Molecular characterization of equine rotavirus in Ireland

Journal of Clinical Microbiology

Volumn 46, Issue 10, 2008, Pages 3346-3354

  Collins, P J ^a   Cullinane, A ^b   Martella, V ^c   O'Shea, H ^a  

^a Munster Technological University   (Ireland)

^b IRISH EQUINE CENTRE   (Ireland)

^c UNIVERSITY OF BARI   (Italy)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN VP4; PROTEIN VP7; PROTEIN VP8; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ARTICLE; CONTROLLED STUDY; FECES ANALYSIS; GENOTYPE; IRELAND; MOLECULAR GENETICS; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; ROTAVIRUS; SEQUENCE ANALYSIS; UNINDEXED SEQUENCE; VIRUS STRAIN;

ANIMALS; ANTIGENS, VIRAL; CAPSID PROTEINS; FECES; HORSE DISEASES; HORSES; IRELAND; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, VIRAL; ROTAVIRUS; ROTAVIRUS INFECTIONS; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; SEROTYPING;

EQUIDAE; EQUINE ROTAVIRUS; ROTAVIRUS; ROTAVIRUS A;

EID: 53649110733     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.00995-08     Document Type: Article

References (56)

1. Arista, S., G. M. Giammanco, S. De Grazia, S. Ramirez, C. Lo Biundo, C. Colomba, A. Cascio, and V. Martella. 2006. Heterogeneity and temporal dynamics of evolution of G1 human rotaviruses in a settled population. J. Virol. 80:10724-10733.
2. Barrandeguy, M., V. Parreno, M. Lagos Marmol, F. Pont Lezica, C. Rivas, C. Valle, and F. Fernandez. 1998. Prevention of rotavirus diarrhoea in foals by parenteral vaccination of the mares: field trial. Dev. Biol. Stand. 92:253-257.
3. Browning, G. F., R. M. Chalmers, C. H. S. Sale, T. A. Fitzgerald, and D. R. Snodgrass. 1991. Homotypic and heterotypic serum and milk antibody to rotavirus in normal, infected and vaccinated horses. Vet. Microbiol. 27:231-244.
4. Browning, G. F., R. M. Chalmers, T. A. Fitzgerald, and D. R. Snodgrass. 1992. Evidence for two serotype G3 subtypes among equine rotaviruses. J. Clin. Microbiol. 30:485-491.
5. Browning, G. F., and A. P. Begg. 1996. Prevalence of G and P serotypes among equine rotaviruses in the faeces of diarrhoeic foals. Arch. Virol. 141:1077-1089.
6. Ciarlet, M., and M. K. Estes. 2002. Rotaviruses: basic biology, epidemiology and methodologies, p. 2753-2773. In G. Bitton (ed.), Encyclopedia of environmental microbiology. John Wiley and Sons, New York, NY.
7. Ciarlet, M., Y. Hoshino, and F. Liprandi. 1997. Single point mutations may affect the serotype reactivity of serotype G11 porcine rotavirus strains: a widening spectrum? J. Virol. 71:8213-8220.
8. Ciarlet, M., M. A. Gilger, C. Barone, M. McArthur, M. K. Estes, and M. E. Conner. 1998. Rotavirus disease, but not infection and development of intestinal histopathological lesions, is age restricted in rabbits. Virology 251:343-360.
9. Ciarlet, M., P. Isa, M. E. Conner, and F. Liprandi. 2001. Antigenic and molecular analyses reveal that the equine rotavirus strain H-1 is closely related to porcine, but not equine, rotaviruses: interspecies transmission from pigs to horses? Virus Genes 22:5-20.
10. Conner, M. E., and R. W. Darligton. 1980. Rotavirus infection of foals. Am. J. Vet. Res. 41:1699-1703.
