Anomalously increased lifetimes of biological complexes at zero force due to the protein-water interface

Journal of Physical Chemistry B

Volumn 112, Issue 36, 2008, Pages 11440-11445

  Pereverzev, Yuriy V ^a   Prezhdo, Oleg V ^a   Sokurenko, Evgeni V ^a  

^a UNIVERSITY OF WASHINGTON   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOCHEMISTRY; CHLORINE COMPOUNDS; COMPLEXATION; DROPS; FLOW INTERACTIONS; FLUID MECHANICS;

BOND LIFETIME; ENERGY-BARRIER; FORCE CONDITIONS; INTERACTION ENERGIES; INTERACTION OF WATER; PROTEIN INTERACTIONS; RECEPTOR LIGANDS; RECEPTOR-LIGAND BINDING; RECEPTOR-LIGAND COMPLEX; TENSILE FORCES; WATER INTERFACES;

LIGANDS;

EID: 52349124526     PISSN: 15206106     EISSN: None     Source Type: Journal    
DOI: 10.1021/jp803819a     Document Type: Article

References (33)

1. Fritz, J.; Katopodis, A. G.; Kolbinger, F.; Anselmetti, D. Proc. Natl. Acad. Sci.U.S.A. 1998, 95, 12283.
2. Phan, U. T.; Waldron, T. T.; Springer, T. A. Nat. Immunol. 2006, 8, 883.
3. Marshall, B. T.; Long, M.; Piper, J. W.; Yago, T.; McEver, R. P.; Zhu, C. Nature 2003, 423, 190.
4. Sarangapani, K. K.; Yago, T.; Klopocki, A. G.; Lawrence, M. B.; Fieger, C. B.; Rosen, S. D.; McEver, R. P.; Zhu, C. J. Biol. Chem. 2004, 279, 2291.
5. Merkel, R.; Nassoy, P.; Leung, A.; Richie, K.; Evans, E. Nature 1999, 397, 50.
6. Jung, L. S.; Nelson, K. E.; Stayton, P. S.; Campbell, C. T. Langmuir 2000, 16, 9421.
7. Guo, B.; Guilford, W. H. Proc. Natl. Acad. Sci. U.S.A. 2006, 103, 9844.
8. Chandler, D. Nature 2005, 437, 640.
9. Pangali, C.; Rao, M.; Berne, B. J. J. Chem. Phys. 1979, 71, 2981.
10. Vaitheeswaran, S.; Thirumalai, D. J. Am. Chem. Soc. 2006, 128, 13490.
11. Lum, K.; Chandler, D.; Weeks, J. D. J. Phys. Chem. 1999, 103, 4550.
12. Allemann, R. K.; Young, N. J.; Ma, S. H.; Truhlar, D. G.; Gao, J. L. J. Am. Chem. Soc. 2007, 129, 13008.
13. Papoian, G. A.; Ulander, J.; Wolynes, P. G. J. Am. Chem. Soc. 2003, 125, 9170.
14. Levy, Y.; Onuchic, J. N. Annu. Rev. Biophys. Biomol. Struct. 2006, 35, 389.
15. Gu, C. Ray, C. Guo, S.; Akhremitchev, B. B. J. Phys. Chem. C 2007, 111, 12898.
16. Ray, C. Brown, J. R.; Akhremitchev, B. B. J. Phys. Chem. B 2006, 110, 17578.
17. Paschall, C. D.; Guilford, W. H.; Lawrence, M. B. Biophys. J. 2008, 94, 1034.
18. Thomas, W. E.; Trinchina, E.; Forero, M.; Vogel, V.; Sokurenko, E. V. Cell 2002, 109, 913.
19. Evans, E.; Leung, A.; Heinrich, V.; Zhu, C. Proc. Natl. Acad. Sci. U.S.A. 2004, 101, 11281.
20. Barsegov, V.; Thirumalai, D. Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 1835.
21. Thomas, W.; Forero, M.; Yakovenko, O.; Nilsson, L.; Vicini, P.; Sokurenko, E.; Vogel, V. Biophys. J. 2006, 90, 753.
22. Pereverzev, Y. V.; Prezhdo, O. V.; Forero, M.; Sokurenko, E. V.; Thomas, W. E. Biophys. J. 2005, 89, 1446.
23. Pereverzev, Y. V.; Prezhdo, O. V. Phys. Rev. E 2006, 73, 050902.
24. Ainavarapu, S. R.; Li, L.; Badilla, C. L.; Fernandez, J. M. Biophys. J. 2005, 89, 3337.
25. Cao, Y.; Balamurali, M. M.; Sharma, D.; Li, H. Proc. Natl. Acad. Sci. U.S.A. 2007, 104, 15677.
26. Bell, G. I. Science 1978, 200, 618.
27. Zwanzig, R. Nonequilibrium Statistical Mechanics; Oxford: New York, 2001.
28. Cramer, C. J.; Truhlar, D. G. Chem. Rev. 1999, 99, 2161.
29. Raschke, T. M.; Levitt, M. Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 6777.
30. Weast, R. C., Ed. Handbook of Chemistry and Physics, 61st ed.; CRC Press: Boca Raton, FL, 1981.
31. Hornblower, B.; Coombs, A.; Whitaker, R. D.; Kolomeisky, A.; Picone, S. J.; Meller, A.; Akeson, M. Nat. Methods 2007, 4, 315.
32. Gore, J.; Bryant, Z.; Nollmann, M.; Le, M. U.; Cozzarelli, N. R.; Bustamante, C. Nature 2006, 442, 836.
33. Fisher, M. E.; Kolomeisky, A. B. Proc. Natl. Acad. Sci. U.S.A. 2001, 98, 7748.