A novel control software that improves the experimental workflow of scanning photostimulation experiments

Journal of Neuroscience Methods

Volumn 175, Issue 1, 2008, Pages 44-57

  Bendels, Michael H K ^a,b,c   Beed, Prateep ^a   Leibold, Christian ^b,c   Schmitz, Dietmar ^a,d   Johenning, Friedrich W ^a  

^a CHARITÉ UNIVERSITÄTSMEDIZIN BERLIN   (Germany)

^b UNIVERSITY OF MUNICH   (Germany)

^c LUDWIG MAXIMILIANS UNIVERSITY   (Germany)

^d HUMBOLDT UNIVERSITY   (Germany)

Author keywords

Entorhinal cortex; Functional anatomy; Photostimulation; Pyramidal cell; Stellate cell; Uncaging

Indexed keywords

ANIMAL CELL; ANIMAL TISSUE; ARTICLE; BRAIN NERVE CELL; COMPUTER PROGRAM; CONTROLLED STUDY; ENTORHINAL CORTEX; NONHUMAN; PHOTOSTIMULATION; PRIORITY JOURNAL; PYRAMIDAL NERVE CELL; RAT; STELLATE CELL;

ACTION POTENTIALS; ALGORITHMS; ANIMALS; ANIMALS, NEWBORN; BRAIN MAPPING; CEREBRAL CORTEX; GLUTAMATES; INDOLES; ISOQUINOLINES; MEMBRANE POTENTIALS; NEURONS; OPTICS AND PHOTONICS; PATCH-CLAMP TECHNIQUES; PHOTIC STIMULATION; PHOTOLYSIS; RATS; RATS, WISTAR; SOFTWARE; SYNAPTIC TRANSMISSION;

EID: 52049102655     PISSN: 01650270     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jneumeth.2008.08.010     Document Type: Article

References (34)

