The polymorphisms of protein-tyrosine phosphatase receptor-type delta gene and its association with pediatric asthma in the Taiwanese population

European Journal of Human Genetics

Volumn 16, Issue 10, 2008, Pages 1283-1288

  Shyur, Shyh Dar ^a   Wang, Jiu Yao ^b   Lin, Cherry Guan Ju ^c   Hsiao, Ya Hsin ^c   Liou, Ya Huei ^c   Wu, Ying Jye ^c   Wu, Lawrence Shih Hsin ^c  

^a MACKAY MEMORIAL HOSPITAL   (Taiwan)

^b NATIONAL CHENG KUNG UNIVERSITY HOSPITAL   (Taiwan)

^c VITA GENOMICS INC   (Taiwan)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN TYROSINE PHOSPHATASE; PROTEIN TYROSINE PHOSPHATASE RECEPTOR DELTA; UNCLASSIFIED DRUG;

ALLERGIC ASTHMA; ARTICLE; ASTHMA; CHILD; CONTROLLED STUDY; GENE FREQUENCY; GENE LOCATION; GENETIC ASSOCIATION; GENETIC DIFFERENCE; GENETIC SUSCEPTIBILITY; GENETIC VARIABILITY; HAPLOTYPE; HUMAN; LINKAGE ANALYSIS; MAJOR CLINICAL STUDY; PRIORITY JOURNAL; PROMOTER REGION; SHORT TANDEM REPEAT; SINGLE NUCLEOTIDE POLYMORPHISM; TAIWAN;

ALLELES; ASIAN CONTINENTAL ANCESTRY GROUP; ASTHMA; CHILD; CHILD, PRESCHOOL; DEMOGRAPHY; GENETIC PREDISPOSITION TO DISEASE; HAPLOTYPES; HUMANS; HYPERSENSITIVITY; ODDS RATIO; PHENOTYPE; POLYMORPHISM, SINGLE NUCLEOTIDE; RECEPTOR-LIKE PROTEIN TYROSINE PHOSPHATASES, CLASS 2; REPRODUCIBILITY OF RESULTS; TAIWAN;

EID: 53249127047     PISSN: 10184813     EISSN: 14765438     Source Type: Journal    
DOI: 10.1038/ejhg.2008.79     Document Type: Article

References (20)

1. Wang JY, Lin CGJ, Bey MSJ et al: Discovery of genetic difference between asthmatic children with high IgE level and normal IgE level by whole genome linkage disequilibrium mapping using 763 autosomal STR markers. J Hum Genet 2005; 50: 249-258.
2. Hunter T: Signaling-2000 and beyond. Cell 2000; 100: 113-127.
3. Puilido R, Krueger NX, Serra-Pages C, Saito H, Streuli M: Molecular characterization of the human transmembrane protein-tyrosine phosphatase delta. Evidence for tissue-specific expression of alternative human transmembrane protein-tyrosine phosphatase delta isoforms. J Biol Chem 1995; 270: 6722-6728.
4. Burney PG, Luczynska C, Chinn S, Jarvis D: The European Community Respiratory Health Survey. Eur Respir J 1994; 5: 954-960.
5. Pearce N, Sunyer J, Cheng S et al: Comparison of asthma prevalence in the ISAAC and the ECRHS. ISAAC Steering Committee and the European Community Respiratory Health Survey. International Study of Asthma and Allergies in Childhood. Eur Respir J 2000; 16: 420-426.
6. Sham PC, Curtis D: Monte Carlo tests for associations between disease and alleles at highly polymorphic loci. Ann Hum Genet 1995; 59 97-105.
7. Gordon D, Finch SJ, Nothnagel M, Ott J: Power and sample size calculations for case-control genetic association tests when errors present: Application to single nucleotide polymorphisms. Hum Hered 2002; 54: 22-33.
8. Gordon D, Levenstien MA, Finch SJ, Ott J: Errors and linkage disequilibrium interact multiplicatively when computing sample sizes for genetic case - control association studies. Pac Symp Biocomput 2003; 490-501.
9. Mizuno K, Hasegawa K, Category T, Ogimoto M, Ichikawa T, Yakura H: MPTP delta, a putative murine homolog of HPTP delta, is expressed in specialized regions of the brain and in the B-cell lineage. Mol Cell Biol 1993; 13: 5513-5523.
10. Uetani N, Kato K, Ogura H et al: Impaired learning with enhanced hippocampal long-term potentiation in PTPdelta-deficient mice. EMBO J 2000; 19: 2775-2785.
11. Uetani N, Chagnon MJ, Kennedy TE, Iwakura Y, Tremblay ML: Mammalian motoneuron axon targeting requires receptor protein tyrosine phosphatases sigma and delta. J Neurosci 2006; 26: 5872-5880.
12. Nagayama K, Kohno T, Sato M, Arai Y, Minna JD, Yokota J: Homozygous deletion scanning of the lung cancer genome at a 100-kb resolution. Genes Chromosomes Cancer 2007; 46: 1000-1010.
13. Sato M, Takahashi K, Nagayama K et al: Identification of chromosome arm 9p as the most frequent target of homozygous deletions in lung cancer. Genes Chromosomes Cancer 2005; 44: 405-414.
14. Zhao X, Weir BA, LaFramboise T et al: Homozygous deletions and chromosome amplifications in human lung carcinomas revealed by single nucleotide polymorphism array analysis. Cancer Res 2005; 65: 5561-5570.
15. Purdie KJ, Lambert SR, Teh MT et al: Allelic imbalances and microdeletions affecting the PTPRD gene in cutaneous squamous cell carcinomas detected using single nucleotide polymorphism microarray analysis. Genes Chromosomes Cancer 2007; 46: 661-669.
16. Urushibara N, Karasaki H, Nakamura K, Mizuno Y, Ogawa K, Kikuchi K: The selective reduction in PTPdelta expression in hepatomas. Int J Oncol 1998; 12: 603-607.
17. Stark M, Hayward N: Genome-wide loss of heterozygosity and copy number analysis in melanoma using high-density single-nucleotide polymorphism arrays. Cancer Res 2007; 67: 2632-2642.
18. Stallings RL, Nair P, Maris JM et al: High-resolution analysis of chromosomal breakpoints and genomic instability identifies PTPRD as a candidate tumor suppressor gene in neuroblastoma. Cancer Res 2006; 66: 3673-3680.
19. Mustelin T, Vang T, Bottini N: Protein tyrosine phosphatases and the immune response. Nat Rev Immunol 2005; 5: 43-57.
20. Kimchi-Sarfaty C, Oh JM, Kim IW et al: A 'silent' polymorphism in the MDR1 gene changes substrate specificity. Science 2007; 315 525-528.