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Volumn 22, Issue 4, 2008, Pages 555-563

Identification, characterisation and mapping of simple sequence repeat (SSR) markers from raspberry root and bud ESTs

Author keywords

EST SSRs; Expressed sequence tags; QTL; Raspberry; Rubus idaeus; Simple sequence repeats

Indexed keywords

BIOMARKERS; DIAGNOSIS; DNA SEQUENCES; GENES; KNOWLEDGE BASED SYSTEMS; PLANTS (BOTANY);

EID: 52449091755     PISSN: 13803743     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11032-008-9198-y     Document Type: Article
Times cited : (49)

References (20)
  • 2
    • 0025183708 scopus 로고
    • Basic local alignment search tool
    • SF Altschul W Gish W Miller 1990 Basic local alignment search tool Mol Biol 215 403 410
    • (1990) Mol Biol , vol.215 , pp. 403-410
    • Altschul, S.F.1    Gish, W.2    Miller, W.3
  • 3
    • 33646887380 scopus 로고    scopus 로고
    • Microsatellite markers for Fragaria from 'Strawberry Festival' ESTs
    • 10.1111/j.1471-8286.2006.01278.x
    • NV Bassil M Gunn K Folta K Lewers 2006 Microsatellite markers for Fragaria from 'Strawberry Festival' ESTs Mol Ecol Notes 6 473 476 10.1111/j.1471-8286.2006.01278.x
    • (2006) Mol Ecol Notes , vol.6 , pp. 473-476
    • Bassil, N.V.1    Gunn, M.2    Folta, K.3    Lewers, K.4
  • 4
    • 0034047693 scopus 로고    scopus 로고
    • Antioxidant properties of domesticated and wild Rubus species
    • 10.1002/1097-0010(200007)80:9<1307::AID-JSFA638>3.0.CO;2-P
    • N Deighton R Brennan C Finn HV Davies 2000 Antioxidant properties of domesticated and wild Rubus species J Sci Food Agric 80 1307 1313 10.1002/1097-0010(200007)80:9<1307::AID-JSFA638>3.0.CO;2-P
    • (2000) J Sci Food Agric , vol.80 , pp. 1307-1313
    • Deighton, N.1    Brennan, R.2    Finn, C.3    Davies, H.V.4
  • 6
    • 4544286405 scopus 로고    scopus 로고
    • The construction of a genetic linkage map of red raspberry (Rubus idaeus subsp. idaeus) based on AFLPs, genomic-SSR and EST-SSR markers
    • 10.1007/s00122-004-1687-8
    • J Graham K Smith K MacKenzie 2004 The construction of a genetic linkage map of red raspberry (Rubus idaeus subsp. idaeus) based on AFLPs, genomic-SSR and EST-SSR markers Theor Appl Genet 109 740 749 10.1007/s00122-004-1687-8
    • (2004) Theor Appl Genet , vol.109 , pp. 740-749
    • Graham, J.1    Smith, K.2    MacKenzie, K.3
  • 7
    • 33644754766 scopus 로고    scopus 로고
    • Mapping gene H controlling cane pubescence in raspberry and its association with resistance to cane botrytis and spur blight, rust and cane spot
    • 10.1007/s00122-005-0184-z
    • J Graham K Smith I Tierney 2006 Mapping gene H controlling cane pubescence in raspberry and its association with resistance to cane botrytis and spur blight, rust and cane spot Theor Appl Genet 112 818 831 10.1007/s00122-005-0184-z
    • (2006) Theor Appl Genet , vol.112 , pp. 818-831
    • Graham, J.1    Smith, K.2    Tierney, I.3
  • 8
    • 20444491651 scopus 로고    scopus 로고
    • Frequency, type distribution and annotation of simple sequence repeats in Rosaceae ESTs
    • 10.1007/s10142-005-0139-0
    • S Jung A Abbott C Jesudurai 2005 Frequency, type distribution and annotation of simple sequence repeats in Rosaceae ESTs Funct Integr Genomics 5 136 143 10.1007/s10142-005-0139-0
    • (2005) Funct Integr Genomics , vol.5 , pp. 136-143
    • Jung, S.1    Abbott, A.2    Jesudurai, C.3
  • 9
    • 33646889117 scopus 로고    scopus 로고
    • Identification and characterisation of simple sequence repeat (SSR) markers from Fragaria × ananassa expressed sequences
    • 10.1111/j.1471-8286.2005.01215.x
    • A Keniry CJ Hopkins E Jewell 2006 Identification and characterisation of simple sequence repeat (SSR) markers from Fragaria × ananassa expressed sequences Mol Ecol Notes 6 319 322 10.1111/j.1471-8286.2005.01215.x
    • (2006) Mol Ecol Notes , vol.6 , pp. 319-322
    • Keniry, A.1    Hopkins, C.J.2    Jewell, E.3
  • 10
    • 12744280883 scopus 로고    scopus 로고
    • Strawberry GenBank-derived and genomic simple sequence repeat (SSR) markers and their utility with strawberry, blackberry and red and black raspberry
    • KS Lewers SMN Styan SC Hokanson NV Bassil 2005 Strawberry GenBank-derived and genomic simple sequence repeat (SSR) markers and their utility with strawberry, blackberry and red and black raspberry J Am Soc Hortic Sci 130 102 115
    • (2005) J Am Soc Hortic Sci , vol.130 , pp. 102-115
