The diffusion of perturbations in a model of coupled random boolean networks

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 5191 LNCS, Issue , 2008, Pages 315-322

  Serra, Roberto ^a   Villani, Marco ^a   Damiani, Chiara ^a   Graudenzi, Alex ^a   Colacci, Annamaria ^b  

^a UNIVERSITY OF MODENA AND REGGIO EMILIA   (Italy)

^b Excellence Environmental Carcinogenesis   (Italy)

Author keywords

Cell criticality; Cellular automaton; Genetic network model; Interaction; Random Boolean network

Indexed keywords

BOOLEAN ALGEBRA; CELLS; CELLULAR AUTOMATA; CHLORINE COMPOUNDS; CYTOLOGY; DYNAMICS; FLAME RESISTANCE; FLOW INTERACTIONS; LARGE SCALE SYSTEMS; NEURAL NETWORKS; ORDER DISORDER TRANSITIONS; PATTERN RECOGNITION SYSTEMS; PERTURBATION TECHNIQUES; RANDOM PROCESSES; ROBOTS; SYSTEMS SCIENCE; TRANSLATION (LANGUAGES); VLSI CIRCUITS;

CELL-CRITICALITY; CELLULAR AUTOMATON; COMPLEX SYSTEMS; DEGREE OF ORDER; GENETIC NETWORK MODEL; GENETIC REGULATORY NETWORKS; INTERACTION; INTERNATIONAL CONFERENCES; RANDOM BOOLEAN NETWORK; RANDOM BOOLEAN NETWORKS; SIMPLIFIED MODELS;

AUTOMATA THEORY;

EID: 53049084454     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-540-79992-4_40     Document Type: Conference Paper

References (12)

1. Kauffman, S.A.: Gene regulation networks: A theory of their global structure and behaviour. Top. Dev. Biol. 6, 145-182 (1971)
2. Kauffman, S.A.: The origins of order. Oxford University Press, Oxford (1993)
3. Kauffman, S.A.: At home in the universe. Oxford University Press, Oxford (1995)
4. Serra, R., Villani, M., Semeria, A.: Genetic network models and statistical properties of gene expression data in knock-out experiments. J. Theor. Biol. 227, 149-157 (2004)
5. Serra, R., Villani, M., Graudenzi, A., Kauffman, S.A.: Why a simple model of genetic regulatory networks describes the distribution of avalanches in gene expression data. J. Theor. Biol. 246, 449-460 (2007)
6. Ramo, P., Kesseli, J., Yli-Harja, O.: Perturbation avalanches and criticality in gene regulatory networks. J. Theor. Biol. 242, 164-170 (2006)
7. Kauffman, S.A.: Investigations. Oxford University Press, Oxford (2000)
8. Harvey, I., Bossomaier, T.: Time out of joint: Attractors in asynchronous random Boolean networks. In: Husbands, P., Harvey, I. (eds.) Proceedings of the Fourth European Conference on Artificial Life (ECAL 1997), pp. 67-75. MIT Press, Cambridge (1997)
9. Aldana, M., Coppersmith, S., Kadanoff, L.: Boolean dynamics with random couplings. In: Kaplan, E., Marsden, J.E., Sreenivasan, K.R. (eds.) Perspectives and Problems in Nonlinear Science. Springer Applied Mathematical Sciences Series (2003)
10. Villani, M., Serra, R., Ingrami, P., Kauffman, S.A.: Coupled random Boolean network forming an artificial tissue. In: El Yacoubi, S., Chopard, B., Bandini, S. (eds.) ACRI 2006. LNCS, vol. 4173, pp. 548-556. Springer, Heidelberg (2006)
11. Bastolla, U., Parisi, G.: The modular structure of Kauffman networks. Physica D 185, 45-66 (2003)
12. Yacoubi, S.E., Chopard, S., Bandini, S.: ACRI 2006. LNCS, vol. 4173. Springer, Heidelberg (2006)