Post-translational regulation of the Arabidopsis circadian clock through selective proteolysis and phosphorylation of pseudo-response regulator proteins

Journal of Biological Chemistry

Volumn 283, Issue 34, 2008, Pages 23073-23083

  Fujiwara, Sumire ^a   Wang, Lei ^a   Han, Linqu ^a,c   Suh, Sung Suk ^a   Salomé, Patrice A ^b,d   McClung, C Robertson ^b   Somers, David E ^a,e  

^a OHIO STATE UNIVERSITY   (United States)

^b Dartmouth College   (United States)

^c UNIVERSITY OF MICHIGAN   (United States)

^d MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY   (Germany)

^e 054 Rightmire Hall ^*  (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CHEMICAL REACTIONS; CLOCKS; DEGRADATION; ENZYMES; PROTEINS;

ARABIDOPSIS; BIOCHEMICAL FUNCTIONS; BLUE LIGHTS; CIRCADIAN CLOCK CONTROLS; CIRCADIAN CLOCKS; IN VITRO; IN VIVO DEGRADATIONS; IN-VIVO; N TERMINUSES; OPTIMAL BINDINGS; RESPONSE REGULATORS; TRANSLATIONAL REGULATIONS; UBIQUITIN LIGASE;

PHOSPHORYLATION;

F BOX PROTEIN; PROTEIN PPR3; PROTEIN PPR5; PROTEIN TOC1; PSEUDORESPONSE REGULATOR PROTEIN; REGULATOR PROTEIN; UNCLASSIFIED DRUG; ARABIDOPSIS PROTEIN; PHOSPHATASE; PRR3 PROTEIN, ARABIDOPSIS; TOC1 PROTEIN, ARABIDOPSIS; TRANSCRIPTION FACTOR; ZTL PROTEIN, ARABIDOPSIS;

ARABIDOPSIS; ARTICLE; CIRCADIAN RHYTHM; GENE EXPRESSION REGULATION; NONHUMAN; PHYTOCHEMISTRY; PRIORITY JOURNAL; PROTEIN DEGRADATION; PROTEIN EXPRESSION; PROTEIN PHOSPHORYLATION; PROTEIN PROCESSING; BIOLOGICAL MODEL; CELL NUCLEUS; CHEMISTRY; METABOLISM; OSCILLOMETRY; PHOSPHORYLATION; PLANT PHYSIOLOGY; PROTEIN BINDING; PROTEIN TERTIARY STRUCTURE;

ARABIDOPSIS;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; CELL NUCLEUS; CIRCADIAN RHYTHM; GENE EXPRESSION REGULATION, PLANT; MODELS, BIOLOGICAL; OSCILLOMETRY; PHOSPHORIC MONOESTER HYDROLASES; PHOSPHORYLATION; PLANT PHYSIOLOGY; PROTEIN BINDING; PROTEIN PROCESSING, POST-TRANSLATIONAL; PROTEIN STRUCTURE, TERTIARY; TRANSCRIPTION FACTORS;

EID: 53149108244     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M803471200     Document Type: Article

References (60)

