Minimal paths and probabilistic models for origin-destination traffic estimation in live cell imaging

2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI

Volumn , Issue , 2008, Pages 843-846

  Pecot T ^a,b   Kervrann, C ^a,b   Bouthemy, P ^a  

^a INRIA   (France)

^b UR341 National Agronomical Research Institute (INRA)   (France)

Author keywords

Fluorescence; Microscopy; Proteins; Routing; Tracking; Traffic control (transportation); Video

Indexed keywords

MICROSCOPY; ROUTING; TRACKING; TRAFFIC CONTROL (TRANSPORTATION); VIDEO;

DIAGNOSTIC RADIOGRAPHY; DYNAMICS; FLUORESCENCE; FLUORESCENCE MICROSCOPY; IMAGE ANALYSIS; LIGHT EMISSION; LUMINESCENCE; MEDICAL IMAGING; MICROSCOPIC EXAMINATION; MOLECULAR DYNAMICS; PROTEINS; QUANTUM CHEMISTRY; TECHNICAL PRESENTATIONS; TOMOGRAPHY; TRAFFIC CONTROL; TRAFFIC SURVEYS;

COMPUTER NETWORKS;

EID: 51049120710     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/ISBI.2008.4541128     Document Type: Conference Paper

References (14)

1. I.F. Sbalzarini and P. Koumoutsakos, "Feature point tracking and trajectory analysis for video imaging in cell biology," J. Struct. Biol., vol. 151, pp. 182-195, 2005.
2. A. Genovesio, T. Liedl, V. Emiliani, W.J. Parak, M. Coppey-Moisan, and J.-C. Olivo-Marin, "Multiple particle tracking in 3D+t microscopy: Method and application to the tracking of endocytosed quantum dots," IEEE Trans. on IP, vol. 15, no. 5, pp. 1062-1070, 2006.
3. I. Smal, K. Draegestein, N. Galjart, W.J. Niessen, and E.H.W. Meijering, "Rao-blackwellized marginal particle filtering for multiple object tracking in molecular bioimaging," in Proc. of IPMI'07, 2007, pp. 110-121.
4. D. Thomann, J. Dorn, P.K. Sorger, and G. Danuser, "Automatic fluorescent tag localization ii: improvement in super-resolution by relative tracking," J. Microscopy, vol. 211, no. 3, pp. 230-248, 2003.
5. V. Racine,M. Saschse, J. Salamero, V. Fraisier, A. Trubuil, and J.B. Sibarita, "Visualization and quantification of vesicle trafficking on a 3d cytoskeleton network in living cells," J. Microscopy, pp. 214-228, Mar. 2007.
6. S. Bonneau, M. Dahan, and L.D. Cohen, "Tracking single quantum dots in live cells with minimal paths," in Proc. of CVPR'05, 2005, vol. 3, pp. 141-141.
7. Y. Vardi, "Network tomography: Estimation source-destination traffic intensities from link data," J. Amer. Statist. Ass., vol. 91, no. 433, pp. 365-377, Mar. 1996.
8. J. E. Boyd, J. Meloche, and Y. Vardi, "Statistical tracking in video traffic surveillance," in Proc. of ICCV'99, 1999, vol. 1, pp. 163-168.
9. E. Cascetta and S. Nguyen, "A unified framework for estimating or updating origin/destination matrices from traffic counts," Transportation Research, vol. 22, no. 6, pp. 437-455, 1988.
10. E.W. Dijkstra, "A note on two problems in connexion with graphs," Numerische Mathematik, vol. 1, no. 1, pp. 269-271, 1959.
11. J. Boulanger, C. Kervrann, and P. Bouthemy, "Estimation of dynamic background for fluorescence video-microscopy," in Proc. of ICIP'06, Atlanta, 2006.
12. C. Kervrann and A. Trubuil, "Optimal level curves and global minimizers of cost functionals in image segmentation," J. Math. Imag. Vis., vol. 17, pp. 153-174, 2002.
13. L.D. Cohen, "Minimal paths and fast marching methods for image analysis," Mathematical Models in Computer Vision: the Handbook, to appear.
14. T. Pécot, J. Boulanger, C. Kervrann, and P. Bouthemy, "Network tomography for trafficking simulation and analysis in fluorescence microscopy imaging," in Proc. of IEEE ISBI'07, Arlington, 2007, pp. 268-271.