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Volumn 82, Issue 20, 2008, Pages 10118-10128

Identification of a conserved RNA replication element (cre) within the 3Dpol-coding sequence of hepatoviruses

Author keywords

[No Author keywords available]

Indexed keywords

CIS ACTING ELEMENT; GENOMIC RNA; NUCLEOTIDE; VIRUS RNA;

EID: 53749090392     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/JVI.00787-08     Document Type: Article
Times cited : (43)

References (33)
  • 1
    • 38849184624 scopus 로고    scopus 로고
    • The picornavirus avian encephalomyelitis virus possesses a hepatitis C virus-like internal ribosome entry site element
    • Bakhshesh, M., E. Groppelli, M. M. Willcocks, E. Royall, G. J. Belsham, and L. O. Roberts. 2008. The picornavirus avian encephalomyelitis virus possesses a hepatitis C virus-like internal ribosome entry site element. J. Virol. 82:1993-2003.
    • (2008) J. Virol , vol.82 , pp. 1993-2003
    • Bakhshesh, M.1    Groppelli, E.2    Willcocks, M.M.3    Royall, E.4    Belsham, G.J.5    Roberts, L.O.6
  • 2
    • 0025983563 scopus 로고
    • The 5′ nontranslated region of hepatitis A virus: Secondary structure and elements required for translation in vitro
    • Brown, E. A., S. P. Day, R. W. Jansen, and S. M. Lemon. 1991. The 5′ nontranslated region of hepatitis A virus: secondary structure and elements required for translation in vitro. J. Virol. 65:5828-5838.
    • (1991) J. Virol , vol.65 , pp. 5828-5838
    • Brown, E.A.1    Day, S.P.2    Jansen, R.W.3    Lemon, S.M.4
  • 3
    • 0036310386 scopus 로고    scopus 로고
    • Analysis of deletion mutants indicates that the 2A polypeptide of hepatitis A virus participates in virion morphogenesis
    • Cohen, L., D. Benichou, and A. Martin. 2002. Analysis of deletion mutants indicates that the 2A polypeptide of hepatitis A virus participates in virion morphogenesis. J. Virol. 76:7495-7505.
    • (2002) J. Virol , vol.76 , pp. 7495-7505
    • Cohen, L.1    Benichou, D.2    Martin, A.3
  • 6
    • 0030030793 scopus 로고    scopus 로고
    • RNA-protein interactions at the 3′ end of the hepatitis A virus RNA
    • Kusov, Y., M. Weitz, G. Dollenmeier, V. Gauss-Muller, and G. Siegl. 1996. RNA-protein interactions at the 3′ end of the hepatitis A virus RNA. J. Virol. 70:1890-1897.
    • (1996) J. Virol , vol.70 , pp. 1890-1897
    • Kusov, Y.1    Weitz, M.2    Dollenmeier, G.3    Gauss-Muller, V.4    Siegl, G.5
  • 7
    • 0026069630 scopus 로고
    • Antigenic and genetic variation in cytopathic hepatitis A virus variants arising during persistent infection: Evidence for genetic recombination
    • Lemon, S. M., P. C. Murphy, P. A. Shields, L.-H. Ping, S. M. Feinstone, T. Cromeans, and R. W. Jansen. 1991. Antigenic and genetic variation in cytopathic hepatitis A virus variants arising during persistent infection: evidence for genetic recombination. J. Virol. 65:2056-2065.
    • (1991) J. Virol , vol.65 , pp. 2056-2065
    • Lemon, S.M.1    Murphy, P.C.2    Shields, P.A.3    Ping, L.-H.4    Feinstone, S.M.5    Cromeans, T.6    Jansen, R.W.7
  • 8
    • 34249799046 scopus 로고    scopus 로고
    • Tyrosine 3 of poliovirus terminal peptide VPg(3B) has an essential function in RNA replication in the context of its precursor protein, 3AB
    • Liu, Y., D. Franco, A. V. Paul, and E. Wimmer. 2007. Tyrosine 3 of poliovirus terminal peptide VPg(3B) has an essential function in RNA replication in the context of its precursor protein, 3AB. J. Virol. 81:5669-5684.
    • (2007) J. Virol , vol.81 , pp. 5669-5684
    • Liu, Y.1    Franco, D.2    Paul, A.V.3    Wimmer, E.4
  • 9
    • 0033613152 scopus 로고    scopus 로고
    • A coding RNA sequence acts as a replication signal in cardioviruses