1. Johnson, C. H., and Kyriacou, C. (2005) in Endogenous Plant Rhythms (Hall, A., and McWatters, H., eds) pp. 237-260, Blackwell, Oxford
2. Dodd, A. N., Salathia, N., Hall, A., Kevei, E., Toth, R., Nagy, F., Hibberd, J. M., Millar, A. J., and Webb, A. A. (2005) Science 309, 630-633
3. Green, R. M., Tingay, S., Wang, Z. Y., and Tobin, E. M. (2002) Plant Physiol. 129, 576-584
4. Alabadi, D., Oyama, T., Yanovsky, M. J., Harmon, F. G., Mas, P., and Kay, S. A. (2001) Science 293, 880-883
5. Locke, J. C., Kozma-Bognar, L., Gould, P. D., Feher, B., Kevei, E., Nagy, F., Turner, M. S., Hall, A., and Millar, A. J. (2006) Mol. Syst. Biol. 2, 59
6. Zeilinger, M. N., Farre, E. M., Taylor, S. R., Kay, S. A., and Doyle, F. J., III (2006) Mol. Syst. Biol. 2, 58
7. Matsushika, A., Makino, S., Kojima, M., and Mizuno, T. (2000) Plant Cell Physiol. 41, 1002-1012
8. Yamamoto, Y., Sato, E., Shimizu, T., Nakamich, N., Sato, S., Kato, T., Tabata, S., Nagatani, A., Yamashino, T., and Mizuno, T. (2003) Plant Cell Physiol. 44, 1119-1130
9. Kaczorowski, K. A., and Quail, P. H. (2003) Plant Cell 15, 2654-2665
10. Michael, T. P., Salome, P. A., Yu, H. J., Spencer, T. R., Sharp, E. L., McPeek, M. A., Alonso, J. M., Ecker, J. R., and McClung, C. R. (2003) Science 302, 1049-1053
11. Salome, P. A., and McClung, C. R. (2005) Plant Cell 17, 791-803
12. Farre, E. M., Harmer, S. L., Harmon, F. G., Yanovsky, M. J., and Kay, S. A. (2005) Curr. Biol. 15, 47-54
13. Nakamichi, N., Kita, M., Ito, S., Sato, E., Yamashino, T., and Mizuno, T. (2005) Plant Cell Physiol. 46, 609-619
14. Nakamichi, N., Kita, M., Ito, S., Yamashino, T., and Mizuno, T. (2005) Plant Cell Physiol. 46, 686-698
15. Ito, S., Matsushika, A., Yamada, H., Sato, S., Kato, T., Tabata, S., Yamashino, T., and Mizuno, T. (2003) Plant Cell Physiol. 44, 1237-1245
16. Eriksson, M. E., Hanano, S., Southern, M. M., Hall, A., and Millar, A. J. (2003) Planta 218, 159-162
17. Harmer, S. L., Panda, S., and Kay, S. A. (2001) Annu. Rev. Cell Dev. Biol. 17, 215-253
18. Bell-Pedersen, D., Cassone, V. M., Earnest, D. J., Golden, S. S., Hardin, P. E., Thomas, T. L., and Zoran, M. J. (2005) Nat. Rev. Genet. 6, 544-556
19. Brunner, M., and Schafmeier, T. (2006) Genes Dev. 20, 1061-1074
20. Liu, Y. (2005) Methods Enzymol. 393, 379-393
21. Fang, Y., Sathyanarayanan, S., and Sehgal, A. (2007) Genes Dev. 21, 1506-1518
22. Godinho, S. I., Maywood, E. S., Shaw, L., Tucci, V., Barnard, A. R., Busino, L., Pagano, M., Kendall, R., Quwailid, M. M., Romero, M. R., O'neill, J., Chesham, J. E., Brooker, D., Lalanne, Z., Hastings, M. H., and Nolan, P. M. (2007) Science 316, 897-900
23. Siepka, S. M., Yoo, S. H., Park, J., Song, W., Kumar, V., Hu, Y., Lee, C., and Takahashi, J. S. (2007) Cell 129, 1011-1023
24. Ko, H. W., Jiang, J., and Edery, I. (2002) Nature 420, 673-678
25. Daniel, X., Sugano, S., and Tobin, E. M. (2004) Proc. Natl. Acad. Sci. U. S. A. 101, 3292-3297
26. Sugano, S., Andronis, C., Ong, M. S., Green, R. M., and Tobin, E. M. (1999) Proc. Natl. Acad. Sci. U. S. A. 96, 12362-12366
27. Sugano, S., Andronis, C., Green, R. M., Wang, Z. Y., and Tobin, E. M. (1998) Proc. Natl. Acad. Sci. U. S. A. 95, 11020-11025
28. David, K. M., Armbruster, U., Tama, N., and Putterill, J. (2006) FEBS Lett. 580, 1193-1197
29. Perales, M., Portoles, S., and Mas, P. (2006) Plant J. 46, 849-860
