Genetic analysis of the Salmonella transcription factor HilA

Canadian Journal of Microbiology

Volumn 54, Issue 10, 2008, Pages 854-860

  Daly, Rebecca A ^a   Lostroh, C Phoebe ^a  

^a University of Colorado College of Nursing   (United States)

Author keywords

HilA; Salmonella virulence gene regulation

Indexed keywords

AMINATION; AMINES; AMINO ACIDS; BINDING SITES; NUCLEIC ACIDS; ORGANIC ACIDS; PROTEINS; TRANSCRIPTION FACTORS;

ACTIVATION DOMAINS; ALANINE SUBSTITUTIONS; ALLELE ENCODING; DO-MAINS; GENETIC ANALYSES; HILA; POSITIONING; SALMONELLA VIRULENCE GENE REGULATION;

TRANSCRIPTION;

ALANINE; ARGININE; TRANSCRIPTION FACTOR HILA; UNCLASSIFIED DRUG; WINGED HELIX TRANSCRIPTION FACTOR;

AMINO ACID; BACTERIUM; DNA; GENE EXPRESSION; GENETIC ANALYSIS; PROTEIN;

ALLELE; AMINO ACID SUBSTITUTION; ARTICLE; CONTROLLED STUDY; GENE ACTIVATION; GENETIC ANALYSIS; MOLECULAR RECOGNITION; NONHUMAN; PHENOTYPE; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN DOMAIN; SALMONELLA;

BACTERIAL PROTEINS; BASE SEQUENCE; GENE EXPRESSION REGULATION, BACTERIAL; HELIX-TURN-HELIX MOTIFS; MOLECULAR SEQUENCE DATA; MUTATION; PROMOTER REGIONS, GENETIC; PROTEIN STRUCTURE, TERTIARY; SALMONELLA; TRANS-ACTIVATORS;

SALMONELLA;

EID: 54249094270     PISSN: 00084166     EISSN: None     Source Type: Journal    
DOI: 10.1139/W08-075     Document Type: Article

References (24)