11. Durham, P. J. K., B. J. U. Stevenson, and B. C. Farquharson. 1979. Rotavirus and coronavirus associated diarrhoea in domestic animals. N. Z. Vet. J. 27:30-32.
12. Dwyer, R. M., D. G. Powell, W. Roberts, M. Donahue, E. T. Lyons, M. Osborne, and G. Woode. 1990. A study of the etiology and control of infectious diarrhoea among foals in central Kentucky, p. 337-355. Proc. 36th Annu. Meet. Am. Assoc. Equine Pract. AAEP, Lexington, KY.
13. Dyall-Smith, M. L., I. Lazdins, G. W. Tregear, and I. H. Holmes. 1986. Location of the major antigenic sites involved in rotavirus serotype-specific neutralization. Proc. Natl. Acad. Sci. USA 83:3465-3468.
14. Eichorn, W., P. A. Bachamnn, H. Werhahn, and R. Jacobi. 1986. Occurrence and isolation in tissue culture of equine rotaviruses. J. Vet. Med. B 33:155-159.
15. Eichorn, W., and C. C. Huan. 1987. Serological investigations on the prevalence of rotavirus in horses. Tierarztl. Umsch. 42:22-23.
16. Elschner, M., C. Schrader, H. Hotzel, J. Prudlo, K. Sachse, W. Eichhorn, W. Herbst, and P. Otto. 2004. Isolation and molecular characterization of equine rotaviruses from Germany. Vet. Microbiol. 105:123-129.
17. Flewett, T. H., A. S. Bryden, and H. Davis. 1975. Virus diarrhoea in foals and other animals. Vet. Rec. 96:477.
18. Fukai, K., Y. Maeda, K. Fujimoto, T. Itou, and T. Sakai. 2002. Changes in the prevalence of rotavirus G and P types in diarrheic calves from the Kagoshima prefecture in Japan. Vet. Microbiol. 86:343-349.
19. Fukai, K., T. Saito, O. Fukuda, A. Hagiwara, K. Inoue, and M. Sato. 2006. Molecular characterisation of equine group A rotavirus, Nasuno, isolated in Tochigi Prefecture, Japan. Vet. J. 172:369-373.
20. Gentsch, J. R., R. I. Glass, P. Woods, V. Gouvea, M. Gorziglia, J. Flores, B. K. Das, and M. K. Bhan. 1992. Identification of group A rotavirus gene 4 types by polymerase chain reaction. J. Clin. Microbiol. 30:1365-1373.
21. Goto, H., H. Tsunemitsu, M. Horimoto, K. Shimizu, T. Urasawa, S. Urasawa, H. Ohishi, and Y. Ikemoto. 1981. A sero-epidemiological study on rotavirus infection in horses. Bull. Equine Res. Inst. 18:129-135.
22. Gouvea, V., R. I. Glass, P. Woods, K. Taniguchi, H. F. Clark, B. Forrester, and Z. Y. Fang. 1990. Polymerase chain reaction amplification and typing of rotavirus nucleic acid from stool specimens. J. Clin. Microbiol. 28:276-282.
23. Hall, T. A. 1999. BioEdit: a user friendly biological sequence alignment and analysis program for Windows 95/98/NT. Nucleic Acids Symp. 41:95-98.
24. Imagawa, H., Y. Ando, T. Sugiura, R. Wada, K. Hirasawa, and Y. Akiyama. 1981. Isolation of a foal rotavirus in MA-104 cells. Bull. Equine Res. Inst. 18:119-128.
25. Imagawa, H., R. Wada, M. Kamada, T. Kumanomido, Y. Fukunaga, and K. Hirasawa. 1984. Experimental infection of equine rotavirus in foals. Bull. Equine Res. Inst. 21:65-71.
26. Imagawa, H., K. Sekiguchi, T. Anzai, Y. Fukunaga, T. Kanemaru, H. Ohishi, T. Higuchi, and M. Kamada. 1991. Epidemiology of equine rotavirus infection among foals in the breeding region. J. Vet. Med. Sci. 53:1079-1080.
27. Imagawa, H., T. Tanaka, K. Sekiguchi, Y. Fukunaga, T. Anzai, N. Minamoto, and M. Kamada. 1993. Electropherotypes, serotypes and subgroups of equine rotaviruses isolated in Japan. Arch. Virol. 131:169-176.
