Bacterial partitioning proteins affect the subcellular location of broad-host-range plasmid RK2

Microbiology

Volumn 154, Issue 9, 2008, Pages 2847-2856

  Kolatka, Katarzyna ^a   Witosinska, Monika ^a   Pierechod, Marcin ^a   Konieczny, Igor ^a  

^a UNIVERSITY OF GDA SK   (Poland)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; CELL PROTEIN; PROTEIN PARB; UNCLASSIFIED DRUG; BACTERIAL DNA; CHROMOSOME PARTITION PROTEINS, BACTERIAL;

ARTICLE; BACTERIAL CELL; BACTERIAL CHROMOSOME; CELL POLARITY; CELLULAR DISTRIBUTION; CENTROMERE; CONTROLLED STUDY; ESCHERICHIA COLI; GENE SEQUENCE; MUTANT; NONHUMAN; PLASMID; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN INTERACTION; PROTEIN LOCALIZATION; PSEUDOMONAS PUTIDA; REPLICON; BACTERIAL GENE; FLUORESCENCE IN SITU HYBRIDIZATION; GENETICS; ISOLATION AND PURIFICATION;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; PSEUDOMONAS; PSEUDOMONAS PUTIDA;

BACTERIAL PROTEINS; CHROMOSOMES, BACTERIAL; DNA, BACTERIAL; ESCHERICHIA COLI; GENES, BACTERIAL; IN SITU HYBRIDIZATION, FLUORESCENCE; PLASMIDS; PSEUDOMONAS PUTIDA; REPLICON;

EID: 53449099613     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/mic.0.2008/018762-0     Document Type: Article

References (38)

