Evaluation of microarray surfaces and arraying parameters for autoantibody profiling

Proteomics

Volumn 8, Issue 17, 2008, Pages 3443-3449

  Balboni, Imelda ^a,b   Limb, Cindy ^a   Tenenbaum, Jessica D ^c   Utz, Paul J ^a  

^a STANFORD UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b STANFORD UNIVERSITY   (United States)

^c DUKE UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Autoantibody profiling; Autoantigens; Autoimmune disease; Multiplexed proteomics technology; Protein microarrays

Indexed keywords

AMINO ACID; AUTOANTIBODY; AUTOANTIGEN; COMPLEMENTARY DNA; IMMUNOGLOBULIN G; IMMUNOGLOBULIN G ANTIBODY; IMMUNOGLOBULIN M; IMMUNOGLOBULIN M ANTIBODY; OLIGONUCLEOTIDE; POLYLYSINE; POLYMER; PROTEIN; SINGLE STRANDED DNA;

ANTIGEN SPECIFICITY; ARTICLE; AUTOIMMUNE DISEASE; AUTOIMMUNITY; CLINICAL LABORATORY; CONTROLLED STUDY; HUMAN; MICROARRAY ANALYSIS; PATHOGENESIS; PATIENT MONITORING; PRIORITY JOURNAL; PROTEIN MICROARRAY; PROTEOMICS; TECHNOLOGY;

ANIMALS; AUTOANTIBODIES; AUTOANTIGENS; AUTOIMMUNE DISEASES; HUMANS; PROTEIN ARRAY ANALYSIS;

EID: 52649112204     PISSN: 16159853     EISSN: 16159861     Source Type: Journal    
DOI: 10.1002/pmic.200800146     Document Type: Article

References (15)

1. Balboni, I., Chan, S. M., Kattah, M., Tenenbaum, J. D. et al., Multiplexed protein array platforms for analysis of autoimmune diseases. Annu. Rev. Immunol. 2006, 24, 391-418.
2. Robinson, W. H., DiGennaro, C., Hueber, W., Haab, B. B. et al., Autoantigen microarrays for multiplex characterization of autoantibody responses. Nat. Med. 2002, 8, 295-301.
3. Feng, Y., Ke, X., Ma, R., Chen, Y. et al., Parallel detection of autoantibodies with microarrays in rheumatoid diseases. Clin. Chem. 2004, 50, 416-422.
4. Li, Q. Z., Xie, C., Wu, T., Mackay, M. et al., Identification of autoantibody clusters that best predict lupus disease activity using glomerular proteome arrays. J. Clin. Invest. 2005, 115, 3428-3439.
5. Li, Q. Z., Zhou, J., Wandstrat, A. E., Carr-Johnson, F. et al., Protein array autoantibody profiles for insights into systemic lupus erythematosus and incomplete lupus syndromes. Clin. Exp. Immunol. 2007, 147, 60-70.
6. Hueber, W., Kidd, B. A., Tomooka, B. H., Lee, B. J. et al., Antigen microarray profiling of autoantibodies in rheumatoid arthritis. Arthritis. Rheum. 2005, 52, 2645-2655.
7. Hueber, W., Tomooka, B. H., Zhao, X., Kidd, B. A. et al., Proteomic analysis of secreted proteins in early rheumatoid arthritis: Anti-citrulline reactivity is associated with upregulation of proinflammatory cytokines. Ann. Rheum. Dis. 2007, 66, 712-719.
8. Quintana, F. J., Hagedorn, P. H., Elizur, G., Merbl, Y. et al., Functional immunomics: Microarray analysis of IgG autoantibody repertoires predicts the future response of mice to induced diabetes. Proc Natl. Acad. Sci. USA 2004, 101, 14615-14621.
9. Robinson, W. H., Fontoura, P., Lee, B. J., De Vegvar, H. E. et al., Protein microarrays guide tolerizing DNA vaccine treatment of autoimmune encephalomyelitis. Nat. Biotechnol. 2003, 21, 1033-1039.
10. Kanter, J. L., Narayana, S., Ho, P. P., Catz, I. et al., Lipid microarrays identify key mediators of autoimmune brain inflammation. Nat. Med. 2006, 12, 138-143.
11. Lueking, A., Huber, O., Wirths, C., Schulte, K. et al., Profiling of alopecia areata autoantigens based on protein microarray technology. Mol. Cell. Proteomics 2005, 4, 1382-1390.
12. Horn, S., Lueking, A., Murphy, D., Staudt, A. et al., Profiling humoral autoimmune repertoire of dilated cardiomyopathy (DCM) patients and development of a disease-associated protein chip. Proteomics 2006, 6, 605-613.
13. Angenendt, P., Glokler, J., Sobek, J., Lehrach, H., Cahill, D. J., Next generation of protein microarray support materials: Evaluation for protein and antibody microarray applications. J. Chromatogr. A 2003, 1009, 97-104.
14. Haab, B. B., Dunham, M. J., Brown, P. O., Protein microarrays for highly parallel detection and quantitation of specific proteins and antibodies in complex solutions. Genome Biol. 2001, 2, Research0004.0001-0004. 0013.
15. Kattah, M. G., Alemi, G. R., Thibault, D. L, Balboni, I., Utz, P. J., A new two-color Fab labeling method for autoantigen protein microarrays. Nat. Methods. 2006, 3, 745-751.