메뉴 건너뛰기




Volumn 3, Issue 8, 2008, Pages

A high-sensitivity method for detection and measurement of HMGB1 protein concentration by high-affinity binding to DNA hemicatenanes

Author keywords

[No Author keywords available]

Indexed keywords

APTAMER; DNA; HEMICATENANED DNA; HIGH MOBILITY GROUP B1 PROTEIN; PERCHLORIC ACID; POLYACRYLAMIDE; DNA BINDING PROTEIN;

EID: 51349091456     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0002855     Document Type: Article
Times cited : (29)

References (50)
  • 1
    • 0015857760 scopus 로고
    • A new group of chromatin-associated proteins with a high content of acidic and basic amino acids
    • Goodwin GH, Sanders C, Johns EW (1973) A new group of chromatin-associated proteins with a high content of acidic and basic amino acids. Eur J Biochem 38: 14-19.
    • (1973) Eur J Biochem , vol.38 , pp. 14-19
    • Goodwin, G.H.1    Sanders, C.2    Johns, E.W.3
  • 2
    • 0035281548 scopus 로고    scopus 로고
    • HMG1 and 2, and related 'architectural' DNA-binding proteins
    • Thomas JO, Travers AA (2001) HMG1 and 2, and related 'architectural' DNA-binding proteins. Trends Biochem Sci 26: 167-174.
    • (2001) Trends Biochem Sci , vol.26 , pp. 167-174
    • Thomas, J.O.1    Travers, A.A.2
  • 3
    • 34548549334 scopus 로고    scopus 로고
    • The HMG-box: A versatile protein domain occurring in a wide variety of DNA-binding proteins
    • Stros M, Launholt D, Grasser KD (2007) The HMG-box: a versatile protein domain occurring in a wide variety of DNA-binding proteins. Cell Mol Life Sci 64: 2590-2606.
    • (2007) Cell Mol Life Sci , vol.64 , pp. 2590-2606
    • Stros, M.1    Launholt, D.2    Grasser, K.D.3
  • 4
    • 33845894166 scopus 로고    scopus 로고
    • Interview with Dr. Heikki Rauvala regarding pivotal advance: Analysis of proinflammatory activity of highly purified eukaryotic recombinant HMGB1 (amphoterin). Interview by Marco E Bianchi
    • Rauvala H (2007) Interview with Dr. Heikki Rauvala regarding pivotal advance: analysis of proinflammatory activity of highly purified eukaryotic recombinant HMGB1 (amphoterin). Interview by Marco E Bianchi. J Leukoc Biol 81: 46-48.
    • (2007) J Leukoc Biol , vol.81 , pp. 46-48
    • Rauvala, H.1
  • 6
    • 17144376810 scopus 로고    scopus 로고
    • High-mobility group box 1 protein (HMGB1): Nuclear weapon in the immune arsenal
    • Lotze MT, Tracey KJ (2005) High-mobility group box 1 protein (HMGB1): nuclear weapon in the immune arsenal. Nat Rev Immunol 5: 331-342.
    • (2005) Nat Rev Immunol , vol.5 , pp. 331-342
    • Lotze, M.T.1    Tracey, K.J.2
  • 8
    • 33745461107 scopus 로고    scopus 로고
    • High-mobility group box 1 (HMGB1) protein: Friend and foe
    • Ulloa L, Messmer D (2006) High-mobility group box 1 (HMGB1) protein: friend and foe. Cytokine Growth Factor Rev 17: 189-201.
    • (2006) Cytokine Growth Factor Rev , vol.17 , pp. 189-201
    • Ulloa, L.1    Messmer, D.2
  • 10
    • 33750087536 scopus 로고    scopus 로고
    • HMGB1, a novel inflammatory cytokine
    • Yamada S, Maruyama I (2007) HMGB1, a novel inflammatory cytokine. Clin Chim Acta 375: 36-42.
    • (2007) Clin Chim Acta , vol.375 , pp. 36-42
    • Yamada, S.1    Maruyama, I.2
  • 11
    • 0034532366 scopus 로고    scopus 로고
    • Occurrence of amphoterin (HMG1) as an endogenous protein of human platelets that is exported to the cell surface upon platelet activation
    • Rouhiainen A, Imai S, Rauvala H, Parkkinen J (2000) Occurrence of amphoterin (HMG1) as an endogenous protein of human platelets that is exported to the cell surface upon platelet activation. Thromb Haemost 84: 1087-1094.
