusiforme. Can. J. For. Res. 23: 67-71. doi:10.1139/x93-011.
18. Kuhlman, E.G., Amerson, H.V., Jordan, A.P., and Pepper, W.D. 1997. Inoculum density and expression of major gene resistance to fusiform rust disease in loblolly pine. Plant Dis. 81: 597-600. doi:10.1094/PDIS.1997. 81.6.597.
19. Li, H. 2003. Major gene detection for fusiform rust resistance using segregation analysis and linkage analysis in loblolly pine. Ph.D. thesis, North Carolina State University, Raleigh, N.C.
20. Li, B., and McKeand, S.E. 1989. Stability of loblolly pine families in the southeastern U.S. Silvae Genet. 38: 96-101.
21. Li, H., Ghosh, S., Amerson, H., and Li, B. 2006. Major gene detection for fusiform rust resistance using Bayesian complex segregation analysis in loblolly pine. Theor. Appl. Genet. 113: 921-929. doi:10.1007/s00122-006- 0351-x. PMID:16896716.
22. Lynch, M., and Walsh, B. 1998. Genetics and analysis of quantitative traits. Sinauer Associates, Inc., Sunderland, Mass.
23. McKeand, S., Li, B., and Amerson, H.V. 1999. Genetic variation in fusiform rust resistance in loblolly pine across a wide geographic range. Silvae Genet. 48: 255-260.
24. McKeand, S.E., Amerson, H.V., Li, B., and Mullin, T.J. 2003. Families of loblolly pine that are the most stable for resistance to fusiform rust are the least predictable. Can. J. Res. 33: 1335-1339. doi:10.1139/x03-050.
25. McKeand, S.E., Li, B., Grissom, J.E., Isik, F., and Jayawickrama, K.J.S. 2008. Genetic parameter estimates for growth traits from diallel tests of loblolly pine throughout the southeastern United States. Silvae Genet. 57: 101-110.
26. Powers, H.R., Jr. 1980. Pathogenic variation among single-aeciospore isolates of Cronartium quercuum f. sp. fusiforme. For. Sci. 26: 280-282.
27. Powers, H.R., Jr., and Kraus, J.F. 1983. Developing fusiform rustresistant loblolly pine and slash pine. Plant Dis. 67: 187-189.
28. Powers, H.R., Jr., and Kraus, J.F. 1986. A comparison of fusiform rust-resistant loblolly pine seed sources. South. J. Appl. For. 10: 230-232.
29. Powers, H.R., Jr., and Kuhlman, E.G. 1987. Resistance of loblolly pine sources to fusiform rust in field progeny tests. USDA For. Serv. Southeast. For. Exper. Stn. Res. Pap. SE-268. Available from at http://www.srs.fs.usda.gov/ pubs/rp/rp_se268.pdf [accessed 8 September 2008].
30. Powers, H.R., Jr., Schmidt, R.A., and Snow, G.A. 1981. Current status and management of fusiform rust on southern pines. Annu. Rev. Phytopathol. 19: 353-371. doi:10.1146/annurev.py.19.090181.002033.
31. Powers, H.R., Jr., Matthews, F.R., and Dwinell, L.D. 1977. Evaluation of pathogenic variability of Cronartium fusiforme on loblolly pine in the southern USA. Phytopathology, 67: 1403-1407.
32. SAS Institute Inc. 1996. SAS/STAT software: changes and enhancements (through release 6.11). SAS Institute Inc., Cary, N.C.
33. Saxton, A. (Editor). 2004. Genetic analysis of complex traits using SAS. SAS Institute Inc., Cary, N.C.
34. Schall, R. 1991. Estimation in generalized linear models with random effects. Biometrika, 78: 719-727. doi:10.1093/biomet/78.4.719.
35. Schmidt, R.A., Powers, H.R., Jr., and Snow, G.A. 1981. Application of genetic disease resistance for the control of fusiform rust in intensively managed southern pine. Phytopathology, 31: 993-997.
36. Shukla, G.K. 1972. Some statistical aspects of partitioning genotype-environmental components of variability. Heredity, 29: 237-245. doi:10.1038/hdy.1972.87. PMID:4507945.
37. Snow, G.A., Dinus, R.A., and Kais, A.G. 1975. Variation in pathogenicity of diverse sources of Cronartium fusiforme on selected slash pine families. Phytopathology, 65: 170-175.
38. Tempelman, R.J. 1998. Generalized linear mixed models in dairy cattle breeding. J. Dairy Sci. 81: 1428-1444. PMID:9621247.
39. Walkinshaw, C.H., and Bey, C.F. 1981. Reaction of field-resistant slash pine to selected isolates of Cronartium quercuum f.sp. fusiforme. Phytopathology, 71: 1090-1092.
40. Wilcox, P.L., Amerson, H.V., Kuhlman, E.G., Liu, B.H., O'Malley, D.M., and Sederoff, R.R. 1996. Detection of a major gene for resistance to fusiform rust disease in loblolly pine by genomic mapping. Proc. Natl. Acad. Sci. U.S.A, 93: 3859-3864. doi:10.1073/pnas.93.9.3859. PMID:8632980.
41. Xiang, B., and Li, B. 2001. A new mixed analytical method for genetic analysis of diallel data. Can. J. For. Res. 31: 2252-2259. doi:10.1139/cjfr-31-12-2252.