Identification of SCAR markers linked to or, a gene inducing beta-carotene accumulation in Chinese cabbage

Euphytica

Volumn 164, Issue 2, 2008, Pages 463-471

  Zhang, Fenglan ^a   Wang, Guochen ^a   Wang, Mei ^a   Liu, Xiucun ^a   Zhao, Xiuyun ^a   Yu, Yangjun ^a   Zhang, Deshuang ^a   Yu, Shuancang ^a  

^a BEIJING VEGETABLE RESEARCH CENTER   (China)

Author keywords

Chinese cabbage (Brassica rapa L. ssp. pekinensis); Gene mapping; Marker assisted selection; Orange head leaf gene (or); SCAR markers

Indexed keywords

BRASSICA RAPA; BRASSICA RAPA SUBSP. PEKINENSIS; BRASSICA RAPA SUBSP. RAPA;

EID: 53249111693     PISSN: 00142336     EISSN: 15735060     Source Type: Journal    
DOI: 10.1007/s10681-008-9721-6     Document Type: Article

References (32)

1. GS Ardiel TS Grewal P Deberdt BG Rossnagel GJ Scoles 2002 Inheritance of resistance to covered smut in barley and development of a tightly linked SCAR marker Theor Appl Genet 104 457 464 10.1007/s001220100696
2. C Asnaghi D Roques S Ruffel C Kaye JY Hoarau H Télismart JC Girard LM Raboin AM Risterucci L Grivet A D'Hont 2004 Targeted mapping of a sugarcane rust resistance gene (Bru1) using bulked segregant analysis and AFLP markers Theor Appl Genet 108 759 764 10.1007/s00122-003-1487-6
3. P Barret R Delourme N Foisset M Renard 1998 Development of a SCAR (Sequence characterized amplified region) marker for molecular tagging of the dwarf BREIZH (Bzh) gene in Brassica napus L. Theor Appl Genet 97 828 833 10.1007/s001220050962
4. N Chantret P Sourdille M Röder M Tavaud M Bernard G Doussinault 2000 Location and mapping of the powdery mildew resistance gene MlRE and detection of a resistance QTL by bulked segregant analysis (BSA) with microsatellites in wheat Theor Appl Genet 100 1217 1224 10.1007/s001220051427
5. FX Cunningham Jr E Gantt 1998 Genes and enzymes of carotenoid biosynthesis in plants Annu Rev Plant Physiol Plant Mol Biol 49 557 583 10.1146/annurev.arplant.49.1.557
6. FJ Gallego B Calles C Benito 1998 Molecular markers linked to the aluminium tolerance gene Alt1 in rye (Secale cereale L.) Theor Appl Genet 97 1104 1109 10.1007/s001220050997
7. DD Kosambi 1944 The estimation of map distance from recombination values Ann Eugen 12 172 175
8. L Li DF Garvin 2003 Molecular mapping of Or, a gene inducing beta-carotene accumulation in cauliflower (Brassica oleracea L. var. botrytis) Genome 46 588 594 10.1139/g03-043
9. L Li S Lu DM O'Halloran DF Garvin 2003 High-resolution genetic and physical mapping of the cauliflower high β-carotene gene Or (Orange) Mol Genet Genomics 270 132 138 10.1007/s00438-003-0904-5
10. L Li DJ Paolillo MV Parthasarathy EM DiMuzio DF Garvin 2001 A novel gene mutation that confers abnormal patterns of ß-carotene accumulation in cauliflower (Brassica oleracea var. botrytis) Plant J 26 59 67 10.1046/j.1365-313x.2001.01008.x
11. AJ Lowe C Moule M Trick KJ Edwards 2004 Efficient large-scale development of microsatellites for marker and mapping applications in Brassica crop species Theor Appl Genet 108 1103 1112 10.1007/s00122-003-1522-7
12. E Matsumoto C Yasui M Ohi M Tsukada 1998 Linkage analysis of RFLP markers for clubroot resistance and pigmentation in Chinese cabbage (Brassica rapa ssp. pekinensis) Euphytica 104 2 79 86 10.1023/A:1018370418201
13. RW Michelmore I Paran RV Kesseli 1991 Identification of marker linked to disease-resistance gene by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations Proc Natl Acad Sci USA 88 9828 9832 10.1073/pnas.88.21.9828