    • (2000) Thromb Haemost , vol.84 , pp. 1087-1094
    • Rouhiainen, A.1    Imai, S.2    Rauvala, H.3    Parkkinen, J.4
  • 12
    • 20144380566 scopus 로고    scopus 로고
    • Persistent elevation of high mobility group box-1 protein (HMGB1) in patients with severe sepsis and septic shock
    • Sunden-Cullberg J, Norrby-Teglund A, Rouhiainen A, Rauvala H, Herman G, et al. (2005) Persistent elevation of high mobility group box-1 protein (HMGB1) in patients with severe sepsis and septic shock. Crit Care Med 33: 564-573.
    • (2005) Crit Care Med , vol.33 , pp. 564-573
    • Sunden-Cullberg, J.1    Norrby-Teglund, A.2    Rouhiainen, A.3    Rauvala, H.4    Herman, G.5
  • 13
    • 0041441084 scopus 로고    scopus 로고
    • High mobility group protein 1 (HMGB1) quantified by ELISA with a monoclonal antibody that does not cross-react with HMGB2
    • Yamada S, Inoue K, Yakabe K, Imaizumi H, Maruyama I (2003) High mobility group protein 1 (HMGB1) quantified by ELISA with a monoclonal antibody that does not cross-react with HMGB2. Clin Chem 49: 1535-1537.
    • (2003) Clin Chem , vol.49 , pp. 1535-1537
    • Yamada, S.1    Inoue, K.2    Yakabe, K.3    Imaizumi, H.4    Maruyama, I.5
  • 16
    • 0024584528 scopus 로고
    • Specific recognition of cruciform DNA by nuclear protein HMG1
    • Bianchi ME, Beltrame M, Paonessa G (1989) Specific recognition of cruciform DNA by nuclear protein HMG1. Science 243: 1056-1059.
    • (1989) Science , vol.243 , pp. 1056-1059
    • Bianchi, M.E.1    Beltrame, M.2    Paonessa, G.3
  • 17
    • 0027216519 scopus 로고
    • The nonspecific DNA-binding and -bending proteins HMG1 and HMG2 promote the assembly of complex nucleoprotein structures
    • Paull TT, Haykinson MJ, Johnson RC (1993) The nonspecific DNA-binding and -bending proteins HMG1 and HMG2 promote the assembly of complex nucleoprotein structures. Genes Dev 7: 1521-1534.
    • (1993) Genes Dev , vol.7 , pp. 1521-1534
    • Paull, T.T.1    Haykinson, M.J.2    Johnson, R.C.3
  • 18
    • 0027359690 scopus 로고
    • High-mobility-group 1 protein mediates DNA bending as determined by ring closures
    • Pil PM, Chow CS, Lippard SJ (1993) High-mobility-group 1 protein mediates DNA bending as determined by ring closures. Proc Natl Acad Sci U S A 90: 9465-9469.
    • (1993) Proc Natl Acad Sci U S A , vol.90 , pp. 9465-9469
    • Pil, P.M.1    Chow, C.S.2    Lippard, S.J.3
  • 19
    • 0035946944 scopus 로고    scopus 로고
    • Structural requirements for cooperative binding of HMG1 to DNA minicircles
    • Webb M, Payet D, Lee KB, Travers AA, Thomas JO (2001) Structural requirements for cooperative binding of HMG1 to DNA minicircles. J Mol Biol 309: 79-88.
    • (2001) J Mol Biol , vol.309 , pp. 79-88
    • Webb, M.1    Payet, D.2    Lee, K.B.3    Travers, A.A.4    Thomas, J.O.5
  • 20
    • 0001779683 scopus 로고    scopus 로고
    • DNA loops and semicatenated DNA junctions
    • Gaillard C, Strauss F (2000) DNA loops and semicatenated DNA junctions. BMC Biochem 1: 1.
