Phytophthora gallica sp. nov., a new species from rhizosphere soil of declining oak and reed stands in France and Germany

Mycological Research

Volumn 112, Issue 10, 2008, Pages 1195-1205

  Jung, Thomas ^a   Nechwatal, Jan ^b  

^a Phytophthora Research and Consultancy   (Germany)

^b UNIVERSITY OF KONSTANZ   (Germany)

Author keywords

Fagus sylvatica; Oomycota; Phragmites australis; Phytophthora taxon 'G'; Quercus robur

Indexed keywords

CLADISTICS; DECIDUOUS TREE; ECOLOGICAL IMPACT; FUNGUS; GRASS; GROWTH RATE; NEW SPECIES; POPULATION DECLINE; RHIZOSPHERE; ROOT COLONIZATION; SOIL ECOSYSTEM; TAXONOMY;

ARTICLE; CLASSIFICATION; CYTOLOGY; FRANCE; FUNGUS SPORE; GENETICS; GERMANY; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; OAK; PHYLOGENY; PHYTOPHTHORA; PLANT DISEASE; PLANT ROOT; POACEAE;

FRANCE; GERMANY; MOLECULAR SEQUENCE DATA; PHYLOGENY; PHYTOPHTHORA; PLANT DISEASES; PLANT ROOTS; POACEAE; QUERCUS; SOIL MICROBIOLOGY; SPORES, FUNGAL;

BODENSEE; CENTRAL EUROPE; EURASIA; EUROPE; FRANCE; WESTERN EUROPE;

ALNUS; ALNUS GLUTINOSA; FAGUS; FAGUS SYLVATICA; FRAXINUS; FRAXINUS EXCELSIOR; OOMYCETES; PHRAGMITES AUSTRALIS; PHYTOPHTHORA; PHYTOPHTHORA BOEHMERIAE; PHYTOPHTHORA GALLICA; PHYTOPHTHORA KERNOVIAE; QUERCUS ROBUR; SALIX; SALIX ALBA;

EID: 52949102902     PISSN: 09537562     EISSN: 14698102     Source Type: Journal    
DOI: 10.1016/j.mycres.2008.04.007     Document Type: Article

References (27)

