Impact of Roundup on the marine microbial community, as shown by an in situ microcosm experiment

Aquatic Toxicology

Volumn 89, Issue 4, 2008, Pages 232-241

  Stachowski Haberkorn, Sabine ^a   Becker, Beatriz ^b   Marie, Dominique ^c   Haberkorn, Hansy ^a   Coroller, Louis ^a   de la Broise, Denis ^a  

^a UNIVERSITÉ DE BRETAGNE OCCIDENTALE   (France)

^b UNIVERSITÉ DE BREST   (France)

^c STATION BIOLOGIQUE DE ROSCOFF   (France)

Author keywords

Flow cytometry; Glyphosate; Marine microbial communities; Microcosm; TTGE

Indexed keywords

HERBICIDE; RIBOSOME DNA; SURFACE WATER;

CLUSTER ANALYSIS; COASTAL WATER; COMPARATIVE STUDY; DNA; ELECTROKINESIS; ENVIRONMENTAL DISTURBANCE; FLOW CYTOMETRY; GEL; GLYPHOSATE; MARINE ECOSYSTEM; MICROBIAL COMMUNITY; MICROCOSM; POLLUTION EFFECT; WATER CONTENT;

ARTICLE; CLUSTER ANALYSIS; COASTAL WATERS; FLOW CYTOMETRY; GEL ELECTROPHORESIS; GENE AMPLIFICATION; MARINE ENVIRONMENT; MICROCOSM; NONHUMAN; PRIORITY JOURNAL; TEMPERATURE DEPENDENCE;

ANIMALS; CHLOROPHYLL; DIATOMS; DINOFLAGELLIDA; DNA FINGERPRINTING; ELECTROPHORESIS, POLYACRYLAMIDE GEL; FLOW CYTOMETRY; GLYCINE; HERBICIDES; PHYTOPLANKTON; POLYMERASE CHAIN REACTION; SEAWATER; SYNECHOCOCCUS; WATER MICROBIOLOGY; WATER POLLUTANTS, CHEMICAL;

EID: 51749094152     PISSN: 0166445X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.aquatox.2008.07.004     Document Type: Article

References (65)