    • Lewers, K.S.1    Styan, S.M.N.2    Hokanson, S.C.3    Bassil, N.V.4
  • 11
    • 34247180073 scopus 로고    scopus 로고
    • Co-ordinated gene expression during phases of dormancy release in raspberry (Rubus idaeus L.) buds
    • 10.1093/jxb/erl266
    • L Mazzitelli RD Hancock S Haupt 2007 Co-ordinated gene expression during phases of dormancy release in raspberry (Rubus idaeus L.) buds J Exp Bot 58 1035 1045 10.1093/jxb/erl266
    • (2007) J Exp Bot , vol.58 , pp. 1035-1045
    • Mazzitelli, L.1    Hancock, R.D.2    Haupt, S.3
  • 12
    • 0037196131 scopus 로고    scopus 로고
    • Anthocyanins, phenolics, and antioxidant capacity in diverse small fruits: Vaccinium, Rubus, and Ribes
    • 10.1021/jf011062r
    • RA Moyer KE Hummer CE Finn 2002 Anthocyanins, phenolics, and antioxidant capacity in diverse small fruits: Vaccinium, Rubus, and Ribes J Agric Food Chem 50 519 525 10.1021/jf011062r
    • (2002) J Agric Food Chem , vol.50 , pp. 519-525
    • Moyer, R.A.1    Hummer, K.E.2    Finn, C.E.3
  • 13
    • 34347324025 scopus 로고    scopus 로고
    • Inheritance of Phytophthora root rot resistance in red raspberry determined by generation means and molecular linkage analysis
    • 10.1007/s00122-007-0558-5
    • JA Pattison SK Samuelian CA Weber 2007 Inheritance of Phytophthora root rot resistance in red raspberry determined by generation means and molecular linkage analysis Theor Appl Genet 115 225 236 10.1007/s00122-007-0558-5
    • (2007) Theor Appl Genet , vol.115 , pp. 225-236
    • Pattison, J.A.1    Samuelian, S.K.2    Weber, C.A.3
  • 14
    • 0003709147 scopus 로고    scopus 로고
    • Code available at
    • Rozen S, Skaletsky HJ (1998) Primer 3. Code available at http:/www.genome.wi.mit.edu/genome_software/other/primer 3.html/
    • (1998) Primer 3
    • Rozen, S.1    Skaletsky, H.J.2
  • 15
    • 52449089589 scopus 로고    scopus 로고
    • Mapping resistance of red raspberry (Rubus idaeus subsp. idaeus) to virus diseases - Leaf spot (RSLV) and vein chlorosis (RVCV) on the genetic linkage map
    • AR Rusu D Pamfil J Graham 2006 Mapping resistance of red raspberry (Rubus idaeus subsp. idaeus) to virus diseases - leaf spot (RSLV) and vein chlorosis (RVCV) on the genetic linkage map Ser Zootehnie Biotehnologii 62 318 321
    • (2006) Ser Zootehnie Biotehnologii , vol.62 , pp. 318-321
    • Rusu, A.R.1    Pamfil, D.2    Graham, J.3
  • 16
    • 33947546013 scopus 로고    scopus 로고
    • Mapping of A1 conferring resistance to the aphid Amphorophora idaei and dw (dwarfing habit) in red raspberry (Rubus ideaus) using AFLP and microsatellite markers
    • 10.1186/1471-2229-7-15
    • DJ Sargent F Fernandez-Fernandez A Rys 2007 Mapping of A1 conferring resistance to the aphid Amphorophora idaei and dw (dwarfing habit) in red raspberry (Rubus ideaus) using AFLP and microsatellite markers BMC Plant Biol 7 15 10.1186/1471-2229-7-15
    • (2007) BMC Plant Biol , vol.7 , pp. 15
    • Sargent, D.J.1    Fernandez-Fernandez, F.2    Rys, A.3
  • 17
    • 24944491829 scopus 로고    scopus 로고
    • Simple sequence repeat markers for genetic mapping of raspberry and blackberry
    • ET Stafne JR Clark CA Weber 2005 Simple sequence repeat markers for genetic mapping of raspberry and blackberry J Am Soc Hortic Sci 130 722 728
    • (2005) J Am Soc Hortic Sci , vol.130 , pp. 722-728
    • Stafne, E.T.1    Clark, J.R.2    Weber, C.A.3
  • 19
    • 34447505044 scopus 로고    scopus 로고
    • Metabolomic approach to identifying bioactive compounds in berries: Advances toward fruit nutritional enhancement
    • 10.1002/mnfr.200700056
    • D Stewart GJ McDougall J Sungurtas 2007 Metabolomic approach to identifying bioactive compounds in berries: Advances toward fruit nutritional enhancement Mol Nutr Food Res 51 645 651 10.1002/mnfr.200700056
    • (2007) Mol Nutr Food Res , vol.51 , pp. 645-651
    • Stewart, D.1    McDougall, G.J.2    Sungurtas, J.3
  • 20
    • 0038143373 scopus 로고    scopus 로고
    • Development of EST-SSRs from the alpine lady-fern, Athyrium distentifolium
    • 10.1046/j.1471-8286.2003.00427.x
    • M Woodhead J Russell J Squirrell 2003 Development of EST-SSRs from the alpine lady-fern, Athyrium distentifolium Mol Ecol Notes 3 287 290 10.1046/j.1471-8286.2003.00427.x
    • (2003) Mol Ecol Notes , vol.3 , pp. 287-290
    • Woodhead, M.1    Russell, J.2    Squirrell, J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.