    • Lobert, P. E., N. Escriou, J. Ruelle, and T. Michiels. 1999. A coding RNA sequence acts as a replication signal in cardioviruses. Proc. Natl. Acad. Sci. USA 96:11560-11565.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 11560-11565
    • Lobert, P.E.1    Escriou, N.2    Ruelle, J.3    Michiels, T.4
  • 10
    • 4243362063 scopus 로고    scopus 로고
    • The molecular biology of hepatitis A virus
    • J.-H. Ou ed, Kluwer Academic Publishers, Norwell, MA
    • Martin, A., and S. M. Lemon. 2002. The molecular biology of hepatitis A virus, p. 23-50. In J.-H. Ou (ed.), Hepatitis viruses. Kluwer Academic Publishers, Norwell, MA.
    • (2002) Hepatitis viruses , pp. 23-50
    • Martin, A.1    Lemon, S.M.2
  • 11
    • 0036776467 scopus 로고    scopus 로고
    • Identification and characterization of a cis-acting replication element (cre) adjacent to the internal ribosome entry site of foot-and-mouth disease virus
    • Mason, P. W., S. V. Bezborodova, and T. M. Henry. 2002. Identification and characterization of a cis-acting replication element (cre) adjacent to the internal ribosome entry site of foot-and-mouth disease virus. J. Virol. 76:9686-9694.
    • (2002) J. Virol , vol.76 , pp. 9686-9694
    • Mason, P.W.1    Bezborodova, S.V.2    Henry, T.M.3
  • 12
    • 0031762554 scopus 로고    scopus 로고
    • The rhinovirus type 14 genome contains an internally located RNA structure that is required for viral replication
    • McKnight, K. L., and S. M. Lemon. 1998. The rhinovirus type 14 genome contains an internally located RNA structure that is required for viral replication. RNA. 4:1569-1584.
    • (1998) RNA , vol.4 , pp. 1569-1584
    • McKnight, K.L.1    Lemon, S.M.2
  • 14
    • 0033766003 scopus 로고    scopus 로고
    • Identification of an RNA hairpin in poliovirus RNA that serves as the primary template in the in vitro uridylylation of VPg
    • Paul, A. V., E. Rieder, D. W. Kim, J. H. Van Boom, and E. Wimmer. 2000. Identification of an RNA hairpin in poliovirus RNA that serves as the primary template in the in vitro uridylylation of VPg. J. Virol. 74:10359-10370.
    • (2000) J. Virol , vol.74 , pp. 10359-10370
    • Paul, A.V.1    Rieder, E.2    Kim, D.W.3    Van Boom, J.H.4    Wimmer, E.5
  • 15
    • 0032554886 scopus 로고    scopus 로고
    • Protein-primed RNA synthesis by purified poliovirus RNA polymerase
    • Paul, A. V., J. H. Van Boom, D. Filippov, and E. Wimmer. 1998. Protein-primed RNA synthesis by purified poliovirus RNA polymerase. Nature 393:280-284.
    • (1998) Nature , vol.393 , pp. 280-284
    • Paul, A.V.1    Van Boom, J.H.2    Filippov, D.3    Wimmer, E.4
  • 16
    • 0242415195 scopus 로고    scopus 로고
    • A "slide-back" mechanism for the initiation of protein-primed RNA synthesis by the RNA polymerase of poliovirus
    • Paul, A. V., J. Yin, J. Mugavero, E. Rieder, Y. Liu, and E. Wimmer. 2003. A "slide-back" mechanism for the initiation of protein-primed RNA synthesis by the RNA polymerase of poliovirus. J. Biol. Chem. 278:43951-43960.
    • (2003) J. Biol. Chem , vol.278 , pp. 43951-43960
    • Paul, A.V.1    Yin, J.2    Mugavero, J.3    Rieder, E.4    Liu, Y.5    Wimmer, E.6
  • 17
    • 0033755326 scopus 로고    scopus 로고
    • Genetic and biochemical studies of poliovirus cis-acting replication element cre in relation to VPg uridylylation
    • Rieder, E., A. V. Paul, D. W. Kim, J. H. van Boom, and E. Wimmer. 2000. Genetic and biochemical studies of poliovirus cis-acting replication element cre in relation to VPg uridylylation. J. Virol. 74:10371-10380.
    • (2000) J. Virol , vol.74 , pp. 10371-10380
    • Rieder, E.1    Paul, A.V.2    Kim, D.W.3    van Boom, J.H.4    Wimmer, E.5