1. Bendtsen J., Gustafsson K.E., and Petersen J.K. Modelling vertical mixing in the surface boundary layer using artificial age tracers. J. Mar. Syst. 60 (2006) 115-128
2. Bérard A., Leboulanger C., and Pelte T. Tolerance of Oscillatoria limnetica Lemmermann to atrazine in natural phytoplankton populations and in pure culture: influence of season and temperature. Arch. Environ. Contam. Toxicol. 37 (1999) 472-479
3. Bernard L., Schäfer H., Joux F., Courties C., Muyzer G., and Lebaron P. Genetic diversity of total, active and culturable marine bacteria in coastal seawater. Aquat. Microb. Ecol. 23 (2000) 1-11
4. Burgeot T., Gagnaire B., Renault T., Haure J., Moraga D., David E., Boutet I., Sauriau P.G., Malet N., Bouchet V., Le Roux A., Lapègue S., Bouilly K., Le Moullac G., Arzul G., Knoery J., Quiniou F., Bacher C., and Soletchnik P. Summer mortality of Pacific oyster Crassostrea gigas. In: Samain J.F., and McCombie H. (Eds). The Morest Project (2007), Ifremer/Quæ, Versailles, France 107-151
5. Chesworth J.C., Donkin M.E., and Brown M.T. The interactive effects of the antifouling herbicides Irgarol 1051 and Diuron on the seagrass Zostera marina (L.). Aquat. Toxicol. 66 (2004) 293-305
6. Cid A., Herrero C., Torres E., and Abalde J. Copper toxicity on the marine microalgae Phaeodactylum tricornutum: effects on photosynthesis and related parameters. Aquat. Toxicol. 31 (1995) 165-174
7. Cid A., Fidalgo P., Herrero C., and Abalde J. Toxic action of copper on the membrane system of a marine diatom measured by flow cytometry. Cytometry 25 (1996) 32-36
8. Clarke K.R. Non-parametric multivariate analyses of changes in community structure. Aust. Ecol. 18 (1993) 117-143
9. de la Broise D., and Palenik B. Immersed in situ microcosms: a tool for the assessment of pollution impact on phytoplankton. J. Exp. Mar. Biol. Ecol. 341 (2007) 274-281
10. DeLorenzo M.E., Lauth J., Pennington P.L., Scott G.I., and Ross P.E. Atrazine effects on the microbial food web in tidal creek mesocosms. Aquat. Toxicol. 46 (1999) 241-251
11. DeLorenzo M.E., Scott G.I., and Ross P.E. Effects of the agricultural pesticides atrazine, deethylatrazine, endosulfan, and chlorpyrifos on an estuarine microbial food web. Environ. Toxicol. Chem. 18 (1999) 2824-2835
12. DeLorenzo M.E., Scott G.I., and Ross P.E. Toxicity of pesticides to aquatic microorganisms: a review. Environ. Toxicol. Chem. 20 (2001) 84-98
13. Diez B., Pedros-Alio C., Marsh T.L., and Massana R. Application of denaturing gradient gel electrophoresis (DGGE) to study the diversity of marine picoeukaryotic assemblages and comparison of DGGE with other molecular techniques. Appl. Environ. Microbiol. 67 (2001) 2942-2951
14. Dorigo U., Bourrain X., Bérard A., and Leboulanger C. Seasonal changes in the sensitivity of river microalgae to atrazine and isoproturon along a contamination gradient. Sci. Total Environ. 318 (2004) 101-114
15. el Fantroussi S., Verschuere L., Verstraete W., and Top E.M. Effect of phenylurea herbicides on soil microbial communities estimated by analysis of 16S rRNA gene fingerprints and community-level physiological profiles. Appl. Environ. Microbiol. 65 (1999) 982-988
16. Freuze I., Jadas-Hecart A., Royer A., and Communal P.Y. Influence of complexation phenomena with multivalent cations on the analysis of glyphosate and aminomethyl phosphonic acid in water. J. Chromatogr. A 1175 (2007) 197-206
17. Gatidou G., and Thomaidis N.S. Evaluation of single and joint toxic effects of two antifouling biocides, their main metabolites and copper using phytoplankton bioassays. Aquat. Toxicol. 85 (2007) 184-191
18. Giesy J.P., Dobson S., and Solomon K.R. Ecotoxicological risk assessment for Roundup herbicide. Rev. Environ. Contam. Toxicol. 167 (2000) 35-120
19. Hammer Ø, Harper D.A.T., Ryan F.P.D., 2001. PAST: Paleontological Statistics Software Package for Education and Data Analysis, vol. 4, no. 1. Palaeontologia Electronica, p. 9, http://palaeo-electronica.org/2001_1/past/issue1_01.htm.
20. Hasle G.R. The inverted microscope method. In: Sournia A. (Ed). Phytoplankton Manual (1978), UNESCO, Paris 88-96
21. Hofstraat J.W., van Zeijl W.J.M., de Vreeze M.E.J., Peeters J.C.H., Peperzak L., Colijn F., and Rademaker T.W.M. Phytoplankton monitoring by flow cytometry. J. Plankton Res. 16 (1994) 1197-1224
