메뉴 건너뛰기




Volumn 9, Issue , 2008, Pages

A novel reverse transduction adenoviral array for the functional analysis of shRNA libraries

Author keywords

[No Author keywords available]

Indexed keywords

CASPASE 3; PROTEIN KINASE; SHORT HAIRPIN RNA; UNTRANSLATED RNA;

EID: 53349143085     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-9-441     Document Type: Article
Times cited : (9)

References (38)
  • 1
    • 0035799654 scopus 로고    scopus 로고
    • Microarrays of cells expressing defined cDNAs
    • 10.1038/35075114 11333987
    • Ziauddin J Sabatini DM Microarrays of cells expressing defined cDNAs Nature 2001, 411(6833):107-110. 10.1038/35075114 11333987
    • (2001) Nature , vol.411 , Issue.6833 , pp. 107-110
    • Ziauddin, J.1    Sabatini, D.M.2
  • 2
    • 31744445957 scopus 로고    scopus 로고
    • Microarrays of lentiviruses for gene function screens in immortalized and primary cells
    • 10.1038/nmeth848 16432521
    • Bailey SN Ali SM Carpenter AE Higgins CO Sabatini DM Microarrays of lentiviruses for gene function screens in immortalized and primary cells Nat Methods 2006, 3(2):117-122. 10.1038/nmeth848 16432521
    • (2006) Nat Methods , vol.3 , Issue.2 , pp. 117-122
    • Bailey, S.N.1    Ali, S.M.2    Carpenter, A.E.3    Higgins, C.O.4    Sabatini, D.M.5
  • 5
    • 24344500241 scopus 로고    scopus 로고
    • Sequence, chemical, and structural variation of small interfering RNAs and short hairpin RNAs and the effect on mammalian gene silencing
    • 10.1089/108729003321629638 12804036
    • Harborth J Elbashir SM Vandenburgh K Manninga H Scaringe SA Weber K Tuschl T Sequence, chemical, and structural variation of small interfering RNAs and short hairpin RNAs and the effect on mammalian gene silencing Antisense Nucleic Acid Drug Dev 2003, 13(2):83-105. 10.1089/ 108729003321629638 12804036
    • (2003) Antisense Nucleic Acid Drug Dev , vol.13 , Issue.2 , pp. 83-105
    • Harborth, J.1    Elbashir, S.M.2    Vandenburgh, K.3    Manninga, H.4    Scaringe, S.A.5    Weber, K.6    Tuschl, T.7
  • 6
    • 0034185302 scopus 로고    scopus 로고
    • BTK mediated apoptosis, a possible mechanism for failure to generate high titer retroviral producer clones
    • 10.1002/(SICI)1521-2254(200005/06)2:3<204::AID-JGM104>3.0.CO;2-5 10894266
    • Islam TC Branden LJ Kohn DB Islam KB Smith CI BTK mediated apoptosis, a possible mechanism for failure to generate high titer retroviral producer clones J Gene Med 2000, 2(3):204-209. 10.1002/ (SICI)1521-2254(200005/06)2:3<204::AID-JGM104>3.0.CO;2-5 10894266
    • (2000) J Gene Med , vol.2 , Issue.3 , pp. 204-209
    • Islam, T.C.1    Branden, L.J.2    Kohn, D.B.3    Islam, K.B.4    Smith, C.I.5
  • 7
    • 0034508241 scopus 로고    scopus 로고
    • The cellular phenotype conditions Btk for cell survival or apoptosis signaling
    • 10.1034/j.1600-065X.2000.17811.x 11213806
    • Islam TC Smith CI The cellular phenotype conditions Btk for cell survival or apoptosis signaling Immunol Rev 2000, 178:49-63. 10.1034/ j.1600-065X.2000.17811.x 11213806
    • (2000) Immunol Rev , vol.178 , pp. 49-63
    • Islam, T.C.1    Smith, C.I.2
  • 8
    • 0031708849 scopus 로고    scopus 로고
    • Bruton's tyrosine kinase (BTK) as a dual-function regulator of apoptosis
    • 10.1016/S0006-2952(98)00122-1 9751072
    • Uckun FM Bruton's tyrosine kinase (BTK) as a dual-function regulator of apoptosis Biochem Pharmacol 1998, 56(6):683-691. 10.1016/ S0006-2952(98)00122-1 9751072
