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Volumn , Issue , 2008, Pages

Impact of multicores on large-scale molecular dynamics simulations

Author keywords

[No Author keywords available]

Indexed keywords

COMPUTER NETWORKS; DATA STORAGE EQUIPMENT; DISTRIBUTED PARAMETER NETWORKS; MOLECULAR DYNAMICS; QUANTUM CHEMISTRY;

EID: 51249085243     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/IPDPS.2008.4536181     Document Type: Conference Paper
Times cited : (8)

References (18)
  • 1
    • 51249091010 scopus 로고    scopus 로고
    • Rev, available at
    • AMD Opteron Rev. F, details available at http://multicore.amd.com/
    • F, details
  • 2
    • 51249112276 scopus 로고    scopus 로고
    • AMD quad-core platform
    • AMD quad-core platform, http://multicore.amd.com/us-en/quadcore/
  • 3
    • 51249097316 scopus 로고    scopus 로고
    • Available from
    • Cray XT Systems. Available from: http://info.nccs.gov/resources/jaguar.
    • Cray XT Systems
  • 4
    • 51249109115 scopus 로고    scopus 로고
    • IBM Blue Gene/P system, http://www-03.ibm.com/servers/deepcomputing/ bluegene.html
    • IBM Blue Gene/P system, http://www-03.ibm.com/servers/deepcomputing/ bluegene.html
  • 5
    • 51249096341 scopus 로고    scopus 로고
    • LAMMPS Molecular Dynamics Simulator
    • LAMMPS Molecular Dynamics Simulator, http://lammps.sandia.gov/
  • 6
    • 84901172341 scopus 로고    scopus 로고
    • MD benchmarks for AMBER
    • MD benchmarks for AMBER, CHARMM and NAMD, http://amber.scripps.edu/ amber8.bench2.html
    • CHARMM and NAMD
  • 12
    • 84986512474 scopus 로고
    • CHARMM: A Program for Macromolecular Energy, Minimization, and Dynamics Calculations
    • B. R. Brooks, R. E. Bruccoleri, et al., (1983) "CHARMM: A Program for Macromolecular Energy, Minimization, and Dynamics Calculations", J. Comp. Chem., 4, 187-217.
    • (1983) J. Comp. Chem , vol.4 , pp. 187-217
    • Brooks, B.R.1    Bruccoleri, R.E.2
  • 13
    • 23444454552 scopus 로고    scopus 로고
    • The Amber Bio-molecular Simulation Programs
    • D. Case, et. al., "The Amber Bio-molecular Simulation Programs," J. of Comp. Chemistry: 1668-1688, 2005.
    • (2005) J. of Comp. Chemistry , vol.1668-1688
    • Case, D.1    et., al.2
  • 14
    • 0031334264 scopus 로고    scopus 로고
    • Adventures in Improving the Scaling and Accuracy of Parallel Molecular Dynamics Program
    • M. Crowley, et. al., "Adventures in Improving the Scaling and Accuracy of Parallel Molecular Dynamics Program," J. of Supercomputing, 11, 1997.
    • (1997) J. of Supercomputing , vol.11
    • Crowley, M.1    et., al.2
  • 17
    • 0002467378 scopus 로고
    • Fast Parallel Algorithms for Short-Range Molecular Dynamics
    • S. J. Plimpton (1995), "Fast Parallel Algorithms for Short-Range Molecular Dynamics", J. Comp. Phys., 117, 1-19; http://www.cs.sandia.gov/ ~sjplimp/lammps.html
    • (1995) J. Comp. Phys , vol.117 , pp. 1-19
    • Plimpton, S.J.1
  • 18
    • 51249108027 scopus 로고    scopus 로고
    • R. M. Ramanthan, Intel Multi-core Processors: Making the move to Quad-core and Beyond, white paper available at http://www.intel.com/ technology/architecture/downloads/quad-core-06.pdf
    • R. M. Ramanthan, "Intel Multi-core Processors: Making the move to Quad-core and Beyond", white paper available at http://www.intel.com/ technology/architecture/downloads/quad-core-06.pdf


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.