30. Song, H. R., and Carre, I. A. (2005) Plant Mol. Biol. 57, 761-771
31. Kim, W. Y., Geng, R., and Somers, D. E. (2003) Proc. Natl. Acad. Sci. U. S. A. 100, 4933-4938
32. Han, L., Mason, M., Risseeuw, E. P., Crosby, W. L., and Somers, D. E. (2004) Plant J. 40, 291-301
33. Mas, P., Kim, W. Y., Somers, D. E., and Kay, S. A. (2003) Nature 426, 567-570
34. Somers, D. E., Schultz, T. F., Milnamow, M., and Kay, S. A. (2000) Cell 101, 319-329
35. Kiba, T., Henriques, R., Sakakibara, H., and Chua, N. H. (2007) Plant Cell 19, 2516-2530
36. Curtis, M. D., and Grossniklaus, U. (2003) Plant Physiol. 133, 462-469
37. Bechtold, N., Ellis, J., and Pelletier, G. (1993) C. R. Acad. Sci. (Paris) 316, 1194
38. Ding, Z., Doyle, M. R., Amasino, R. M., and Davis, S. J. (2007) Genetics 176, 1501-1510
39. Somers, D. E., Kim, W. Y., and Geng, R. (2004) Plant Cell 16, 769-782
40. Guo, F. Q., Wang, R., Chen, M., and Crawford, N. M. (2001) Plant Cell 13, 1761-1777
41. Zachgo, S., Perbal, M. C., Saedler, H., and Schwarz-Sommer, Z. (2000) Plant J. 23, 697-702
42. Kim, W. Y., Fujiwara, S., Suh, S. S., Kim, J., Kim, Y., Han, L., David, K., Putterill, J., Nam, H. G., and Somers, D. E. (2007) Nature 449, 356-360
43. Matsushika, A., Murakami, M., Ito, S., Nakamichi, N., Yamashino, T., and Mizuno, T. (2007) Biosci. Biotechnol. Biochem. 71, 527-534
44. Farre, E. M., and Kay, S. A. (2007) Plant J. 52, 548-560
45. Ito, S., Nakamichi, N., Kiba, T., Yamashino, T., and Mizuno, T. (2007) Plant Cell Physiol. 48, 1644-1651
46. Strayer, C., Oyama, T., Schultz, T. F., Raman, R., Somers, D. E., Mas, P., Panda, S., Kreps, J. A., and Kay, S. A. (2000) Science 289, 768-771
47. Matsushika, A., Kawamura, M., Nakamura, Y., Kato, T., Murakami, M., Yamashino, T., and Mizuno, T. (2007) Biosci. Biotechnol. Biochem. 71, 535-544
48. Kevei, E., Gyula, P., Hall, A., Kozma-Bognar, L., Kim, W. Y., Eriksson, M. E., Toth, R., Hanano, S., Feher, B., Southern, M. M., Bastow, R. M., Viczian, A., Hibberd, V., Davis, S. J., Somers, D. E., Nagy, F., and Millar, A. J. (2006) Plant Physiol. 140, 933-945
49. Makino, S., Matsushika, A., Kojima, M., Yamashino, T., and Mizuno, T. (2002) Plant Cell Physiol. 43, 58-69
50. Ito, S., Niwa, Y., Nakamichi, N., Kawamura, H., Yamashino, T., and Mizuno, T. (2008) Plant Cell Physiol. 49, 201-213
51. Willems, A. R., Schwab, M., and Tyers, M. (2004) Biochim. Biophys. Acta 1695, 133-170
52. Smalle, J., and Vierstra, R. D. (2004) Annu. Rev. Plant Biol. 55, 555-590
53. Para, A., Farre, E. M., Imaizumi, T., Pruneda-Paz, J. L., Harmon, F. G., and Kay, S. A. (2007) Plant Cell 19, 3462-3473
54. Mizuno, T., and Nakamichi, N. (2005) Plant Cell Physiol. 46, 677-685
55. McClung, C. R. (2006) Plant Cell 18, 792-803
56. Sato, E., Nakamichi, N., Yamashino, T., and Mizuno, T. (2002) Plant Cell Physiol. 43, 1374-1385
57. Matsushika, A., Imamura, A., Yamashino, T., and Mizuno, T. (2002) Plant Cell Physiol. 43, 833-843
58. Dharmasiri, N., Dharmasiri, S., Jones, A. M., and Estelle, M. (2003) Curr. Biol. 13, 1418-1422
59. Ueguchi-Tanaka, M., Nakajima, M., Motoyuki, A., and Matsuoka, M. (2007) Annu. Rev. Plant Biol. 58, 183-198
60. Itoh, H., Sasaki, A., Ueguchi-Tanaka, M., Ishiyama, K., Kobayashi, M., Hasegawa, Y., Minami, E., Ashikari, M., and Matsuoka, M. (2005) Plant Cell Physiol. 46, 1392-1399