    • (2000) BMC Biochem , vol.1 , pp. 1
    • Gaillard, C.1    Strauss, F.2
  • 21
    • 2542459486 scopus 로고    scopus 로고
    • High affinity binding of proteins HMG1 and HMG2 to semicatenated DNA loops
    • Gaillard C, Strauss F (2000) High affinity binding of proteins HMG1 and HMG2 to semicatenated DNA loops. BMC Mol Biol 1: 1.
    • (2000) BMC Mol Biol , vol.1 , pp. 1
    • Gaillard, C.1    Strauss, F.2
  • 22
  • 24
    • 33750744401 scopus 로고    scopus 로고
    • DNA topology and genome organization in higher eukaryotes: A model
    • Gaillard C, Strauss F (2006) DNA topology and genome organization in higher eukaryotes: a model. J Theor Biol 243: 604-607.
    • (2006) J Theor Biol , vol.243 , pp. 604-607
    • Gaillard, C.1    Strauss, F.2
  • 26
    • 0028278444 scopus 로고
    • Association of poly(CA).poly(TG) DNA fragments into four-stranded complexes bound by HMG1 and 2
    • Gaillard C, Strauss F (1994) Association of poly(CA).poly(TG) DNA fragments into four-stranded complexes bound by HMG1 and 2. Science 264: 433-436.
    • (1994) Science , vol.264 , pp. 433-436
    • Gaillard, C.1    Strauss, F.2
  • 27
    • 0025144029 scopus 로고
    • Efficient large-scale purificasion of non-histone chromosomal proteins HMG1 and HMG2 by using Polybuffer-exchanger PBE94
    • Adachi Y, Mizuno S, Yoshida M (1990) Efficient large-scale purificasion of non-histone chromosomal proteins HMG1 and HMG2 by using Polybuffer-exchanger PBE94. J Chromatogr 530: 39-46.
    • (1990) J Chromatogr , vol.530 , pp. 39-46
    • Adachi, Y.1    Mizuno, S.2    Yoshida, M.3
  • 28
    • 0025176779 scopus 로고
    • Ethanol precipitation of DNA with linear polyacrylamide as carrier
    • Gaillard C, Strauss F (1990) Ethanol precipitation of DNA with linear polyacrylamide as carrier. Nucleic Acids Res 18: 378.
    • (1990) Nucleic Acids Res , vol.18 , pp. 378
    • Gaillard, C.1    Strauss, F.2
  • 29
    • 0001541077 scopus 로고
    • Density of perchloric acid solutions
    • Markham AE (1941) Density of perchloric acid solutions. J Amer Chem Soc 63: 874-875.
    • (1941) J Amer Chem Soc , vol.63 , pp. 874-875
    • Markham, A.E.1
  • 31
    • 51149088227 scopus 로고
    • Protein purification: Principles and practice
    • 3rd ed, New York
    • Scopes RK (1993) Protein purification: principles and practice, 3rd ed. Springer Science+Business Media: New York.
    • (1993) Springer Science+Business Media
    • Scopes, R.K.1
  • 32
    • 0027169842 scopus 로고
    • Amphoterin, the 30-kDA protein in a family of HMG1-type polypeptides. Enhanced expression in transformed cells, leading edge localization, and interactions with plasminogen activation
    • Parkkinen J, Raulo E, Merenmies J, Nolo R, Kajander EO, et al. (1993) Amphoterin, the 30-kDA protein in a family of HMG1-type polypeptides. Enhanced expression in transformed cells, leading edge localization, and interactions with plasminogen activation. J Biol Chem 268: 19726-19738.
    • (1993) J Biol Chem , vol.268 , pp. 19726-19738
    • Parkkinen, J.1    Raulo, E.2    Merenmies, J.3    Nolo, R.4    Kajander, E.O.5
  • 33
    • 0028937619 scopus 로고
    • Increased DNA-bending activity and higher affinity DNA binding of high mobility group protein HMG-1 prepared without acids
    • Wagner JP, Quill DM, Pettijohn DE (1995) Increased DNA-bending activity and higher affinity DNA binding of high mobility group protein HMG-1 prepared without acids. J Biol Chem 270: 7394-7398.
    • (1995) J Biol Chem , vol.270 , pp. 7394-7398
    • Wagner, J.P.1    Quill, D.M.2    Pettijohn, D.E.3
  • 34
    • 3042850403 scopus 로고    scopus 로고
    • Recombinant HMGB1 with cytokine-stimulating activity
    • Li J, Wang H, Mason JM, Levine J, Yu M, et al. (2004) Recombinant HMGB1 with cytokine-stimulating activity. J Immununol Methods 289: 211-223.