1. Brasier C.M., and Jung T. Progress in understanding Phytophthora diseases of trees in Europe. In: McComb J.A., Hardy G., and Tommerup I. (Eds). Phytophthora in Forests and Natural Ecosystems. Proceedings of the 2nd International IUFRO Working Party 7.02.09 Meeting, 30 September-5 October 2001, Albany, Western Australia (2003), Murdoch University Print, Perth 4-18
2. Brasier C.M., and Jung T. Recent developments in Phytophthora diseases of trees and natural ecosystems in Europe. In: Brasier C.M., Jung T., and Osswald W. (Eds). Progress in Research on Phytophthora Diseases of Forest Trees. Proceedings of the 3rd International IUFRO Working Party 7.02.09 Meeting, 11-17 September 2004, Freising, Germany (2006), Forest Research, Farnham 5-16
3. Brasier C.M., Sanchez-Hernandez E., and Kirk S. Phytophthora inundata sp. nov., a part heterothallic pathogen of trees and shrubs in wet or flooded soils. Mycological Research 107 (2003) 477-484
4. Brasier C.M., Cooke D.E.L., Duncan J.M., and Hansen E.M. Multiple new phenotypic taxa from trees and riparian ecosystems in Phytophthora gonapodyides-P. megasperma ITS Clade 6, which tend to be high-temperature tolerant and either inbreeding or sterile. Mycological Research 107 (2003) 277-290
5. Brasier C.M., Beales P.A., Kirk S.A., Denman S., and Rose J. Phytophthora kernoviae sp. nov., an invasive pathogen causing bleeding stem lesions on forest trees and foliar necrosis of ornamentals in the UK. Mycological Research 109 (2005) 853-859
6. Brasier C.M., Kirk S.A., Delcan J., Cooke D.E.L., Jung T., and Man in't Veld W.A. Phytophthora alni sp. nov. and its variants: designation of emerging heteroploid hybrid pathogens spreading on Alnus trees. Mycological Research 108 (2004) 1172-1184
7. Brasier C.M., Robredo F., and Ferraz J.F.P. Evidence for Phytophthora cinnamomi involvement in Iberian oak decline. Plant Pathology 42 (1993) 140-145
8. Brasier C.M., Rose J., and Gibbs J.N. An unusual Phytophthora associated with older mortality in Britain. Plant Pathology 44 (1995) 999-1007
9. Brown A.V., and Brasier C.M. Colonization of tree xylem by Phytophthora ramorum, P. kernoviae and other Phytophthora species. Plant Pathology 56 (2007) 227-241
10. Cooke D.E.L., and Duncan J.M. Phylogenetic analysis of Phytophthora species based on ITS1 and ITS2 sequences of the ribosomal RNA gene repeat. Mycological Research 101 (1997) 667-677
11. Cooke D.E.L., Drenth A., Duncan J.M., Wagels G., and Brasier C.M. A molecular phylogeny of Phytophthora and related oomycetes. Fungal Genetics and Biology 30 (2000) 17-32
12. Erwin D.C., and Ribeiro O.K. Phytophthora Diseases Worldwide (1996), American Phytopathological Society Press, St Paul, MN
13. Felsenstein J. PHYLIP: phylogeny inference package. Version 3.5c (1993), Department of Genetics, University of Washington, Seattle
14. In: Gibbs J.N., van Dijk C., and Webber J.F. (Eds). Phytophthora disease of alder in Europe. Forestry Commission Bulletin 126 (2003) 1-82
15. Jung T., and Blaschke M. Phytophthora root and collar rot of alders in Bavaria: distribution, modes of spread, and possible management strategies. Plant Pathology 53 (2004) 197-208
16. Jung T., Cooke D.E.L., Blaschke H., Duncan J.M., and Osswald W. Phytophthora quercina sp. nov., causing root rot of European oaks. Mycological Research 103 (1999) 785-798
17. Jung T., Blaschke H., and Oßwald W. Involvement of Phytophthora species in Central European oak decline and the effect of site factors on the disease. Plant Pathology 49 (2000) 706-718
18. Jung T., Hansen E.M., Winton L., Oßwald W., and Delatour C. Three new species of Phytophthora from European oak forests. Mycological Research 106 (2002) 397-411
19. Jung T., Nechwatal J., Cooke D.E.L., Hartmann G., Blaschke M., Oßwald W., Duncan J.M., and Delatour C. Phytophthora pseudosyringae sp. nov., a new species causing root and collar rot of deciduous tree species in Europe. Mycological Research 107 (2003) 772-789
20. Jung T., Hudler G.W., Jensen-Tracy S.L., Griffiths H.M., Fleischmann F., and Oßwald W. Involvement of Phytophthora species in the decline of European beech in Europe and the USA. Mycologist 19 (2005) 159-166
21. Kroon L.P.N.M., Bakker F.T., van den Bosch G.B.M., Bonants P.J.M., and Flier W.G. Phylogenetic analysis of Phytophthora species based on mitochondrial and nuclear DNA sequences. Fungal Genetics and Biology 41 (2004) 766-782
22. Martin F.N., and Tooley P.W. Phylogenetic relationships among Phytophthora species inferred from sequence analysis of mitochondrially encoded cytochrome oxidase I and II genes. Mycologia 95 (2003) 269-284
23. Nechwatal J., and Mendgen K. Widespread detection of Phytophthora taxon salixsoil in the littoral zone of Lake Constance, Germany. European Journal of Plant Pathology 114 (2006) 261-264
24. Nechwatal J., Wielgoss A., and Mendgen K. Pythium phragmitis sp. nov., a new species close to P. arrhenomanes as a pathogen of common reed (Phragmites australis). Mycological Research 109 (2005) 1337-1346
25. Page R.D.M. TREEVIEW: an application to display phylogenetic trees on personal computers. Computer Application in the Biosciences 12 (1996) 357-358
26. Vettraino A.M., Morel O., Perlerou C., Robin C., Diamandis S., and Vannini A. Occurrence and distribution of Phytophthora species in European chestnut stands, and their association with Ink Disease and crown decline. European Journal of Plant Pathology 111 (2005) 169-180
27. Waterhouse G.M. Key to the species of Phytophthora de Bary. Mycological Papers 92 (1963) 1-22