1. Agmon A., and Connors B.W. Thalamocortical responses of mouse somatosensory (barrel) cortex in vitro. Neuroscience 41 (1991) 365-379
2. Alle H., and Geiger J.R. Combined analog and action potential coding in hippocampal mossy fibers. Science 311 (2006) 1290-1293
3. Alonso A., and Klink R. Differential electroresponsiveness of stellate and pyramidal-like cells of medial entorhinal cortex layer II. J Neurophysiol 70 (1993) 128-143
4. Briggs F., and Callaway E.M. Laminar patterns of local excitatory input to layer 5 neurons in macaque primary visual cortex. Cereb Cortex 15 (2005) 479-488
5. Brivanlou I.H., Dantzker J.L., Stevens C.F., and Callaway E.M. Topographic specificity of functional connections from hippocampal CA3 to CA1. Proc Natl Acad Sci USA 101 (2004) 2560-2565
6. Bureau I., Shepherd G.M., and Svoboda K. Circuit and plasticity defects in the developing somatosensory cortex of FMR1 knock-out mice. J Neurosci 28 (2008) 5178-5188
7. Bureau I., von Saint Paul F., and Svoboda K. Interdigitated paralemniscal and lemniscal pathways in the mouse barrel cortex. PLoS Biol 4 (2006) e382
8. Callaway E.M., and Yuste R. Stimulating neurons with light. Curr Opin Neurobiol 12 (2002) 587-592
9. Clements J.D., and Bekkers J.M. Detection of spontaneous synaptic events with an optimally scaled template. Biophys J 73 (1997) 220-229
10. Dantzker J.L., and Callaway E.M. Laminar sources of synaptic input to cortical inhibitory interneurons and pyramidal neurons. Nat Neurosci 3 (2000) 701-707
11. Dodt H.U., Frick A., Kampe K., and Zieglgansberger W. NMDA and AMPA receptors on neocortical neurons are differentially distributed. Eur J Neurosci 10 (1998) 3351-3357
12. Frick A., Zieglgansberger W., and Dodt H.U. Glutamate receptors form hot spots on apical dendrites of neocortical pyramidal neurons. J Neurophysiol 86 (2001) 1412-1421
13. Godwin D.W., Che D., O'Malley D.M., and Zhou Q. Photostimulation with caged neurotransmitters using fiber optic lightguides. J Neurosci Methods 73 (1997) 91-106
14. Jin X., Prince D.A., and Huguenard J.R. Enhanced excitatory synaptic connectivity in layer v pyramidal neurons of chronically injured epileptogenic neocortex in rats. J Neurosci 26 (2006) 4891-4900
15. Kandler K., Katz L.C., and Kauer J.A. Focal photolysis of caged glutamate produces long-term depression of hippocampal glutamate receptors. Nat Neurosci 1 (1998) 119-123
16. Katz L.C., and Dalva M.B. Scanning laser photostimulation: a new approach for analyzing brain circuits. J Neurosci Methods 54 (1994) 205-218
17. Kötter R., Schubert D., Dyhrfjeld-Johnsen J., Luhmann H.J., and Staiger J.F. Optical release of caged glutamate for stimulation of neurons in the in vitro slice preparation. J Biomed Opt 10 (2005) 11003
18. Kudoh S.N., and Taguchi T. A simple exploratory algorithm for the accurate and fast detection of spontaneous synaptic events. Biosens Bioelectron 17 (2002) 773-782
19. Kumar S.S., Jin X., Buckmaster P.S., and Huguenard J.R. Recurrent circuits in layer II of medial entorhinal cortex in a model of temporal lobe epilepsy. J Neurosci 27 (2007) 1239-1246
20. Lam Y.-W., Nelson C.S., and Sherman S.M. Mapping of the functional interconnections between thalamic reticular neurons using photostimulation. J Neurophysiol 96 (2006) 2593-2600
21. Lester H.A., and Nerbonne J.M. Physiological and pharmacological manipulations with light flashes. Annu Rev Biophys Bioeng 11 (1982) 151-175
22. Losonczy A., and Magee J.C. Integrative properties of radial oblique dendrites in hippocampal CA1 pyramidal neurons. Neuron 50 (2006) 291-307
23. Marsal D. Die numerische Lösung partieller Differentialgleichungen in Wissenschaft und Technik (1976), Bibliographisches Institut, Mannheim, Germany
24. Matsuzaki M., Honkura N., Ellis-Davies G.C., and Kasai H. Structural basis of long-term potentiation in single dendritic spines. Nature 429 (2004) 761-766
25. Nikolenko V., Poskanzer K.E., and Yuste R. Two-photon photostimulation and imaging of neural circuits. Nat Methods 4 (2007) 943-950
26. Pouille F., and Scanziani M. Enforcement of temporal fidelity in pyramidal cells by somatic feed-forward inhibition. Science 293 (2001) 1159-1163
27. Schubert D., Kötter R., Luhmann H.J., and Staiger J.F. Morphology, electrophysiology and functional input connectivity of pyramidal neurons characterizes a genuine layer va in the primary somatosensory cortex. Cereb Cortex 16 (2006) 223-236
28. Schubert D., Kötter R., Zilles K., Luhmann H.J., and Staiger J.F. Cell type-specific circuits of cortical layer IV spiny neurons. J Neurosci 23 (2003) 2961-2970
29. Schubert D., Staiger J.F., Cho N., Kötter R., Zilles K., and Luhmann H.J. Layer-specific intracolumnar and transcolumnar functional connectivity of layer V pyramidal cells in rat barrel cortex. J Neurosci 21 (2001) 3580-3592
30. Shepherd G.M., Pologruto T.A., and Svoboda K. Circuit analysis of experience-dependent plasticity in the developing rat barrel cortex. Neuron 38 (2003) 277-289
31. Shoham S., O'Connor D.H., Sarkisov D.V., and Wang S.S.-H. Rapid neurotransmitter uncaging in spatially defined patterns. Nat Methods 2 (2005) 837-843
32. Steriade M. The Intact and Sliced Brain (2001), MIT Press, Cambridge, MA, USA
33. Steward O., and Scoville S.A. Cells of origin of entorhinal cortical afferents to the hippocampus and fascia dentata of the rat. J Comp Neurol 169 (1976) 347-370
34. Witter M.P., and Moser E.I. Spatial representation and the architecture of the entorhinal cortex. Trends Neurosci 29 (2006) 671-678