    • (2004) J Immununol Methods , vol.289 , pp. 211-223
    • Li, J.1    Wang, H.2    Mason, J.M.3    Levine, J.4    Yu, M.5
  • 35
    • 0035036205 scopus 로고    scopus 로고
    • Reduced fertility and spermatogenesis defects in mice lacking chromosomal protein Hmgb2
    • Ronfani L, Ferraguti M, Croci L, Ovitt CE, Scholer HR, et al. (2001) Reduced fertility and spermatogenesis defects in mice lacking chromosomal protein Hmgb2. Development 128: 1265-1273.
    • (2001) Development , vol.128 , pp. 1265-1273
    • Ronfani, L.1    Ferraguti, M.2    Croci, L.3    Ovitt, C.E.4    Scholer, H.R.5
  • 36
    • 0042237850 scopus 로고    scopus 로고
    • Hmgb3: An HMG-box family member expressed in primitive hematopoietic cells that inhibits myeloid and B-cell differentiation
    • Nemeth MJ, Curtis DJ, Kirby MR, Garrett-Beal LJ, Seidel NE, et al. (2003) Hmgb3: an HMG-box family member expressed in primitive hematopoietic cells that inhibits myeloid and B-cell differentiation. Blood 102: 1298-1306.
    • (2003) Blood , vol.102 , pp. 1298-1306
    • Nemeth, M.J.1    Curtis, D.J.2    Kirby, M.R.3    Garrett-Beal, L.J.4    Seidel, N.E.5
  • 37
    • 0038276946 scopus 로고    scopus 로고
    • Structural basis for the proinflammatory cytokine activity of high mobility group box 1
    • Li J, Kokkola R, Tabibzadeh S, Yang R, Ochani M, et al. (2003) Structural basis for the proinflammatory cytokine activity of high mobility group box 1. Mol Med 9: 37-45.
    • (2003) Mol Med , vol.9 , pp. 37-45
    • Li, J.1    Kokkola, R.2    Tabibzadeh, S.3    Yang, R.4    Ochani, M.5
  • 38
    • 2642553083 scopus 로고    scopus 로고
    • High-affinity binding of tumor-suppressor protein p53 and HMGB1 to hemicatenated DNA loops
    • Stros M, Muselikova-Polanska E, Pospisilova S, Strauss F (2004) High-affinity binding of tumor-suppressor protein p53 and HMGB1 to hemicatenated DNA loops. Biochemistry 43: 7215-7225.
    • (2004) Biochemistry , vol.43 , pp. 7215-7225
    • Stros, M.1    Muselikova-Polanska, E.2    Pospisilova, S.3    Strauss, F.4
  • 39
    • 1542297718 scopus 로고    scopus 로고
    • In vitro acetylation of HMGB-1 and -2 proteins by CBP: The role of the acidic tail
    • Pasheva E, Sarov M, Bidjekov K, Ugrinova I, Sarg B, et al. (2004) In vitro acetylation of HMGB-1 and -2 proteins by CBP: the role of the acidic tail. Biochemistry 43: 2935-2940.
    • (2004) Biochemistry , vol.43 , pp. 2935-2940
    • Pasheva, E.1    Sarov, M.2    Bidjekov, K.3    Ugrinova, I.4    Sarg, B.5
  • 40
    • 33847646297 scopus 로고    scopus 로고
    • DNA bending versus DNA end joining activity of HMGB1 protein is modulated in vitro by acetylation
    • Ugrinova I, Mitkova E, Moskalenko C, Pashev I, Pasheva E (2007) DNA bending versus DNA end joining activity of HMGB1 protein is modulated in vitro by acetylation. Biochemistry 46: 2111-2117.
    • (2007) Biochemistry , vol.46 , pp. 2111-2117
    • Ugrinova, I.1    Mitkova, E.2    Moskalenko, C.3    Pashev, I.4    Pasheva, E.5
  • 41
    • 34447523457 scopus 로고    scopus 로고
    • Post-translational methylation of high mobility group box 1 (HMGB1) causes its cytoplasmic localization in neutrophils
    • Ito I, Fukazawa J, Yoshida M (2007) Post-translational methylation of high mobility group box 1 (HMGB1) causes its cytoplasmic localization in neutrophils. J Biol Chem 282: 16336-16314.