1. Chiu, C. M. & Thomas, C. M. (2004). Evidence for past integration of IncP-1 plasmids into bacterial chromosomes. FEMS Microbiol Lett 241, 163-169.
2. Davis, M. A. & Austin, S. J. (1988). Recognition of the P1 plasmid centromere analog involves binding of the ParB protein and is modified by a specific host factor. EMBO J 7, 1881-1888.
3. Ebersbach, G. & Gerdes, K. (2004). Bacterial mitosis: partitioning protein ParA oscillates in spiral-shaped structures and positions plasmids at mid-cell. Mol Microbiol 52, 385-398.
4. Ebersbach, G. & Gerdes, K. (2005). Plasmid segregation mechanisms. Annu Rev Genet 39, 453-479.
5. Ebersbach, G., Ringgaard, S., Moller-Jensen, J., Wang, Q., Sherratt, D. J. & Gerdes, K. (2006). Regular cellular distribution of plasmids by oscillating and filament-forming ParA ATPase of plasmid pB171. Mol Microbiol 61, 1428-1442.
6. Franklin, F. C., Bagdasarian, M., Bagdasarian, M. M. & Timmis, K. N. (1981). Molecular and functional analysis of the TOL plasmid pWWO from Pseudomonas putida and cloning of genes for the entire regulated aromatic ring meta cleavage pathway. Proc Natl Acad Sci U S A 78, 7458-7462.
7. Funnell, B. E. (2005). Partition-mediated plasmid pairing. Plasmid 53, 119-125.
8. Godfrin-Estevenon, A. M., Pasta, F. & Lane, D. (2002). The parAB gene products of Pseudomonas putida exhibit partition activity in both P. putida and Escherichia coli. Mol Microbiol 43, 39-49.
9. Gordon, G. S., Sitnikov, D., Webb, C. D., Teleman, A., Straight, A., Losick, R., Murray, A. W. & Wright, A. (1997). Chromosome and low copy plasmid segregation in E. coli: Visual evidence for distinct mechanisms. Cell 90, 1113-1121.
10. Gordon, S., Rech, J., Lane, D. & Wright, A. (2004). Kinetics of plasmid segregation in Escherichia coli. Mol Microbiol 51, 461-469.
11. Hayes, F. (2000). The partition system of multidrug resistance plasmid TP228 includes a novel protein that epitomizes an evolutionarily distinct subgroup of the ParA superfamily. Mol Microbiol 37, 528-541.
12. Ho, T. Q., Zhong, Z., Aung, S. & Pogliano, J. (2002). Compatible bacterial plasmids are targeted to independent cellular locations in Escherichia coli. EMBO J 21, 1864-1872.
13. Isaac, J. H. & Holloway, B. W. (1968). Control of pyrimidine biosynthesis in Pseudomonas aeruginosa. J Bacteriol 96, 1732-1741.
14. Jensen, R. B. & Gerdes, K. (1999). Mechanism of DNA segregation in prokaryotes: ParM partitioning protein of plasmid R1 co-localizes with its replicon during the cell cycle. EMBO J 18, 4076-4084.
15. Jensen, R. B. & Shapiro, L. (1999). Chromosome segregation during the prokaryotic cell division cycle. Curr Opin Cell Biol 11, 726-731.
16. Konieczny, I. & Helinski, D. R. (1997). Helicase delivery and activation by DnaA and TrfA proteins during the initiation of replication of the broad host range plasmid RK2. J Biol Chem 272, 33312-33318.
17. Kostelidou, K. & Thomas, C. M. (2000). The hierarchy of KorB binding at its 12 binding sites on the broad-host-range plasmid RK2 and modulation of this binding by IncC1 protein. J Mol Biol 295, 411-422.
18. Kovach, M. E., Elzer, P. H., Hill, D. S., Robertson, G. T., Farris, M. A., Roop, R. M. & Peterson, K. M. (1995). Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes. Gene 166, 175-176.
19. Lau, I. F., Filipe, S. R., Soballe, B., Okstad, O. A., Barre, F. X. & Sherratt, D. J. (2003). Spatial and temporal organization of replicating Escherichia coli chromosomes. Mol Microbiol 49, 731-743.
20. Lawley, T. D. & Taylor, D. E. (2003). Characterization of the double-partitioning modules of R27: Correlating plasmid stability with plasmid localization. J Bacteriol 185, 3060-3067.
21. Lewis, R. A., Bignell, C. R., Zeng, W., Jones, A. C. & Thomas, C. M. (2002). Chromosome loss from par mutants of Pseudomonas putida depends on growth medium and phase of growth. Microbiology 148, 537-548.
22. Li, Y. & Austin, S. (2002). The P1 plasmid in action: time-lapse photomicroscopy reveals some unexpected aspects of plasmid partition. Plasmid 48, 174-178.
23. Lin, D. C. & Grossman, A. D. (1998). Identification and characterization of a bacterial chromosome partitioning site. Cell 92, 675-685.
24. MacKenzie, C., Chidambaram, M., Sodergren, E. J., Kaplan, S. & Weinstock, G. M. (1995). DNA repair mutants of Rhodobacter sphaeroides. J Bacteriol 177, 3027-3035.
25. Meyer, R., Figurski, D. & Helinski, D. R. (1975). Molecular vehicle properties of the broad host range plasmid RK2. Science 190, 1226-1228.
26. Mohl, D. A. & Gober, J. W. (1997). Cell cycle-dependent polar localization of chromosome partitioning proteins in Caulobacter crescentus. Cell 88, 675-684.
27. Niki, H. & Hiraga, S. (1997). Subcellular distribution of actively partitioning F plasmid during the cell division cycle in E. coli. Cell 90, 951-957.
28. Ogasawara, N. & Yoshikawa, H. (1992). Genes and their organization in the replication origin region of the bacterial chromosome. Mol Microbiol 6, 629-634.
29. Pogliano, J., Ho, T. Q., Zhong, Z. & Helinski, D. R. (2001). Multicopy plasmids are clustered and localized in Escherichia coli. Proc Natl Acad Sci U S A 98, 4486-4491.
30. Rosche, T. M., Siddique, A., Larsen, M. H. & Figurski, D. H. (2000). Incompatibility protein IncC and global regulator KorB interact in active partition of promiscuous plasmid RK2. J Bacteriol 182, 6014-6026.
31. Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning: A Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
32. Schumacher, M. A. & Funnell, B. E. (2005). Structures of ParB bound to DNA reveal mechanism of partition complex formation. Nature 438, 516-519.
33. Thomas, C. M., Meyer, R. & Helinski, D. R. (1980). Regions of broad-host-range plasmid RK2 which are essential for replication and maintenance. J Bacteriol 141, 213-222.
34. Thomas, C. M., Cross, M. A., Hussain, A. A. & Smith, C. A. (1984). Analysis of copy number control elements in the region of the vegetative replication origin of the broad host range plasmid RK2. EMBO J 3, 57-63.
35. Verheust, C. & Helinski, D. R. (2007). The incC korB region of RK2 repositions a mini-RK2 replicon in Escherichia coli. Plasmid 58, 195-204.
36. Weitao, T., Dasgupta, S. & Nordstrom, K. (2000). Plasmid R1 is present as clusters in the cells of Escherichia coli. Plasmid 43, 200-204.
37. B3. Microbiology 144, 3369-3378.
38. Wilson, J. W., Sia, E. A. & Figurski, D. H. (1997). The kilE locus of promiscuous IncPα plasmid RK2 is required for stable maintenance in Pseudomonas aeruginosa. J Bacteriol 179, 2339-2347.