Tests for gene clusters satisfying the generalized adjacency criterion

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 5167 LNBI, Issue , 2008, Pages 152-160

  Xu, Ximing ^a   Sankoff, David ^a  

^a UNIVERSITY OF OTTAWA   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

BIOCOMMUNICATIONS; BIOINFORMATICS; ERROR ANALYSIS; INFORMATION SCIENCE;

COMPUTATIONAL BIOLOGY; CUT-OFF; FIXED THRESHOLD; GENE CLUSTERING; GENE CONTENT; GENOME SIZES; LARGE CLUSTERS; LINEAR ORDERS; NULL HYPOTHESIS; NUMBER OF CLUSTERS; STATISTICAL PROPERTIES;

CHLORINE COMPOUNDS;

EID: 51849152433     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-540-85557-6_14     Document Type: Conference Paper

References (6)

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2. Durand, D., Sankoff, D.: Tests for gene clustering. Journal of Computational Biology 10, 453-482 (2003)
3. Hoberman, R., Sankoff, D., Durand, D.: The statistical analysis of spatially clustered genes under the maximum gap criterion. Journal of Computational Biology 12, 1081- 1100 (2005)
4. Wolfowitz, J.: Note on runs of consecutive elements. Annals of Mathematical Statistics 15, 97-98 (1944)
5. Xu, W., Alain, B., Sankoff, D.: Poisson adjacency distributions in genome comparison: multichromosomal, circular, signed and unsigned cases. Bioinformatics 24 (2008)
6. Zhu, Q., Adam, Z., Choi, V., Sankoff, D.: Generalized gene adjacencies, graph bandwidth and clusters in yeast evolution. In: Mandoiu, I., Sunderraman, R., Zelikovsky, A. (eds.) ISBRA 2008. LNCS (LNBI), vol. 4983, pp. 134-145. Springer, Heidelberg (2008)