  • 18
    • 0028364693 scopus 로고
    • Proteinase 3C of hepatitis A virus (HAV) cleaves the HAV polyprotein P2-P3 at all sites including VP1/2A and 2A/2B
    • Schultheiss, T., Y. Y. Kusov, and V. Gauss-Müller. 1994. Proteinase 3C of hepatitis A virus (HAV) cleaves the HAV polyprotein P2-P3 at all sites including VP1/2A and 2A/2B. Virology 198:275-281.
    • (1994) Virology , vol.198 , pp. 275-281
    • Schultheiss, T.1    Kusov, Y.Y.2    Gauss-Müller, V.3
  • 19
    • 36049045180 scopus 로고    scopus 로고
    • Human rhinovirus type 14 gain-of-function mutants for oriI utilization define residues of 3C(D) and 3Dpol that contribute to assembly and stability of the picornavirus VPg uridylylation complex
    • Shen, M., Q. Wang, Y. Yang, H. B. Pathak, J. J. Arnold, C. Castro, S. M. Lemon, and C. E. Cameron. 2007. Human rhinovirus type 14 gain-of-function mutants for oriI utilization define residues of 3C(D) and 3Dpol that contribute to assembly and stability of the picornavirus VPg uridylylation complex. J. Virol. 81:12485-12495.
    • (2007) J. Virol , vol.81 , pp. 12485-12495
    • Shen, M.1    Wang, Q.2    Yang, Y.3    Pathak, H.B.4    Arnold, J.J.5    Castro, C.6    Lemon, S.M.7    Cameron, C.E.8
  • 20
    • 0021751118 scopus 로고
    • Stability of hepatitis A virus
    • Siegl, G., M. Weitz, and G. Kronauer. 1984. Stability of hepatitis A virus. Intervirology 22:218-226.
    • (1984) Intervirology , vol.22 , pp. 218-226
    • Siegl, G.1    Weitz, M.2    Kronauer, G.3
  • 22
    • 4344619191 scopus 로고    scopus 로고
    • Detection of genome-scale ordered RNA structure (GORS) in genomes of positive-stranded RNA viruses: Implications for virus evolution and host persistence
    • Simmonds, P., A. Tuplin, and D. J. Evans. 2004. Detection of genome-scale ordered RNA structure (GORS) in genomes of positive-stranded RNA viruses: implications for virus evolution and host persistence. RNA 10:1337-1351.
    • (2004) RNA , vol.10 , pp. 1337-1351
    • Simmonds, P.1    Tuplin, A.2    Evans, D.J.3
  • 23
    • 33645992762 scopus 로고    scopus 로고
    • Frequency and dynamics of recombination within different species of human enteroviruses
    • Simmonds, P., and J. Welch. 2006. Frequency and dynamics of recombination within different species of human enteroviruses. J. Virol. 80:483-493.
    • (2006) J. Virol , vol.80 , pp. 483-493
    • Simmonds, P.1    Welch, J.2
  • 24
    • 0027164245 scopus 로고
    • Analysis of a potential myristoylation site in hepatitis A virus capsid protein VP4
    • Tesar, M., X.-Y. Jia, D. F. Summers, and E. Ehrenfeld. 1993. Analysis of a potential myristoylation site in hepatitis A virus capsid protein VP4. Virology 194:616-626.
    • (1993) Virology , vol.194 , pp. 616-626
    • Tesar, M.1    Jia, X.-Y.2    Summers, D.F.3    Ehrenfeld, E.4
  • 26
    • 5444272324 scopus 로고    scopus 로고
    • Detailed mapping of RNA secondary structures in core and NS5B-encoding region sequences of hepatitis C virus by RNase cleavage and novel bioinformatic prediction methods
    • Tuplin, A., D. J. Evans, and P. Simmonds. 2004. Detailed mapping of RNA secondary structures in core and NS5B-encoding region sequences of hepatitis C virus by RNase cleavage and novel bioinformatic prediction methods. J. Gen. Virol. 85:3037-3047.
    • (2004) J. Gen. Virol , vol.85 , pp. 3037-3047
    • Tuplin, A.1    Evans, D.J.2    Simmonds, P.3
  • 27
    • 0022478935 scopus 로고
    • Detection of a genome-linked protein (VPg) of hepatitis A virus and its comparison with other picornaviral VPgs
    • Weitz, M., B. M. Baroudy, W. L. Maloy, J. R. Ticehurst, and R. H. Purcell. 1986. Detection of a genome-linked protein (VPg) of hepatitis A virus and its comparison with other picornaviral VPgs. J. Virol. 60:124-130.
