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Volumn 72, Issue 5, 2008, Pages 341-349

RelACCS-FP: A structural minimalist approach to fingerprint design

Author keywords

Chemoinformatics; Compound class specific descriptors; Fingerprint design; Fragment frequency; Randomly generated fragments; Similarity coefficients; Similarity searching

Indexed keywords

BLOOD CLOTTING FACTOR 7A INHIBITOR; BRADYKININ ANTAGONIST; CALPASTATIN; CELL ADHESION MOLECULE; CYSTEINE PROTEINASE INHIBITOR; DOPAMINE 1 RECEPTOR STIMULATING AGENT; ENZYME INHIBITOR; FIBRINOGEN RECEPTOR ANTAGONIST; MELATONIN; PROTEIN INHIBITOR; SQUALENE MONOOXYGENASE; SQUALENE SYNTHASE INHIBITOR; XANTHINE OXIDASE INHIBITOR;

EID: 54249159585     PISSN: 17470277     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1747-0285.2008.00723.x     Document Type: Article
Times cited : (14)

References (17)
  • 1
    • 0036835460 scopus 로고    scopus 로고
    • Integration of virtual and high-throughput screening
    • Bajorath J. (2002) Integration of virtual and high-throughput screening. Nat Rev Drug Discov 1 : 882 894.
    • (2002) Nat Rev Drug Discov , vol.1 , pp. 882-894
    • Bajorath, J.1
  • 3
    • 0000131605 scopus 로고    scopus 로고
    • Chemical fragment generation and clustering software
    • Barnard J.M., Downs G.M. (1997) Chemical fragment generation and clustering software. J Chem Inf Comput Sci 37 : 141 142.
    • (1997) J Chem Inf Comput Sci , vol.37 , pp. 141-142
    • Barnard, J.M.1    Downs, G.M.2
  • 4
    • 0015655543 scopus 로고
    • Analysis of structural characteristics of chemical compounds in the common data base
    • Adamson G.W., Creasey S.E., Lynch M.F. (1973) Analysis of structural characteristics of chemical compounds in the common data base. J Chem Doc 13 : 158 162.
    • (1973) J Chem Doc , vol.13 , pp. 158-162
    • Adamson, G.W.1    Creasey, S.E.2    Lynch, M.F.3
  • 5
    • 0016536711 scopus 로고
    • An efficient design for chemical structure searching. I. the screens
    • Feldman A., Hodes L. (1975) An efficient design for chemical structure searching. I. The screens. J Chem Inf Comput Sci 15 : 147 152.
    • (1975) J Chem Inf Comput Sci , vol.15 , pp. 147-152
    • Feldman, A.1    Hodes, L.2
  • 6
    • 0029894013 scopus 로고    scopus 로고
    • The properties of known drugs. 1. Molecular frameworks
    • Bemis G.W., Murcko M.A. (1996) The properties of known drugs. 1. Molecular frameworks. J Med Chem 39 : 2887 2893.
    • (1996) J Med Chem , vol.39 , pp. 2887-2893
    • Bemis, G.W.1    Murcko, M.A.2
  • 7
    • 0032058905 scopus 로고    scopus 로고
    • RECAP - Retrosynthetic combinatorial analysis procedure: A powerful new technique for identifying privileged molecular fragments with useful applications in combinatorial chemistry
    • Lewell X.Q., Judd D.B., Watson S.P., Hann M.M. (1998) RECAP - retrosynthetic combinatorial analysis procedure: a powerful new technique for identifying privileged molecular fragments with useful applications in combinatorial chemistry. J Chem Inf Comput Sci 38 : 511 522.
    • (1998) J Chem Inf Comput Sci , vol.38 , pp. 511-522
    • Lewell, X.Q.1    Judd, D.B.2    Watson, S.P.3    Hann, M.M.4
  • 8
    • 33750381015 scopus 로고    scopus 로고
    • Assessment of molecular similarity from the analysis of randomly generated structural fragment populations
    • Batista J., Godden J.W., Bajorath J. (2006) Assessment of molecular similarity from the analysis of randomly generated structural fragment populations. J Chem Inf Comput Sci 46 : 1937 1944.
    • (2006) J Chem Inf Comput Sci , vol.46 , pp. 1937-1944
    • Batista, J.1    Godden, J.W.2    Bajorath, J.3