    • (1998) Biochem Pharmacol , vol.56 , Issue.6 , pp. 683-691
    • Uckun, F.M.1
  • 9
    • 24644467226 scopus 로고    scopus 로고
    • p38 MAP kinase plays a role in G2 checkpoint activation and inhibits apoptosis of human B cell lymphoma cells treated with etoposide
    • 10.1007/s10495-005-3372-z 16151644
    • Kurosu T Takahashi Y Fukuda T Koyama T Miki T Miura O p38 MAP kinase plays a role in G2 checkpoint activation and inhibits apoptosis of human B cell lymphoma cells treated with etoposide Apoptosis 2005, 10(5):1111-1120. 10.1007/s10495-005-3372-z 16151644
    • (2005) Apoptosis , vol.10 , Issue.5 , pp. 1111-1120
    • Kurosu, T.1    Takahashi, Y.2    Fukuda, T.3    Koyama, T.4    Miki, T.5    Miura, O.6
  • 10
    • 33744494283 scopus 로고    scopus 로고
    • Inhibition of p38alpha MAPK enhances proteasome inhibitor-induced apoptosis of myeloma cells by modulating Hsp27, Bcl-X(L), Mcl-1 and p53 levels in vitro and inhibits tumor growth in vivo
    • 10.1038/sj.leu.2404200 16617327
    • Navas TA Nguyen AN Hideshima T Reddy M Ma JY Haghnazari E Henson M Stebbins EG Kerr I O'Young G et al.: Inhibition of p38alpha MAPK enhances proteasome inhibitor-induced apoptosis of myeloma cells by modulating Hsp27, Bcl-X(L), Mcl-1 and p53 levels in vitro and inhibits tumor growth in vivo Leukemia 2006, 20(6):1017-1027. 10.1038/ sj.leu.2404200 16617327
    • (2006) Leukemia , vol.20 , Issue.6 , pp. 1017-1027
    • Navas, T.A.1    Nguyen, A.N.2    Hideshima, T.3    Reddy, M.4    Ma, J.Y.5    Haghnazari, E.6    Henson, M.7    Stebbins, E.G.8    Kerr, I.9    O'Young, G.10
  • 11
    • 34548724059 scopus 로고    scopus 로고
    • Epidermal growth factor receptor signaling modulates apoptosis via p38alpha MAPK-dependent activation of Bax in intestinal epithelial cells
    • 10.1152/ajpgi.00182.2007 17615176
    • Sheng G Guo J Warner BW Epidermal growth factor receptor signaling modulates apoptosis via p38alpha MAPK-dependent activation of Bax in intestinal epithelial cells Am J Physiol Gastrointest Liver Physiol 2007, 293(3):G599-606. 10.1152/ajpgi.00182.2007 17615176
    • (2007) Am J Physiol Gastrointest Liver Physiol , vol.293 , Issue.3
    • Sheng, G.1    Guo, J.2    Warner, B.W.3
  • 12
    • 33749503799 scopus 로고    scopus 로고
    • Combined depletion of cell cycle and transcriptional cyclin-dependent kinase activities induces apoptosis in cancer cells
    • 10.1158/0008-5472.CAN-06-1758 16982772
    • Cai D Latham VM Jr Zhang X Shapiro GI Combined depletion of cell cycle and transcriptional cyclin-dependent kinase activities induces apoptosis in cancer cells Cancer Res 2006, 66(18):9270-9280. 10.1158/ 0008-5472.CAN-06-1758 16982772
    • (2006) Cancer Res , vol.66 , Issue.18 , pp. 9270-9280
    • Cai, D.1    Latham Jr., V.M.2    Zhang, X.3    Shapiro, G.I.4
  • 13
    • 4544233360 scopus 로고    scopus 로고
    • Measurement of changes in apoptosis and cell cycle regulatory kinase Cdk2
    • 15105561
    • Gil-Gomez G Measurement of changes in apoptosis and cell cycle regulatory kinase Cdk2 Methods Mol Biol 2004, 282:131-144. 15105561
    • (2004) Methods Mol Biol , vol.282 , pp. 131-144
    • Gil-Gomez, G.1
  • 16
    • 33646573938 scopus 로고    scopus 로고
    • Protein kinases controlling the onset of mitosis
    • 10.1007/s00018-005-5515-3 16465440
    • Ferrari S Protein kinases controlling the onset of mitosis Cell Mol Life Sci 2006, 63(7-8):781-795. 10.1007/s00018-005-5515-3 16465440