28. Imagawa, H., S. Ishida, S. Uesugi, K. Masanobu, Y. Fukunaga, and O. Nakagomi. 1994. Genetic analysis of equine rotaviruses by RNA-RNA hybridisation. J. Clin. Microbiol. 32:2009-2012.
29. Imagawa, H., R. Wada, S. Sugita, and Y. Fukunaga. 1998. Passive immunity in foals of mares immunized with inactivated equine rotavirus vaccine, p. 201-205. In U. Wernery, J. A. Mumfold, and O. R. Kaaden (ed.), Equine infectious disease, vol. VIII. Publications Ltd., Newmarket, United Kingdom.
30. Imagawa, H., T. Kato, H. Tsunemitsu, H. Tanaka, S. Sato, and T. Higuchi. 2005. Field study of inactivated equine rotavirus vaccine. J. Equine Sci. 16:35-44.
31. Indecon International. 2004. An assessment of the economic contribution of the thoroughbred breeding and horse racing industry in Ireland. A final report for the Irish Thoroughred Breeders' Association, European Breeders' Fund and Horse Racing Ireland. Indecon, Dublin, Ireland. www.goracing.ie/AssetLibrary/Files/HRI/Info/indeconReportJULY2004.pdf.
32. Isa, P., and D. R. Snodgrass. 1994. Serologic and genomic characterization of equine rotavirus VP4 proteins identifies three different P serotypes. Virology 201:364-372.
33. Isa, P., A. R. Wood, T. Netherwood, M. Ciarlet, H. Imagawa, and D. R. Snodgrass. 1996. Survey of equine rotaviruses shows conservation of one P genotype in background of two G genotypes. Arch. Virol. 141:1601-1612.
34. Kanitz, C. L. 1976. Identification of an equine rotavirus as a cause of neonatal foal diarrhoea, p. 155-165. Proc. 22nd Annu. Meet. Am. Assoc. Equine Pract. AAEP, Lexington, KY.
35. Kapikian, A. Z., Y. Hoshino, and R. M. Chanock. 2001. Rotaviruses, p. 1787-1883. In D. M. Knipe and P. M. Howley (ed.), Fields virology, 4th ed. Lippincott Williams & Wilkins, Philadelphia, PA.
36. Khamrin, P., N. Maneekarn, S. Peerakome, W. Chan-it, F. Yagyu, S. Okitsu, and H. Ushijima. 2007. Novel porcine rotavirus of genotype P[27] shares new phylogenetic lineage with G2 porcine rotavirus strain. Virology 361:243-252.
37. Kobayashi, N., K. Taniguchi, and S. Urasawa. 1991. Analysis of the newly identified neutralization epitopes on VP7 of human rotavirus serotype 1. J. Gen. Virol. 72:117-124.
38. Kumar, S., K. Tamura, I. B. Jakobsen, and M. Nei. 2001. MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17:1244-1245.
39. Lecce, J. G., and M. W. King. 1978. Role of rotavirus (reo-like) in weanling diarrhoea of pigs. J. Clin. Microbiol. 8:454-458.
40. Martella, V., M. Ciarlet, K. Banyai, E. Lorusso, S. Arista, A. Lavazza, G. Pezzotti, N. Decaro, A. Cavalli, M. S. Lucente, M. Corrente, G. Elia, M. Camero, M. Tempesta, and C. Buonavoglia. 2007. Identification of group A porcine rotavirus strains bearing a novel VP4 (P) genotype in Italian swine herds. J. Clin. Microbiol. 45:577-580.
41. Matthijnssens, J., M. Ciarlet, E. Heiman, I. Arijs, T. Delbeke, S. McDonald, E. Palombo, M. Iturriza-Gomara, P. Maes, J. T. Patton, M. Rahman, and M. Van Ranst. 2008. Full genome-based classification of rotaviruses reveals common origin between human Wa-like and porcine rotavirus strains and human DS-1-like and bovine rotavirus strains. J. Virol. 82:3204-3219.