    • (1986) J. Virol , vol.60 , pp. 124-130
    • Weitz, M.1    Baroudy, B.M.2    Maloy, W.L.3    Ticehurst, J.R.4    Purcell, R.H.5
  • 28
    • 34249855382 scopus 로고    scopus 로고
    • Disruption of innate immunity due to mitochondrial targeting of a picornaviral protease precursor
    • Yang, Y., Y. Liang, L. Qu, Z. Chen, M. Yi, K. Li, and S. M. Lemon. 2007. Disruption of innate immunity due to mitochondrial targeting of a picornaviral protease precursor. Proc. Natl. Acad. Sci. USA 104:7253- 7258.
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 7253-7258
    • Yang, Y.1    Liang, Y.2    Qu, L.3    Chen, Z.4    Yi, M.5    Li, K.6    Lemon, S.M.7
  • 29
    • 0036314310 scopus 로고    scopus 로고
    • Sequence requirements for viral RNA replication and VPg uridylylation directed by the internal cis-acting replication element (cre) of human rhinovirus type 14
    • Yang, Y., R. Rijnbrand, K. L. McKnight, E. Wimmer, A. Paul, A. Martin, and S. M. Lemon. 2002. Sequence requirements for viral RNA replication and VPg uridylylation directed by the internal cis-acting replication element (cre) of human rhinovirus type 14. J. Virol. 76:7485-7494.
    • (2002) J. Virol , vol.76 , pp. 7485-7494
    • Yang, Y.1    Rijnbrand, R.2    McKnight, K.L.3    Wimmer, E.4    Paul, A.5    Martin, A.6    Lemon, S.M.7
  • 30
    • 0036145482 scopus 로고    scopus 로고
    • Replication of subgenomic hepatitis A virus RNAs expressing firefly luciferase is enhanced by mutations associated with adaptation of virus to growth in cultured cells
    • Yi, M., and S. M. Lemon. 2002. Replication of subgenomic hepatitis A virus RNAs expressing firefly luciferase is enhanced by mutations associated with adaptation of virus to growth in cultured cells. J. Virol. 76:1171-1180.
    • (2002) J. Virol , vol.76 , pp. 1171-1180
    • Yi, M.1    Lemon, S.M.2
  • 31
    • 0037405787 scopus 로고    scopus 로고
    • Functional dissection of a poliovirus cis-acting replication element [PV-cre(2C)]: Analysis of single- and dual-cre viral genomes and proteins that bind specifically to PV-cre RNA
    • Yin, J., A. V. Paul, E. Wimmer, and E. Rieder. 2003. Functional dissection of a poliovirus cis-acting replication element [PV-cre(2C)]: analysis of single- and dual-cre viral genomes and proteins that bind specifically to PV-cre RNA. J. Virol. 77:5152-5166.
    • (2003) J. Virol , vol.77 , pp. 5152-5166
    • Yin, J.1    Paul, A.V.2    Wimmer, E.3    Rieder, E.4
  • 32
    • 0347634413 scopus 로고    scopus 로고
    • A cis-acting replication element in the sequence encoding the NS5B RNA-dependent RNA polymerase is required for hepatitis C virus RNA replication
    • You, S., D. D. Stump, A. D. Branch, and C. M. Rice. 2004. A cis-acting replication element in the sequence encoding the NS5B RNA-dependent RNA polymerase is required for hepatitis C virus RNA replication. J. Virol. 78:1352-1366.
    • (2004) J. Virol , vol.78 , pp. 1352-1366
    • You, S.1    Stump, D.D.2    Branch, A.D.3    Rice, C.M.4
  • 33
    • 0028858326 scopus 로고
    • An infectious cDNA clone of a cytopathic hepatitis A virus: Genomic regions associated with rapid replication and cytopathic effect
    • Zhang, H. C., S. F. Chao, L. H. Ping, K. Grace, B. Clarke, and S. M. Lemon. 1995. An infectious cDNA clone of a cytopathic hepatitis A virus: genomic regions associated with rapid replication and cytopathic effect. Virology 212:686-697.
    • (1995) Virology , vol.212 , pp. 686-697
    • Zhang, H.C.1    Chao, S.F.2    Ping, L.H.3    Grace, K.4    Clarke, B.5    Lemon, S.M.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.