Querying and managing provenance through user views in scientific workflows

Proceedings - International Conference on Data Engineering

Volumn , Issue , 2008, Pages 1072-1081

  Biton, Olivier ^a   Cohen Boulakia, Sarah ^a,b   Davidson, Susan B ^a   Hara, Carmem S ^c  

^a UNIVERSITY OF PENNSYLVANIA   (United States)

^b UNIVERSITÉ PARIS SACLAY   (France)

^c FEDERAL UNIVERSITY OF PARANÁ   (Brazil)

Author keywords

[No Author keywords available]

Indexed keywords

BIOCOMMUNICATIONS; BIOINFORMATICS; CHLORINE COMPOUNDS; EXPERIMENTS; INFORMATION SCIENCE; TECHNOLOGY;

ABSTRACTION MECHANISMS; DATA ENGINEERING; INTERNATIONAL CONFERENCES; PERFORMANCE RESULTS; RELEVANT INFORMATION; SCIENTIFIC WORKFLOWS; WORK-FLOWS; WORKFLOW SYSTEMS;

MANAGEMENT;

EID: 52649110562     PISSN: 10844627     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/ICDE.2008.4497516     Document Type: Conference Paper

References (28)

1. S. Bowers and B. Ludäscher, "Actor-oriented design of scientific workflows," in Int. Conf. on Concept Modeling, 2005, pp. 369-384.
2. I. Foster, J. Vockler, M. Wilde, and Y. Zhao, "Chimera: A virtual data system for representing, querying, and automating data derivation," in SSDBM, 2002, pp. 37-46.
3. T. Oinn, M. Addis, J. Ferris, D. Marvin, M. Senger, R. Greenwood, K. Carver, M. G. Pocock, A. Wipat, and P. Li, "Taverna: a tool for the composition and enactment of bioinformatics workflows." Bioinformatics, vol. 20(1), pp. 3045-3054, 2003.
4. C. B. Medeiros, J. Perez-Ale azar, L. Digiampietri, J. G. Z. Pastorello, A. Santanche, R. S. Torres, E. Madeira, and E. Bacarin, "Woodss and the web: annotating and reusing scientific workflows," SIGMOD Rec., vol. 34, no. 3, pp. 18-23, 2005.
5. L. Moreau, "The first provenance challenge." 2006, http://twiki.ipaw.info/bin/view/Challenge/.
6. S. Cohen, S. Cohen-Boulakia, and S. Davidson, "Towards a model of provenance and user views in scientific workflows," in Data Integration in the Life Sciences, ser. LNBI, vol. 4075. Springer, 2006, pp. 264-279.
7. O. Benjelloun, A. D. Sarma, A. Halevy, and J. Widom, "ULDBs: Databases with Uncertainty and Lineage." in VLDB, 2006, pp. 953-964.
8. O. Biton, S. Cohen-Boulakia, and S. Davidson, "Querying and managing provenance through user views in scientific workflow systems," in U. of Penn., TR # MS-CIS-07-13, 2007.
9. O. Biton, S. Cohen-Boulakia, and S. B. Davidson, "Zoom* userviews: Querying relevant provenance in workflow systems," in VLDB (demo), 2007, pp. 1366-1369.
10. P. Buneman, A. Chapman, and J. Cheney, "Provenance management in curated databases," in SIGMOD, 2006, pp. 539-550.
11. W. van der Aalst et al., "Workflow patterns initiative." 2007, http://www.workflowpatterns.com/.
12. S. Bowers, T. M. McPhillips, B. Ludäscher, S. Cohen, and S. B. Davidson, "A model for user-oriented data provenance in pipelined scientific workflows." in IPAW, ser. LNCS, vol. 4145. Springer, 2006, pp. 133-147.
13. J. Zhao, C. Wroe, C. Goble, R. Stevens, D. Quan, and M. Greenwood, "Using semantic web technologies for representing e-science provenance" in ISWC, 2004, pp. 92-106.
14. D. Bhagwat, L. Chiticariu, W. Tan, and G. Vijayvargiya, "An annotation management system for relational databases," in VLDB, 2004, pp. 900-911.
15. P. Buneman, S. Khanna, and W. Tan, "Why and where: A characteriza tion of data provenance." in ICDT, 2001, pp. 316-330.
16. Y. Cui and J. Widom, "Lineage tracing for general data warehouse transformations," in VLDB. 2001, pp. 471-180.
17. ork: a workflow system supporting rule-based workflow adaptation." Data Knowl. Eng., vol. 51, no. 2, pp. 223-256, 2004.
18. M. Litzkow, M. Livny, and M. Mutka, "Condor - a hunter of idle workstations," in Proc. Conf. of Distributed Computing Systems, 1988.
19. Y. Simmhan, B. Piale, and D. Gannon, "A survey of data provenance in e-science." SIGMOD Rec. vol. 34(3), pp. 31-36, 2005.
20. R. Bose, I. Foster, and L. Moreau, "Report on the international provenance and annotation workshop." SIGMOD Rec., vol. 35(3), pp. 51-53, 2006.
21. D. Harel, "Statecharts: A visual formalism for complex systems." Science of Comp. Programming, vol. 8, pp. 231-274, 1987.
22. D. Liu and M. Franklin, "GridDB: A data-centric overlay for scientific grids," in VLDB, 2004, pp. 600-611.
23. R. S. Barga and L. A. Digiampietri, "Automatic generation of workflow provenance." in IPAW, ser. LNCS, vol. 4145. Springer, 2006, pp. 1-9.
24. S. Miles, P. Groth, M. Branco, and L. Moreau, "The requirements of recording and using provenance in e science experiments." Journal of Grid Computing, 2006.
25. V. Ctiristophides, R. Hull, and A. Kumar, "Querying and splicing of xml workflows." in Cooperative Inf. Systems, ser. LNCS, vol. 2172. Springer, 2001, pp. 386-402.
26. C. Beeri, A. Eyal, S. Kamenkovich, and T. Milo, "Querying business processes," in VLDB. 2006, pp. 343-354.
27. J. Freire, C. T. Silva, S. P. Callahan, E. Santos, C. E. Scheidegger, and H. T. Vo, "Managing rapidly-evolving scientific workflows." in IPAW, ser. LNCS, vol. 4145. Springer, 2006, pp. 10-18.
28. "BPEL. business process execution language for web services." http://www128.ibm.com/developerworks/library/specification/ws-bpel/.