    • (2006) Cell Mol Life Sci , vol.63 , Issue.7-8 , pp. 781-795
    • Ferrari, S.1
  • 17
    • 33646839443 scopus 로고    scopus 로고
    • Nek2 kinase in chromosome instability and cancer
    • 10.1016/j.canlet.2005.06.017 16084011
    • Hayward DG Fry AM Nek2 kinase in chromosome instability and cancer Cancer Lett 2006, 237(2):155-166. 10.1016/j.canlet.2005.06.017 16084011
    • (2006) Cancer Lett , vol.237 , Issue.2 , pp. 155-166
    • Hayward, D.G.1    Fry, A.M.2
  • 18
    • 40549126830 scopus 로고    scopus 로고
    • Mitotic regulation by NIMA-related kinases
    • 2018689 17727698 10.1186/1747-1028-2-25
    • O'Regan L Blot J Fry AM Mitotic regulation by NIMA-related kinases Cell Div 2007, 2:25. 2018689 17727698 10.1186/1747-1028-2-25
    • (2007) Cell Div , vol.2 , pp. 25
    • O'Regan, L.1    Blot, J.2    Fry, A.M.3
  • 19
    • 34249308194 scopus 로고    scopus 로고
    • PBK/TOPK promotes tumour cell proliferation through p38 MAPK activity and regulation of the DNA damage response
    • 10.1038/sj.onc.1210142 17160018
    • Ayllon V O'Connor R PBK/TOPK promotes tumour cell proliferation through p38 MAPK activity and regulation of the DNA damage response Oncogene 2007, 26(24):3451-3461. 10.1038/sj.onc.1210142 17160018
    • (2007) Oncogene , vol.26 , Issue.24 , pp. 3451-3461
    • Ayllon, V.1    O'Connor, R.2
  • 20
    • 34248146665 scopus 로고    scopus 로고
    • Attenuation of DNA damage checkpoint by PBK, a novel mitotic kinase, involves protein-protein interaction with tumor suppressor p53
    • 10.1016/j.bbrc.2007.04.125 17482142
    • Nandi AK Ford T Fleksher D Neuman B Rapoport AP Attenuation of DNA damage checkpoint by PBK, a novel mitotic kinase, involves protein-protein interaction with tumor suppressor p53 Biochem Biophys Res Commun 2007, 358(1):181-188. 10.1016/j.bbrc.2007.04.125 17482142
    • (2007) Biochem Biophys Res Commun , vol.358 , Issue.1 , pp. 181-188
    • Nandi, A.K.1    Ford, T.2    Fleksher, D.3    Neuman, B.4    Rapoport, A.P.5
  • 21
    • 0036731975 scopus 로고    scopus 로고
    • TrkA as a life and death receptor: Receptor dose as a mediator of function
    • 12208732
    • Yan C Liang Y Nylander KD Schor NF TrkA as a life and death receptor: receptor dose as a mediator of function Cancer Res 2002, 62(17):4867-4875. 12208732
    • (2002) Cancer Res , vol.62 , Issue.17 , pp. 4867-4875
    • Yan, C.1    Liang, Y.2    Nylander, K.D.3    Schor, N.F.4
  • 22
    • 0033003760 scopus 로고    scopus 로고
    • A Simple Statistical Parameter for Use in Evaluation and Validation of High Throughput Screening Assays
    • 10.1177/108705719900400206 10838414
    • Zhang JH Chung TD Oldenburg KR A Simple Statistical Parameter for Use in Evaluation and Validation of High Throughput Screening Assays J Biomol Screen 1999, 4(2):67-73. 10.1177/108705719900400206 10838414
    • (1999) J Biomol Screen , vol.4 , Issue.2 , pp. 67-73
    • Zhang, J.H.1    Chung, T.D.2    Oldenburg, K.R.3
  • 23
    • 33646033137 scopus 로고    scopus 로고
    • A lentiviral RNAi library for human and mouse genes applied to an arrayed viral high-content screen
    • 10.1016/j.cell.2006.01.040 16564017
    • Moffat J Grueneberg DA Yang X Kim SY Kloepfer AM Hinkle G Piqani B Eisenhaure TM Luo B Grenier JK et al.: A lentiviral RNAi library for human and mouse genes applied to an arrayed viral high-content screen Cell 2006, 124(6):1283-1298. 10.1016/j.cell.2006.01.040 16564017
    • (2006) Cell , vol.124 , Issue.6 , pp. 1283-1298
