A black-streaked dwarf disease on rice in China is caused by a novel fijivirus

Archives of Virology

Volumn 153, Issue 10, 2008, Pages 1893-1898

  Zhang, Heng Mu ^a   Yang, Jian ^a   Chen, Jian Ping ^a   Adams, M J ^b  

^a INSTITUTE OF PLANT PROTECTION AND MICROBIOLOGY   (China)

^b ROTHAMSTED RESEARCH   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS PROTEIN; VIRUS RNA;

AGAR GEL ELECTROPHORESIS; ARTICLE; CHINA; CLASSIFICATION; DNA SEQUENCE; GENETICS; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLANT DISEASE; POLYACRYLAMIDE GEL ELECTROPHORESIS; REOVIRUS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RICE; SEQUENCE HOMOLOGY; SEROTYPING; ULTRASTRUCTURE; VIROLOGY;

CHINA; ELECTROPHORESIS, AGAR GEL; ELECTROPHORESIS, POLYACRYLAMIDE GEL; MOLECULAR SEQUENCE DATA; ORYZA SATIVA; PHYLOGENY; PLANT DISEASES; REOVIRIDAE; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, VIRAL; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; SEROTYPING; VIRAL PROTEINS;

FIJIVIRUS; FIJIVIRUS GROUP 2; MAIZE ROUGH DWARF VIRUS; MAL DE RIO CUARTO VIRUS; ORTHOREOVIRUS; RICE BLACK STREAKED DWARF VIRUS; ZEA MAYS;

EID: 53849125401     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-008-0209-4     Document Type: Article

References (25)

1. SF Altschul TL Madden AA Schaffer J Zhang Z Zhang W Miller DJ Lipman 1997 Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res 25 3389 3402
2. JV Anzola Z Xu T Asamizu DL Nuss 1987 Segment-specific inverted repeats found adjacent to conserved terminal sequences in wound tumour virus genome and defective interfering RNAs Proc Natl Acad Sci USA 84 8301 8305
3. Boccardo G, Milne RG (1984) Plant reovirus group. CMI/AAB, Descriptions of Plant Viruses No. 294, Association of Applied Biologists, Wellesbourne, Warwick
4. F Corpet 1988 Multiple sequence alignment with hierarchical clustering Nucleic Acids Res 16 10881 10890
5. AJ Distéfano LR Conci MM Hidalgo FA Guzmán HE Hopp M del Vas 2002 Sequence analysis of genome segments S4 and S8 of Mal de Río Cuarto virus (MRCV): evidence that the virus should be a separate Fijivirus species Arch Virol 147 1699 1709
6. AJ Distéfano HE Hopp M Del Vas 2005 Sequence analysis of genome segments S5 and S10 of Mal de Rio Cuarto virus (Fijivirus, Reoviridae) Arch Virol 150 1241 1248
7. AJ Distéfano LR Conci M Munoz Hidalgo FA Guzman HE Hopp M del Vas 2003 Sequence and phylogenetic analysis of genome segments S1, S2, S3 and S6 of Mal de Rio Cuarto virus, a newly accepted Fijivirus species Virus Res 92 113 121
8. GK Dong EG Wang GL Luo LW Lin MP Guan ZD Zhang KS Chen 1999 Occurrence of rice black-streaked dwarf disease in late-season hybrid rice and its control strategy Acta Agric Zhejiang 11 364 367
9. FA Guzmán AJ Distéfano JD Arneodo HE Hopp SL Lenardon M del Vas LR Conci 2007 Sequencing of the bicistronic genome segments S7 and S9 of Mal de Río Cuarto virus (Fijivirus, Reoviridae) completes the genome of this virus Arch Virol 152 565 573
10. M Isogai F Azuhata I Uyeda E Shikata I Kimura 1995 Genomic relationships between rice black-streaked dwarf and maize rough dwarf Fijiviruses detected by nucleic acid hybridization Ann Phytopath Soc Japan 61 513 518
11. M Isogai I Uyeda B-C Lee 1998 Detection and assignment of proteins encoded by rice black streaked dwarf fijivirus S7, S8, S9, and S10 J Gen Virol 79 1487 1494
12. S Kumar K Tamura M Nei 2004 MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment Brief Bioinform 5 150 163
13. J Li G Li F Yuan 1999 Control of the maize rough dwarf virus disease Beijing Agric Sci 17 23 25
14. E Luisoni O Lovisolo Y Kitagawa E Shikata 1973 Serological relationship between maize rough dwarf virus and rice black streaked dwarf virus Virology 52 281 283
15. C Marzachi G Boccardo R Milne M Isogai I Uyeda 1995 Genome structure and variability of fijiviruses Sem Virol 6 103 108
16. JA McMahon JL Dale RM Harding 1999 Taxonomic implications for Fijiviruses based on the terminal sequences of Fiji disease fijivirus Arch Virol 144 2259 2263
17. RB McQualter P Burns GR Smith JL Dale RM Harding 2004 Molecular analysis of Fiji disease virus genome segments 5, 6, 8 and 10 Arch Virol 149 713 721
18. Milne RG, del Vas M, Harding RM, Marzachi R, Mertens PPC (2005) Genus Fijivirus. In: Fauquet CM, Mayo MA, Maniloff J, Desselberger U, Ball LA (eds) Virus taxonomy. Eighth report of the international committee on taxonomy of viruses. Elsevier Academic Press, San Diego, pp 534-542
19. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory Press, New York
20. JD Thompson DG Higgins TJ Gibson 1994 CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice Nucleic Acids Res 22 4673 4680
21. Uyeda I, Bong-Choon L, Ando Y (1998) Reovirus isolation and RNA extraction. In: Foster GD, Taylor SC (eds) Methods in molecular biology, vol 81. Plant virology protocols: from virus isolation to transgenic resistance. Humana Press, Totowa, pp 65-75
22. Van Regenmortel MHV, Fauquet CM, Bishop DHL, Carstens E, Estes MK, Lemon S, McGeoch D, Wickner RB, Mayo MA, Pringle CR, Maniloff J (eds) (2000) Virus taxonomy. Seventh report of the international committee on taxonomy of viruses. Academic Press, New York
23. HM Zhang JP Chen MJ Adams 2001 Molecular characterization of segments 1 to 6 of rice black-streaked dwarf virus from China provides the complete genome Arch Virol 146 2331 2339
24. HM Zhang JP Chen JL Lei MJ Adams 2001 Sequence analysis shows that a dwarfing disease on rice, maize and wheat in China is caused by Rice black-streaked dwarf virus (RBSDV) Eur J Plant Pathol 107 563 567
25. Zhou GH, Xu DL, Li HP (2004) Identification of rice black-streaked dwarf virus infecting rice in Guangdong. In: Peng YL (ed) Proceedings of the conference on Chinese plant pathology. China Agricultural Scientech Press, Beijing, pp 210-212