22. Jonker R.R., Meulemans J.T., Dubelaar G.B.J., Wilkins M.F., and Ringelberg J. Flow cytometry: a powerful tool in analysis of biomass distributions in phytoplankton. Water Sci. Technol. 32 (1995) 177-182
23. Kostanjsek R., Lapanje A., Drobne D., Nikcevic S., Perovic A., Zidar P., Štrus J., Hollert H., and Karaman G. Bacterial community structure analyses to assess pollution of water and sediments in the Lake Shkodra/Skadar Balkan Peninsula. Environ. Sci. Pollut. Res. 12 (2005) 361-368
24. Lage O.M., Sansonetty F., O'Connor J.E., and Parente A.M. Flow cytometric analysis of chronic and acute toxicity of copper(II) on the marine dinoflagellate Amphidinium carterae. Cytometry 44 (2001) 226-235
25. Leboulanger C., Rimet F., Hème de Lacotte M., and Bérard A. Effects of atrazine and nicosulfuron on freshwater microalgae. Environ. Int. 26 (2001) 131-135
26. Lehotay S.J., Harman-Fetcho J.A., and McConnell L.L. Agricultural pesticide residues in oysters and water from two Chesapeake bay tributaries. Mar. Pollut. Bull. 37 (1998) 32-44
27. Li H., Xiao T., Ding T., and Lu R. Effect of the Yellow Sea cold water mass (YSCWM) on distribution of bacterioplankton. Acta Ecol. Sin. 26 (2006) 1012-1019
28. Lund J.W.G., Kipling C., and Le Cren E.D. The inverted microscope method of estimating algal numbers and the statistical basis of estimations by counting. Hydrobiologia 11 (1958) 143-170
29. Marie D., Brussaard C., Partensky F., and Vaulot D. Flow cytometric analysis of phytoplankton, bacteria and viruses. Current Protocols in Cytometry (1999), John Wiley & Sons, Inc. pp. 11.11.1-11.11.15
30. Marie D., Zhu F., Balagué V., Ras J., and Vaulot D. Eukaryotic picoplankton communities of the Mediterranean Sea in summer assessed by molecular approaches (DGGE, TGGE, QPCR). FEMS Microbiol. Ecol. 55 (2006) 403-415
31. Massana R., and Jürgens K. Composition and population dynamics of planktonic bacteria and bacterivorous flagellates in seawater chemostat cultures. Aquat. Microb. Ecol. 32 (2003) 11-22
32. Murray A.E., Hollibaugh J.T., and Orrego C. Phylogenetic compositions of bacterioplankton from two California estuaries compared by denaturing gradient gel electrophoresis of 16S rDNA fragments. Appl. Environ. Microbiol. 62 (1996) 2676-2680
33. Muyzer G., de Waal E.C., and Uitterlinden A.G. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59 (1993) 695-700
34. Nilsen J.E.O., and Falck E. Variations of mixed layer properties in the Norwegian sea for the period 1948-1999. Prog. Oceanogr. 70 (2006) 58-90
35. Olson R.J., Chisholm S.W., Zettler E.R., and Armbrust E.V. Analysis of Synechococcus pigment types in the sea using single and dual beam flow cytometry. Deep Sea Res. 35 (1988) 425-440
36. Oros D.R., Jarman W.M., Lowe T., David N., Lowe S., and Davis J.A. Surveillance for previously unmonitored organic contaminants in the San Francisco estuary. Mar. Pollut. Bull. 46 (2003) 1102-1110
37. Partensky F., Blanchot J., Lantoine F., Neveux J., and Marie D. Vertical structure of picophytoplankton at different trophic sites of the tropical northeastern Atlantic Ocean. Deep Sea Res. 43 (1996) 1191-1213
38. Pesce S., Fajon C., Bardot C., Bonnemoy F., Portelli C., and Bohatier J. Effects of the phenylurea herbicide diuron on natural riverine microbial communities in an experimental study. Aquat. Toxicol. 78 (2006) 303-314
39. Pesce S., Fajon C., Bardot C., Bonnemoy F., Portelli C., and Bohatier J. Longitudinal changes in microbial planktonic communities of a French river in relation to pesticide and nutrient inputs. Aquat. Toxicol. 86 (2008) 352-360
40. Petersen D.G., Dahllof I., and Nielsen L.P. Effects of zinc pyrithione and copper pyrithione on microbial community function and structure in sediments. Environ. Toxicol. Chem. 23 (2004) 921-928
41. Rioboo C., Gonzalez O., Herrero C., and Cid A. Physiological response of freshwater microalga (Chlorella vulgaris) to triazine and phenylurea herbicides. Aquat. Toxicol. 59 (2002) 225-235
42. Rubio F., Veldhuis L.J., Clegg B.S., Fleeker J.R., and Hall J.C. Comparison of a direct ELISA and an HPLC method for glyphosate determinations in water. J. Agric. Food Chem. 51 (2003) 691-696