    • Moffat, J.1    Grueneberg, D.A.2    Yang, X.3    Kim, S.Y.4    Kloepfer, A.M.5    Hinkle, G.6    Piqani, B.7    Eisenhaure, T.M.8    Luo, B.9    Grenier, J.K.10
  • 24
    • 33747794587 scopus 로고    scopus 로고
    • Genome-scale loss-of-function screening with a lentiviral RNAi library
    • 10.1038/nmeth924 16929317
    • Root DE Hacohen N Hahn WC Lander ES Sabatini DM Genome-scale loss-of-function screening with a lentiviral RNAi library Nat Methods 2006, 3(9):715-719. 10.1038/nmeth924 16929317
    • (2006) Nat Methods , vol.3 , Issue.9 , pp. 715-719
    • Root, D.E.1    Hacohen, N.2    Hahn, W.C.3    Lander, E.S.4    Sabatini, D.M.5
  • 25
    • 41149091256 scopus 로고    scopus 로고
    • Transient transfection methods for preparation of high-titer retroviral supernatants
    • Chapter 9 Unit9.11 Unit9 11. 18265279
    • Pear W Transient transfection methods for preparation of high-titer retroviral supernatants Curr Protoc Mol Biol 2001, Chapter 9 Unit9.11 Unit9 11. 18265279
    • (2001) Curr Protoc Mol Biol
    • Pear, W.1
  • 27
    • 18244403744 scopus 로고    scopus 로고
    • Involvement of protein kinase PKN1 in G2/M delay caused by arsenite
    • 10.1002/mc.20087 15791647
    • Isagawa T Takahashi M Kato T Jr Mukai H Ono Y Involvement of protein kinase PKN1 in G2/M delay caused by arsenite Mol Carcinog 2005, 43(1):1-12. 10.1002/mc.20087 15791647
    • (2005) Mol Carcinog , vol.43 , Issue.1 , pp. 1-12
    • Isagawa, T.1    Takahashi, M.2    Kato Jr., T.3    Mukai, H.4    Ono, Y.5
  • 28
    • 34248597065 scopus 로고    scopus 로고
    • Differential regulation and properties of MAPKs
    • 10.1038/sj.onc.1210392 17496909
    • Raman M Chen W Cobb MH Differential regulation and properties of MAPKs Oncogene 2007, 26(22):3100-3112. 10.1038/sj.onc.1210392 17496909
    • (2007) Oncogene , vol.26 , Issue.22 , pp. 3100-3112
    • Raman, M.1    Chen, W.2    Cobb, M.H.3
  • 29
    • 2442593499 scopus 로고    scopus 로고
    • Therapeutic potential of inhibiting Bruton's tyrosine kinase, (BTK)
    • 10.2174/1381612043384475 15180538
    • Vassilev AO Uckun FM Therapeutic potential of inhibiting Bruton's tyrosine kinase, (BTK) Curr Pharm Des 2004, 10(15):1757-1766. 10.2174/ 1381612043384475 15180538
    • (2004) Curr Pharm Des , vol.10 , Issue.15 , pp. 1757-1766
    • Vassilev, A.O.1    Uckun, F.M.2
  • 30
    • 35248864084 scopus 로고    scopus 로고
    • Comprehensive expression profiling of tumor cell lines identifies molecular signatures of melanoma progression
    • 1895889 17611626 10.1371/journal.pone.0000594
    • Ryu B Kim DS Deluca AM Alani RM Comprehensive expression profiling of tumor cell lines identifies molecular signatures of melanoma progression PLoS ONE 2007, 2(7):e594. 1895889 17611626 10.1371/journal.pone.0000594
    • (2007) PLoS ONE , vol.2 , Issue.7
    • Ryu, B.1    Kim, D.S.2    Deluca, A.M.3    Alani, R.M.4
  • 31
    • 3242890471 scopus 로고    scopus 로고
    • siRNA Selection Server: An automated siRNA oligonucleotide prediction server
    • (Web Server) 441504 15215365 10.1093/nar/gkh366
    • Yuan B Latek R Hossbach M Tuschl T Lewitter F siRNA Selection Server: An automated siRNA oligonucleotide prediction server Nucleic Acids Res 2004, 32(Web Server):W130-134. 441504 15215365 10.1093/nar/gkh366
    • (2004) Nucleic Acids Res
    • Yuan, B.1    Latek, R.2    Hossbach, M.3    Tuschl, T.4    Lewitter, F.5
  • 32
    • 3242877996 scopus 로고    scopus 로고