  • 9
    • 34547678010 scopus 로고    scopus 로고
    • Mining of randomly generated molecular fragment populations uncovers activity-specific fragment hierarchies
    • Batista J., Bajorath J. (2007) Mining of randomly generated molecular fragment populations uncovers activity-specific fragment hierarchies. J Chem Inf Model 47 : 1405 1413.
    • (2007) J Chem Inf Model , vol.47 , pp. 1405-1413
    • Batista, J.1    Bajorath, J.2
  • 10
    • 46049100613 scopus 로고    scopus 로고
    • Similarity searching using compound class-specific combinations of substructures found in randomly generated molecular fragment populations
    • Batista J., Bajorath J. (2008) Similarity searching using compound class-specific combinations of substructures found in randomly generated molecular fragment populations. ChemMedChem 3 : 67 73.
    • (2008) ChemMedChem , vol.3 , pp. 67-73
    • Batista, J.1    Bajorath, J.2
  • 11
    • 33845775349 scopus 로고    scopus 로고
    • Design and evaluation of a novel class-directed 2D fingerprint to search for structurally diverse active compounds
    • Eckert H., Bajorath J. (2006) Design and evaluation of a novel class-directed 2D fingerprint to search for structurally diverse active compounds. J Chem Inf Model 46 : 2515 2526.
    • (2006) J Chem Inf Model , vol.46 , pp. 2515-2526
    • Eckert, H.1    Bajorath, J.2
  • 12
    • 0037313495 scopus 로고    scopus 로고
    • Mini-fingerprints for virtual screening: Design principles and generation of novel prototypes based on information theory
    • Xue L., Godden J.W., Bajorath J. (2002) Mini-fingerprints for virtual screening: design principles and generation of novel prototypes based on information theory. SAR QSAR Env Res 14 : 27 40.
    • (2002) SAR QSAR Env Res , vol.14 , pp. 27-40
    • Xue, L.1    Godden, J.W.2    Bajorath, J.3
  • 14
    • 34548150135 scopus 로고    scopus 로고
    • Comparison of 2D fingerprint methods for multiple-template similarity searching on compound activity classes of increasing structural diversity
    • Tovar A., Eckert H., Bajorath J. (2007) Comparison of 2D fingerprint methods for multiple-template similarity searching on compound activity classes of increasing structural diversity. ChemMedChem 2 : 208 217.
    • (2007) ChemMedChem , vol.2 , pp. 208-217
    • Tovar, A.1    Eckert, H.2    Bajorath, J.3
  • 15
    • 13844312649 scopus 로고    scopus 로고
    • ZINC - A free database of commercially available compounds for virtual screening
    • Irwin J.J., Shoichet B.K. (2005) ZINC - a free database of commercially available compounds for virtual screening. J Chem Inf Model 45 : 177 182.
    • (2005) J Chem Inf Model , vol.45 , pp. 177-182
    • Irwin, J.J.1    Shoichet, B.K.2
  • 16
    • 0038170311 scopus 로고    scopus 로고
    • Similarity metrics for ligands reflecting the similarity of the target proteins
    • Schuffenhauer A., Floersheim P., Acklin P., Jacoby E. (2003) Similarity metrics for ligands reflecting the similarity of the target proteins. J Chem Inf Comput Sci 43 : 391 405.
    • (2003) J Chem Inf Comput Sci , vol.43 , pp. 391-405
    • Schuffenhauer, A.1    Floersheim, P.2    Acklin, P.3    Jacoby, E.4
  • 17
    • 46049086172 scopus 로고    scopus 로고
    • Distribution of randomly generated activity class characteristic substructures in diverse active and database compounds
    • Batista J., Bajorath J. (2008) Distribution of randomly generated activity class characteristic substructures in diverse active and database compounds. Mol Divers 12 : 77 83.
    • (2008) Mol Divers , vol.12 , pp. 77-83
    • Batista, J.1    Bajorath, J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.