14. GJ Miftahudin JP Scoles JP Gustafson 2002 AFLP markers tightly linked to the aluminum-tolerance gene Alt3 in rye (Secale cereale L.) Theor Appl Genet 104 626 631 10.1007/s00122-001-0782-3
15. HG Murray WF Thompson 1980 Rapid isolation of high molecular weight plant DNA Nucleic Acids Res 8 4321 4325 10.1093/nar/8.19.4321
16. MS Negi M Devic M Delseny M Lakshmikumaran 2000 Identification of AFLP fragments linked to seed coat colour in Brassica juncea and conversion to a SCAR marker for rapid selection Theor Appl Genet 101 146 152 10.1007/s001220051463
17. T Ohmori M Murata F Motoyoshi 1996 Molecular characterization of RAPD and SCAR markers linked to the Tm-1 locus in tomato Theor Appl Genet 92 151 156 10.1007/BF00223369
18. I Paran RW Michelmore 1993 Development of reliable PCR-based markers linked to downy mildew resistance genes in lettuce Theor Appl Genet 85 985 993 10.1007/BF00215038
19. XY Piao YJ Park SR Choi CP Hong JY Park YS Choi 2002 Conversion of AFLP marker linked to clubroot resistance gene into SCAR marker J Kor Soc Hortic Sci 43 653 659
20. N Sardesai A Kumar K Rajyashri S Nair M Mohan 2002 Identification and mapping of an AFLP marker linked to Gm7, a gall midge resistance gene and its conversion to a SCAR marker for its utility in marker aided selection in rice Theor Appl Genet 105 691 698 10.1007/s00122-002-1035-9
21. X Shan TK Blake LE Talbert 1999 Conversion of AFLP markers to sequence-specific PCR markers in barley and wheat Theor Appl Genet 98 1072 1078 10.1007/s001220051169
22. TO Sobir M Murata F Motoyoshi 2000 Molecular characterization of the SCAR markers tightly linked to the Tm-2 locus of the genus Lycopersion Theor Appl Genet 101 64 69s 10.1007/s001220051450
23. JE Staub FC Serquen M Gupta 1996 Genetic markers, map construction, and their application in plant breeding HortScience 31 729 741
24. K Suwabe H Iketani T Nunome T Kage M Hirai 2002 Isolation and characterization of microsatellites in Brassica rapa L. Theor Appl Genet 104 1092 1098 10.1007/s00122-002-0875-7
25. K Suwabe H Tsukazaki H Iketani K Hatakeyama M Kondo M Fujimura 2006 Simple sequence repeat-based comparative genomics between Brassica rapa and Arabidopsis thaliana: The genetic origin of clubroot resistance Genetics 173 309 319 10.1534/genetics.104.038968
26. SD Tanksley ND Youmg AH Paterson MW Bonierbale 1989 RFLP mapping in plant breeding: new tools for an old science Biotechnology 7 257 264 10.1038/nbt0389-257
27. van Ooijen JW, Voorrips RE (2001) JoinMap version 3.0: software for the calculation of genetic linkage maps. CPRODLO, Wageningen. The Netherlands
28. P Vos R Hogers M Blecker M Rijans T Van de Lee M Hornes 1995 AFLP: a new technique for DNA fingerprinting Nucleic Acids Res 23 4407 4414 10.1093/nar/23.21.4407
29. Xu JB (1998) A new Chinese cabbage cultivar 'Beijing Orange' (97-8). China Vegetable (4):31 (in Chinese)
30. K Xu X Xu PC Ronald DJ Mackill 2000 A high-resolution linkage map of the vicinity of the rice submergence tolerance locus SUB1 Mol Gen Genet 263 681 709 10.1007/s004380051217
31. Y Zhang JR Stommel 2000 RAPD and AFLP tagging and mapping of Beta (B) and Beta modifier (MoB), two genes which influence ß-carotene accumulation in fruit of tomato (Lycopersicon esculentum Mill) Theor Appl Genet 100 368 375 10.1007/s001220050048
32. Zhang DS, Zhang FL, Xu JB (2003) Hereditary characteristics of heading and flower colors on Chinese cabbage. Acta Agric Boreali-Sinica 18(2):81-84 (in Chinese)