    • Sfold web server for statistical folding and rational design of nucleic acids
    • (Web Server) 441587 15215366 10.1093/nar/gkh449
    • Ding Y Chan CY Lawrence CE Sfold web server for statistical folding and rational design of nucleic acids Nucleic Acids Res 2004, 32(Web Server):W135-141. 441587 15215366 10.1093/nar/gkh449
    • (2004) Nucleic Acids Res
    • Ding, Y.1    Chan, C.Y.2    Lawrence, C.E.3
  • 33
    • 0037134020 scopus 로고    scopus 로고
    • A system for stable expression of short interfering RNAs in mammalian cells
    • 10.1126/science.1068999 11910072
    • Brummelkamp TR Bernards R Agami R A system for stable expression of short interfering RNAs in mammalian cells Science 2002, 296(5567):550-553. 10.1126/science.1068999 11910072
    • (2002) Science , vol.296 , Issue.5567 , pp. 550-553
    • Brummelkamp, T.R.1    Bernards, R.2    Agami, R.3
  • 34
    • 0037089589 scopus 로고    scopus 로고
    • Short hairpin RNAs (shRNAs) induce sequence-specific silencing in mammalian cells
    • 152352 11959843 10.1101/gad.981002
    • Paddison PJ Caudy AA Bernstein E Hannon GJ Conklin DS Short hairpin RNAs (shRNAs) induce sequence-specific silencing in mammalian cells Genes Dev 2002, 16(8):948-958. 152352 11959843 10.1101/gad.981002
    • (2002) Genes Dev , vol.16 , Issue.8 , pp. 948-958
    • Paddison, P.J.1    Caudy, A.A.2    Bernstein, E.3    Hannon, G.J.4    Conklin, D.S.5
  • 35
    • 0032478271 scopus 로고    scopus 로고
    • A simplified system for generating recombinant adenoviruses
    • 19394 9482916 10.1073/pnas.95.5.2509
    • He TC Zhou S da Costa LT Yu J Kinzler KW Vogelstein B A simplified system for generating recombinant adenoviruses Proc Natl Acad Sci USA 1998, 95(5):2509-2514. 19394 9482916 10.1073/pnas.95.5.2509
    • (1998) Proc Natl Acad Sci USA , vol.95 , Issue.5 , pp. 2509-2514
    • He, T.C.1    Zhou, S.2    da Costa, L.T.3    Yu, J.4    Kinzler, K.W.5    Vogelstein, B.6
  • 36
    • 0032834927 scopus 로고    scopus 로고
    • Adenovirus vectors for gene delivery
    • 10.1016/S0958-1669(99)00007-5 10508634
    • Benihoud K Yeh P Perricaudet M Adenovirus vectors for gene delivery Curr Opin Biotechnol 1999, 10(5):440-447. 10.1016/S0958-1669(99)00007-5 10508634
    • (1999) Curr Opin Biotechnol , vol.10 , Issue.5 , pp. 440-447
    • Benihoud, K.1    Yeh, P.2    Perricaudet, M.3
  • 37
    • 33646839924 scopus 로고    scopus 로고
    • Cell adhesion profiling using extracellular matrix protein microarrays
    • 16629399
    • Kuschel C Steuer H Maurer AN Kanzok B Stoop R Angres B Cell adhesion profiling using extracellular matrix protein microarrays Biotechniques 2006, 40(4):523-531. 16629399
    • (2006) Biotechniques , vol.40 , Issue.4 , pp. 523-531
    • Kuschel, C.1    Steuer, H.2    Maurer, A.N.3    Kanzok, B.4    Stoop, R.5    Angres, B.6
  • 38
    • 35148845555 scopus 로고    scopus 로고
    • A novel strategy for mammalian cell surface glycome profiling using lectin microarray
    • 10.1093/glycob/cwm084 17693441
    • Tateno H Uchiyama N Kuno A Togayachi A Sato T Narimatsu H Hirabayashi J A novel strategy for mammalian cell surface glycome profiling using lectin microarray Glycobiology 2007, 17(10):1138-1146. 10.1093/glycob/ cwm084 17693441
    • (2007) Glycobiology , vol.17 , Issue.10 , pp. 1138-1146
    • Tateno, H.1    Uchiyama, N.2    Kuno, A.3    Togayachi, A.4    Sato, T.5    Narimatsu, H.6    Hirabayashi, J.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.