42. Nguyen, T. A., P. Khamrin, Q. D. Trinh, T. G. Phan, D. le Pham, P. le Hoang, K. T. Hoang, F. Yagyu, S. Okitsu, and H. Ushijima. 2007. Sequence analysis of Vietnamese P[6] rotavirus strains suggests evidence of interspecies transmission. J. Med. Virol. 79:1959-1965.
43. Nishikawa, K., Y. Hoshino, K. Taniguchi, K. Y. Green, H. B. Greenberg, A. Z. Kapikian, R. M. Chanock, and M. Gorziglia. 1989. Rotavirus VP7 neutralization epitopes of serotype 3 strains. Virology 171:503-515.
44. Parashar, U. D., E. G. Hummelman, J. S. Bresee, M. A. Miller, and R. I. Glass. 2003. Global illness and deaths caused by rotavirus disease in children. Emerg. Infect. Dis. 9:565-572.
45. Parra, G. I., G. Vidales, J. A. Gomez, F. M. Fernandez, V. Parreño, and K. Bok. 2008. Phylogenetic analysis of porcine rotavirus in Argentina: increasing diversity of G4 strains and evidence of interspecies transmission. Vet. Microbiol. 126:243-250.
46. Pearson, N. J., R. W. Fulton, C. J. Issel, and W. T. Springer. 1982. Prevalence of rotavirus antibody in chickens and horses in Louisiana, USA. Vet. Rec. 110:58-59.
47. Powell, D. J., R. M. Dwyer, J. L. Traub-Dargatz, R. H. Fulker, J. W. Whalen, Jr., J. Srinivasppa, W. M. Acree, and H. J. Chu. 1997. Field study of the safety, immunogenicity, and efficacy of an inactivated equine rotavirus vaccine. J. Am. Vet. Med. Assoc. 211:193-198.
48. Ramos, A. P., C. C. Stefanelli, R. E. Linhares, B. G. de Brito, N. Santos, V. Gouvea, R. de Cassia Lima, and C. Nozawa. 2000. The stability of porcine rotavirus in faeces. Vet. Microbiol. 71:1-8.
49. Scrutchfield, W. L., A. K. Eugster, H. Abel, Jr., and J. E. Ward, Jr. 1979. Rotavirus infections in foals, p.217-233. Proc. 25th Annu. Meet. Am. Assoc. Equine Pract. AAEP, Lexington, KY.
50. Steyer, A., M. Poljsak-Prijatelj, D. Barlic-Maganja, U. Jamnikar, J. Z. Mijovski, and J. Marin. 2007. Molecular characterization of a new porcine rotavirus P genotype found in an asymptomatic pig in Slovenia. Virology 359:275-282.
51. Strickland, K. L., P. Lenihan, M. G. O'Connor, and J. C. Condon. 1982. Diarrhoea in foals associated with rotavirus. Vet. Rec. 111:421.
52. Studdert, M. J., R. W. Mason, and B. E. Patten. 1978. Rotavirus diarrhoea of foals. Aust. Vet. J. 54:363-364.
53. To, T. L., L. A. Ward, L. Yuan, and L. J. Saif. 1998. Serum and intestinal isotype antibody responses and correlates of protective immunity to human rotavirus in a gnotobiotic pig model of disease. J. Gen. Virol. 79:2661-2672.
54. Tsunemitsu, H., H. Imagawa, M. Togo, T. Shouji, K. Kawashima, R. Horino, K. Imai, T. Nishimori, M. Tagaki, and T. Higuchi. 2001. Predominance of G3B and G14 equine group A rotavirus of a single VP4 serotype in Japan. Arch. Virol. 146:1949-1962.
55. Tzipori, S., and M. Walker. 1978. Isolation of rotavirus from foals with diarrhoea. Aust. J. Exp. Biol. Med. Sci. 56:453-457.
56. Widdowson, M. A., G. J. van Doornum, W. H. van der Poel, A. S. de Boer, R. van de Heide, U. Mahdi, P. Haanen, J. L. Kool, and M. Koopmans. 2002. An outbreak of diarrhea in a neonatal medium care unit caused by a novel strain of rotavirus: investigation using both epidemiologic and microbiological methods. Infect. Control Hosp. Epidemiol. 23:665-670.