EPoS: A modular software framework for phylogenetic analysis

Bioinformatics

Volumn 24, Issue 20, 2008, Pages 2399-2400

  Griebel, Thasso ^a   Brinkmeyer, Malte ^a   Böcker, Sebastian ^a  

^a FRIEDRICH SCHILLER UNIVERSITY JENA   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; COMPUTER GRAPHICS; COMPUTER INTERFACE; COMPUTER PROGRAM; GENETIC ALGORITHM; INFORMATION PROCESSING; MOLECULAR PHYLOGENY; PHYLOGENETIC TREE; PHYLOGENETIC TREE CONSTRUCTION METHOD; PRIORITY JOURNAL;

ALGORITHMS; COMPUTATIONAL BIOLOGY; PHYLOGENY; SOFTWARE; USER-COMPUTER INTERFACE;

EID: 53749086324     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btn364     Document Type: Article

References (7)

1. Aho,A.V. et al. (1981) Inferring a tree from lowest common ancestors with an application to the optimization of relational expressions. SIAM J. Comput., 10, 405-421.
2. Berry,V. and Semple,C. (2006) Fast computation of supertrees for compatible phylogenies with nested taxa. Syst. Biol., 55, 270-288.
3. Bryant,D. et al. (2004) Supertree methods for ancestral divergence dates and other applications, Computational Biology Series, Kluwer, pp. 129-150.
4. Munzner,T. et al. (2003) Treejuxtaposer: Scalable tree comparison using focus+context with guaranteed visibility. ACM Trans. Graph., 22, 453-462.
5. Page,R.D.M. (2002) Modified mincut supertrees. In Proceedings of Workshop on Algorithms in Bioinformatics (WABI 2002), Vol. 2452 of LNCS. Springer, pp. 537-552.
6. Saitou,N. and Nei,M. (1987) The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol., 4, 406-425.
7. Semple,C. and Steel,M. (2000) A supertree method for rooted trees. Discrete Appl. Math., 105, 147-158.