43. Rutten T.P.A., Sandee B., and Hofman A.R.T. Phytoplankton monitoring by high performance flow cytometry: a successful approach?. Cytometry 64A (2005) 16-26
44. Sabater C., and Carrasco J.M. Effects of pyridaphenthion on growth of five freshwater species of phytoplankton. A laboratory study. Chemosphere 44 (2001) 1775-1781
45. Sabater C., Cuesta A., and Carrasco R. Effects of bensulfuron-methyl and cinosulfuron on growth of four freshwater species of phytoplankton. Chemosphere 46 (2002) 953-960
46. Santin-Montanya I., Sandin-Espana P., Garcia Baudin J.M., and Coll-Morales J. Optimal growth of Dunaliella primolecta in axenic conditions to assay herbicides. Chemosphere 66 (2007) 1315-1322
47. Schäfer H., Bernard L., Courties C., Lebaron P., Servais P., Pukall R., Stackebrandt E., Trousselier M., Guindulain T., Vives-Rego J., and Muyzer G. Microbial community dynamics in Mediterranean nutrient-enriched seawater mesocosms: changes in the genetic diversity of bacterial populations. FEMS Microbiol. Ecol. 34 (2001) 243-253
48. Seguin F., Leboulanger C., Rimet F., Druart J.C., and Bérard A. Effects of atrazine and nicosulfuron on phytoplankton in systems of increasing complexity. Arch. Environ. Contam. Toxicol. 40 (2001) 198-208
49. Skark C., Zullei-Seibert N., Schottler U., and Schlett C. The occurrence of glyphosate in surface water. Int. J. Environ. Anal. Chem. 70 (1998) 93-104
50. Sokal R.R., and Rohlf F.J. Biometry: the principles and practice of statistics in biological research. 3rd ed. (1995), W.H. Freeman and Co., New York
51. Stauber J., and Adams M. Microalgal toxicity tests using flow cytometry. Small-Scale Freshwater Toxic. Invest. 1 (2005) 203-241
52. Steen R.J.C.A., van der Vart J., Hiep M., van Hattum B., Cofino W.P., and Brinkman U.A.T. Gross fluxes and estuarine behaviour of pesticides in the Scheldt Estuary (1995-1997). Environ. Pollut. 115 (2001) 65-79
53. Tsui M.T.K., and Chu L.M. Aquatic toxicity of glyphosate-based formulations: comparison between different organisms and the effects of environmental factors. Chemosphere 52 (2003) 1189-1197
54. Uehlinger V. Etude statistique des méthodes de dénombrement planctonique. Arch. Sci. 17 (1964) 11-223
55. Uysal Z., and Koksalan I. The annual cycle of Synechococcus (cyanobacteria) in the northern Levantine Basin shelf waters (Eastern Mediterranean). Mar. Ecol. 27 (2006) 187-197
56. van den Brink P.J., Hartgers E.M., Gylstra R., Bransen F., and Brock T.C.M. Effects of a mixture of two insecticides in freshwater microcosms. Part II. Responses Plankton Ecol. Risk Assess. Ecotoxicol. 11 (2002) 181-197
57. van Hannen E.J., van Agterveld M.P., Gons H.J., and Laanbroek H.J. Revealing genetic diversity of eukaryotic microorganisms in aquatic environments by denaturing gradient gel electrophoresis. J. Phycol. 34 (1998) 206-213
58. Ward D.M., Weller R., and Bateson M.M. 16S rRNA sequences reveal numerous uncultured microorganisms in a natural community. Nature 345 (1990) 63-65
59. Weiner J.A., DeLorenzo M.E., and Fulton M.H. Relationship between uptake capacity and differential toxicity of the herbicide atrazine in selected microalgal species. Aquat. Toxicol. 68 (2004) 121-128
60. Widenfalk A., Bertilsson S., Sundh I., and Goedkoop W. Effects of pesticides on community composition and activity of sediment microbes-responses at various levels of microbial community organization. Environ. Pollut. 152 (2008) 576-584
61. Woodburn A. Glyphosate: production, pricing and use worldwide. Pest Manage. Sci. 56 (2000) 309-312
62. Yasuno M., Asaka A., and Kono Y. Effects of pyraclofos (an organophosphorus insecticide) on nutrient enriched ecosystems. Chemosphere 27 (1993) 1813-1824
63. Yoshino K., Nishigaki K., and Husimi Y. Temperature sweep gel electrophoresis: a simple method to detect point mutations. Nucl. Acids Res. 19 (1991) 3153
64. Yu Y., Kong F., Wang M., Qian L., and Shi X. Determination of short-term copper toxicity in a multispecies microalgal population using flow cytometry. Ecotoxicol. Environ. Safety 66 (2007) 49-56
65. Zapata M., Rodríguez F., and Garrido J.L. Separation of chlorophylls and carotenoids from marine phytoplankton: a new HPLC method using a reversed phase C8 column and pyridine-containing mobile phases. Mar. Ecol. Prog. Ser. 195 (2000) 29-45