1. Bajaj, V., Hwang, C., and Lee, C.A. 1995. hilA is a novel ompR/toxR family member that activates the expression of Salmonella typhimurium invasion genes. Mol. Microbiol. 18: 715-727. doi:10.1111/j.1365-2958.1995.mmi_18040715.x. PMID:8817493.
2. Blanco, A.G., Sola, M., Gomis-Ruth, F.X., and Coll, M. 2002. Tandem DNA recognition by PhoB, a two-component signal transduction transcriptional activator. Structure, 10: 701-713. doi:10.1016/S0969-2126(02)00761-X. PMID:12015152.
3. Buckler, D.R., Zhou, Y., and Stock, A.M. 2002. Evidence of intradomain and interdomain flexibility in an OmpR/PhoB homolog from thermotoga maritima. Structure, 10: 153-164. doi:10.1016/S0969-2126(01)00706-7. PMID:11839301.
4. Chen, Y., Abdel-Fattah, W.R., and Hulett, F.M. 2004. Residues required for Bacillus subtilis PhoPDNA binding or RNA polymerase interaction: alanine scanning of PhoP effector domain transactivation loop and alpha helix 3. J. Bacteriol. 186: 1493-1502. doi:10.1128/JB.186.5.1493-1502.2004. PMID:14973033.
5. Das, S., Chakrabortty, A., Banerjee, R., Roychoudhury, S., and Chaudhuri, K. 2000. Comparison of global transcription responses allows identification of Vibrio cholerae genes differentially expressed following infection. FEMS Microbiol. Lett. 190: 87-91. doi:10.1111/j.1574-6968.2000.tb09267.x. PMID:10981695.
6. Edqvist, P.J., Broms, J.E., Betts, H.J., Forsberg, A., Pallen, M.J., and Francis, M.S. 2006. Tetratricopeptide repeats in the type III secretion chaperone, LcrH: their role in substrate binding and secretion. Mol. Microbiol. 59: 31-44. doi:10.1111/j.1365-2958.2005.04923.x. PMID:16359316.
7. Ellermeier, J.R., and Slauch, J.M. 2007. Adaptation to the host environment: regulation of the SPI1 type III secretion system in Salmonella enterica serovar Typhimurium. Curr. Opin. Microbiol. 10: 24-29. doi:10.1016/j.mib.2006.12.002. PMID:17208038.
8. Haldimann, A., and Wanner, B.L. 2001. Conditional-replication, integration, excision, and retrieval plasmid-host systems for gene structure-function studies of bacteria. J. Bacteriol. 183: 6384-6393. doi:10.1128/JB.183.21.6384-6393.2001. PMID:11591683.
9. Haldimann, A., Daniels, L.L., and Wanner, B.L. 1998. Use of new methods for construction of tightly regulated arabinose and rhamnose promoter fusions in studies of the Escherichia coli phosphate regulon. J. Bacteriol. 180: 1277-1286. PMID:9495769.
10. Kachlany, S.C., Planet, P.J., Bhattacharjee, M.K., Kollia, E., De-Salle, R., Fine, D.H., et al. 2000. Nonspecific adherence by Actinobacillus actinomycetemcomitans requires genes widespread in bacteria and archaea. J. Bacteriol. 182: 6169-6176. doi:10. 1128/JB.182.21.6169-6176.2000. PMID:11029439.
11. Kenney, L.J. 2002. Structure/function relationships in OmpR and other winged-helix transcription factors. Curr. Opin. Microbiol. 5: 135-141. doi:10.1016/S1369-5274(02)00310-7. PMID:11934608.
12. Kondo, H., Nakagawa, A., Nishihira, J., Nishimura, Y., Mizuno, T., and Tanaka, I. 1997. Escherichia coli positive regulator OmpR has a large loop structure at the putative RNA polymerase interaction site. Nat. Struct. Biol. 4: 28-31. doi:10.1038/nsb0197-28. PMID:8989318.
13. Link, A.J., Phillips, D., and Church, G.M. 1997. Methods for generating precise deletions and insertions in the genome of wildtype Escherichia coli: application to open reading frame characterization. J. Bacteriol. 179: 6228-6237. PMID:9335267.
14. prgH from Salmonella pathogenicity island 1. J. Bacteriol. 183: 4876-4885. doi:10.1128/JB.183.16.4876-4885.2001. PMID:11466291.
15. Lostroh, C.P., Bajaj, V., and Lee, C.A. 2000. The cis requirements for transcriptional activation by HilA, a virulence determinant encoded on SPI-1. Mol. Microbiol. 37: 300-315. doi:10.1046/j.1365-2958.2000.01991.x. PMID:10931326.
16. Makino, K., Amemura, M., Kim, S.K., Nakata, A., and Shinagawa, H. 1993. Role of the sigma 70 subunit of RNA polymerase in transcriptional activation by activator protein PhoB in Escherichia coli. Genes Dev. 7: 149-160. doi:10.1101/gad.7.1.149. PMID:8422984.
17. Marchler-Bauer, A., Anderson, J.B., DeWeese-Scott, C., Fedorova, N.D., Geer, L.Y., He, S., et al. 2003. CDD: a curated entrez database of conserved domain alignments. Nucleic Acids Res. 31: 383-387. doi:10.1093/nar/ gkg087. PMID:12520028.
18. Martinez-Hackert, E., and Stock, A.M. 1997. Structural relationships in the OmpR family of winged-helix transcription factors. J. Mol. Biol. 269: 301-312. doi:10.1006/jmbi.1997.1065. PMID:9199401.
19. Miller, J.H. 1972. Experiments in molecular genetics. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
20. Ochman, H., and Groisman, E.A. 1996. Distribution of pathogenicity islands in Salmonella spp. Infect. Immun. 64: 5410-5412. PMID:8945597.
21. Pallen, M.J., Francis, M.S., and Futterer, K. 2003. Tetratricopeptidelike repeats in type-III-secretion chaperones and regulators. FEMS Microbiol. Lett. 223: 53-60. doi:10.1016/S0378-1097(03)00344-6. PMID:12799000.
22. Robinson, V.L., Wu, T., and Stock, A.M. 2003. Structural analysis of the domain interface in DrrB, a response regulator of the OmpR/PhoB subfamily. J. Bacteriol. 185: 4186-4194. doi:10.1128/JB.185.14.4186-4194.2003. PMID:12837793.
23. Rodriguez, C.R., Schechter, L.M., and Lee, C.A. 2002. Detection and characterization of the S. typhimurium HilA protein. BMC Microbiol. 2: 31. doi:10.1186/1471-2180-2-31. PMID:12396235.
24. Scheufler, C., Brinker, A., Bourenkov, G., Pegoraro, S., Moroder, L., Bartunik, H., et al. 2000. Structure of TPR domain - peptide complexes: critical elements in the assembly of the Hsp70-Hsp90 multichaperone machine. Cell, 101: 199-210. doi:10.1016/S0092-8674(00)80830-2. PMID:10786835.