    • (2007) J Biol Chem , vol.282 , pp. 16336-16314
    • Ito, I.1    Fukazawa, J.2    Yoshida, M.3
  • 42
    • 34247128758 scopus 로고    scopus 로고
    • Circulating high-mobility group box I (HMGB1) concentrations are elevated in both uncomplicated pneumonia and pneumonia with severe sepsis
    • Angus DC, Yang L, Kong L, Kellum JA, Delude RL, et al. (2007) Circulating high-mobility group box I (HMGB1) concentrations are elevated in both uncomplicated pneumonia and pneumonia with severe sepsis. Crit Care Med 35: 1061-1067.
    • (2007) Crit Care Med , vol.35 , pp. 1061-1067
    • Angus, D.C.1    Yang, L.2    Kong, L.3    Kellum, J.A.4    Delude, R.L.5
  • 43
    • 34247160928 scopus 로고    scopus 로고
    • High-mobility group box 1 (HMGB1) as a potential therapeutic target in sepsis-More questions than answers
    • Waterer GW (2007) High-mobility group box 1 (HMGB1) as a potential therapeutic target in sepsis-More questions than answers. Crit Care Med 35: 1205-1206.
    • (2007) Crit Care Med , vol.35 , pp. 1205-1206
    • Waterer, G.W.1
  • 44
    • 18444362106 scopus 로고    scopus 로고
    • Native versus recombinant high-mobility group B1 proteins: Functional activity in vitro
    • Zimmermann K, Volkel D, Pable S, Lindner T, Kramberger F, et al. (2004) Native versus recombinant high-mobility group B1 proteins: functional activity in vitro. Inflammation 28: 221 229.
    • (2004) Inflammation , vol.28 , pp. 221-229
    • Zimmermann, K.1    Volkel, D.2    Pable, S.3    Lindner, T.4    Kramberger, F.5
  • 46
    • 33845893860 scopus 로고    scopus 로고
    • Pivotal advance: Analysis of proinflammatory activity of highly purified eukaryotic recombinant HMGB1 (amphoterin)
    • Rouhiainen A, Tumova S, Valmu L, Kalkkinen N, Rauvala H (2007) Pivotal advance: analysis of proinflammatory activity of highly purified eukaryotic recombinant HMGB1 (amphoterin). J Leukoc Biol 81: 49-58.
    • (2007) J Leukoc Biol , vol.81 , pp. 49-58
    • Rouhiainen, A.1    Tumova, S.2    Valmu, L.3    Kalkkinen, N.4    Rauvala, H.5
  • 47
    • 34250837518 scopus 로고    scopus 로고
    • A novel role for HMGB1 in TLR9-mediated inflammatory responses to CpG-DNA
    • Ivanov S, Dragoi AM, Wang X, Dallacosta C, Louten J, et al. (2007) A novel role for HMGB1 in TLR9-mediated inflammatory responses to CpG-DNA. Blood 110: 1970-1981.
    • (2007) Blood , vol.110 , pp. 1970-1981
    • Ivanov, S.1    Dragoi, A.M.2    Wang, X.3    Dallacosta, C.4    Louten, J.5
  • 48
    • 42149192003 scopus 로고    scopus 로고
    • HMGB1 develops enhanced proinflammatory activity by binding to cytokines
    • Sha Y, Zmijewski J, Xu Z, Abraham E (2008) HMGB1 develops enhanced proinflammatory activity by binding to cytokines. J Immunol 180: 2531-2537.
    • (2008) J Immunol , vol.180 , pp. 2531-2537
    • Sha, Y.1    Zmijewski, J.2    Xu, Z.3    Abraham, E.4
  • 49
    • 36949030704 scopus 로고    scopus 로고
    • An overview of structural DNA nanotechnology
    • Seeman NC (2007) An overview of structural DNA nanotechnology. Mol Biotechnol 37: 246-257.
    • (2007) Mol Biotechnol , vol.37 , pp. 246-257
    • Seeman, N.C.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.